TCONS_00000982 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000982
Unique NameTCONS_00000982
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1835

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000982 ID=TCONS_00000982|Name=TCONS_00000982|organism=Clytia hemisphaerica|type=transcript|length=1835bp
NTTTGGCGTGGATCTCACAACAGTTCCATCGGTGCGACCGACCAAAGGAG
CGTCAACACAACAAGGCTCATCACCTACTGGTTTAAGAGAAGAAATCAAG
ATGACTGGAACGAACAATGAAAACTATGTGTTCGTTGAAACCGCTCTTCA
AAGACAAATTGAGGCCGCAGAAAAGAACACAGCTCATTACAAATTGATGG
GAAATTTAGATGCTGCCAAAAACTTTGAAATGTTGTTAAAGAACTCTCAG
AAAGACATAATGACGCTACAACAATACAAAGCAAATAAATCGCCCGTTCC
CAAATGCTTCTACGTCAAAAAGACCTTCCCCGTTACAAAGTCCAATCCAC
ATTTGAGTGATTCTGAATTAGAGATCACCGTGGTTCGATGTTTGAACGTA
CCGCTACAACAAGgctACCAACCAAAAGATATGTATACTTATGTCACTTG
TGAGATGGCCTATCCTACGGAGAAGCCGCAAACTGCAACAACGACCACCA
TCAAAGAAACCATAAACCCTGaataCAACGGTGTTTTCAAAGTGCTTATT
GATCGCAAGCAAAGTGCTTTTAAAAGGTTTTGTAGGCGTGGCGTGGTCAA
CTTCAAATTATTTTATGTCAGAGGCTTTCTGAAGAGTGACAAAGCAATCG
GACAAGCGAGCGTCAAATTAACAGGATTCGCCAACAAATGTGAAATCCAC
GAATGTGTTGATATCGTCGACCTGGAGAAAGGTCGTAAAGCAATTGGTGG
GAAGATAGAAATCGTGCTCAAAATACGCGAACCTTTTGTAGACAAAGATA
CAGAGATTGTCAACGAGAAATGGTTGATATTAGATGCACATCTGCGCAAA
CTCGATATGaaaacccCATCAGCAATTCCTCAAGGAAAAGCCGTTAGCGC
ATACGAAAGTTTAGAAGTCATGAAATCTGAGAAATCGCTCTTTGAACGAC
AGGTAGCTGCTTACAAACAGCAAGGCAAACAACCTCCAACAGAGTTATTA
CATAAAATCAAATCTCACAACGAAAGTATGATAGCCATCCAAAATCGCCT
GAAACAAGGAGGAAAGCCAGCTGTTATAGAATATTTGAAGAATTTGGGTC
GTGGAGTAGAAGTGGAGATGAAGAACGCGCAAGTTGCTGCTAAAAAGAAC
GATGACAAAActgcaaaaaattgtttggttaaGAAGAAATTATTGGACAA
AGagATTGGAGTATTGAAACAAAGGCTGGGACTTTGATGAGATAAGTGGC
TTAAAGTTATTAccaatttatttttatacattTCTAGGAAAATacgaaat
attaaaaactaAAATGTATTATTTATGTACAAACTTGAAATAAGatcgga
aattttcaaaacgtatatggAATATTATCGTAAACTACAGAATATGCATC
GAAGATTTacaaaaatgttagattctGGCTGCCCGGTACACAAAAAACTC
TGTGAAATCTATTTTAAGATGCTCGGACCaatgaaaaatcatgaaaatag
tAACACGGTTTAGCAGTTGATACGTTGATGAATTTTTCAGCAAATTTCTT
CGCCCAACGTTCCAAATTTTATGGGTTATGCTTTCACAGTATTGTCAACA
TATTAATAATTCTTTACTCCACACACGACGTTTCATTTTCCAATTTGGTA
TTATATTTGTTGCCAGTTTTTTCTAAtcatttgtttatgtttattgTATT
GTAATTATCAATTGTTTATATGATATTGGAATAAATTTTCCGTCCGAACG
TCTTTTGTAGCGGACGGTAGTTATCACACATCGTCCCTTCTCGATTCACT
TTGGTCGATCGCAACTGCCGAAATTCTTGCAACTG
Run BLAST on NCBI

transcript from alignment at sc0000007:248251..258453+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000982 ID=TCONS_00000982|Name=TCONS_00000982|organism=Clytia hemisphaerica|type=transcript|length=10203bp|location=Sequence derived from alignment at sc0000007:248251..258453+ (Clytia hemisphaerica)
NTTTGGCGTGGATCTCACAACAGTACGTGATCCTCACTGAAAGCTTTTTT
GATCACTCATTAATTCATCTACCTTTCTTCAATATTTCTAGAAATCTTTT
ATGTGATAAAATAATCAAGTTGAAAGTTACGAAAATTATATGATAAGTTA
AAATTACCAATGACGACGAAAGTTCTAAGttgaaagttaaaaacatcGTG
ATGATGTACATGCTTTTGCCAATTTTAGGTTCCATCGGTGCGACCGACCA
AAGGAGCGTCAACACAACAAGGCTCATCACCTACTGGTTTAAGAGAAGAA
ATCAAGATGACTGGAACGAACAATGAAAACTATGTGTTCGTTGAAACCGC
TCTTCAAAGACAAATTGAGGTCAGTGCTTCTTTACCATTGTTACCTCACA
AAATTAAGTATTTTATTTCTTGACGGTGAAGTTCGTTTGATAAAGACGat
tgttttaagttttttaatttttcatacatAGGCCGCAGAAAAGAACACAG
CTCATTACAAATTGATGGGAAATTTAGATGCTGCCAAAAAGTAAGTTTTC
CAGCTTTTCCGGCTTCAACATTCTTCTGTATAAATATCAACGGTTTGATT
GATGTAATTTTACCTTGCAATTACataattctttttaatttctttcataG
CTTTGAAATGTTGTTAAAGAACTCTCAGAAAGACATAATGACGCTACAAC
AATACAAAGCAAATAAATCGCCCGTTCCCAAATGCTTCTACGTCAAAAAG
ACCTTCCCCGTTACAAAgtaattttttcttctctttggTTTACGGAATCA
GTAATATCTGATAGTGACTTGACAAAACTAGTCAGTTCTCGATGTAAGTG
CTTTTTTCACatgataaatttttcatttttcttacatACAGGTCCAATCC
ACATTTGAGTGATTCTGAATTAGAGATCACCGTGGTTCGATGTTTGAACG
TACCGCTACAACAAGGTGAGTGACAATGCTTTCTTTTGTTGAATGAACTT
CACTTCACTTTCTATTGATTTTTGAACTTTGCCTGGATGTCCACTTTGAC
TTTCGATTTCTCCGAACAACTCCTTACGTAAAAAGTCTCATCTTTTGTTT
AGACAACAACCActgctttttttttatttcaggctACCAACCAAAAGATA
TGTATACTTATGTCACTTNGTCAACACAACAAGGCTCATCACCTACTGGT
TTAAGAGAAGAAATCAAGATGACTGGAACGAACAATGAAAACTATGTGTT
CGTTGAAACCGCTCTTCAAAGACAAATTGAGGTCAGTGCTTCTTTACCAT
TGTTACCTCACAAAATTAAGTATTTTATTTCTTGACGGTGAAGTTCGTTT
GATAAAGACGattgttttaagttttttaatttttcatacatAGGCCGCAG
AAAAGAACACAGCTCATTACAAATTGATGGGAAATTTAGATGCTGCCAAA
AAGTAAGTTTTCCAGCTTTTCCGGCTTCAACATTCTTCTGTATAAATATC
AACGGTTTGATTGATGTAATTTTACCTTGCAATTACataattctttttaa
tttctttcataGCTTTGAAATGTTGTTAAAGAACTCTCAGAAAGACATAA
TGACGCTACAACAATACAAAGCAAATAAATCGCCCGTTCCCAAATGCTTC
TACGTCAAAAAGACCTTCCCCGTTACAAAgtaattttttcttctctttgg
TTTACGGAATCAGTAATATCTGATAGTGACTTGACAAAACTAGTCAGTTC
TCGATGTAAGTGCTTTTTTCACatgataaatttttcatttttcttacatA
CAGGTCCAATCCACATTTGAGTGATTCTGAATTAGAGATCACCGTGGTTC
GATGTTTGAACGTACCGCTACAACAAGGTGAGTGACAATGCTTTCTTTTG
TTGAATGAACTTCACTTCACTTTCTATTGATTTTTGAACTTTGCCTGGAT
GTCCACTTTGACTTTCGATTTCTCCGAACAACTCCTTGCGTAAAAAGTCT
CATCTTTTGTTTAGACAACAACCActgctttttttttatttcaggctACC
AACCAAAAGATATGTATACTTATGTCACTTGTGAGATGGCCTATCCTACG
GTATGTACTGTAATCATTCtttatattttatgattttgaaggttttataa
ATAACTGAAAATATGATTCATTTCCACCACCGTTCCCATTTGCATAACTg
cgatattttgaaaattcgaattCGTGTTCTCGGATCAAAATCCCAGTGTC
AAACTTTCAGAAATGTATTTGTGAAAAAGTTTCATaagttttctaaaaat
taaGTTAAGCCAAAACTTCAATAGATCTAACATCTAAATGCAGCTCTAAG
GGAGTATGGTGTGTACAATGCTATGTAATGATAGTAAGGAATGAAAGAAA
TGGTGCATAAGGGTTGCAAGGATTTTATTTATTCTATGAAAGTATTTAAA
GATTTGTGAACAATTATTGTCGTTGAGTTAGATCGATAACGACTGGTTGT
TGGTTGATGGCTGACAAGTTGGGAATGGGTGTGATGTTTCGTTTTGCTTG
TTTTCGTGGTCTTTGAATATATTGGGGGGTAGTATTTTGTTGATAAGCTT
GGGTGTAAATTCCTGATGGTTGAGGAATGTATGGAAAATAAGCGATATTT
TGTGTGGTGTTTTGTTGAGTCATCATTCGAGGGCGTTTATGATAGAAAGC
TGGGAAGACGATGTTGTTGCCAACATTGTGTCTTTTGCGAGAACGTAAAG
AAGCTATGTCATAGTATGGTTTGAGTGGATTGATTGGTCGAACAGGAGCT
GCGGGTTTTGGTGCAGGGGGTGTGATTTCTTTTGGTTTTTCGAACAAAGC
CTCAAACAGGTCCTCTTTGGAGGGCTTTGGTGTCACATCGTCATTTTGTG
TCACGCGTGACTTTTTGCAAGCTATTTGATCGCCAGAAGAAGATCTTTTT
GATCCAACTCGACGGAAGTTCAAAGAATCCGAAAATTCAGACAATTCTGT
ATTCAAAGCATCAGTTGAAGATGTAGTTTGGTTTTGTCCGCCAAGTGATG
GTTCTTGTGCGACTGCACTGTTGCATGTATCAAGGGGTTTTAGCTCTTTG
CTAAACAAACcatttgaattgcttttgagagATGCTTGTTGTGATGTCTT
TGGAATGACGTCATCTTTGGTTTGTTGAacaattttgattggttcatttG
GTTGATATCGTTCAAGATATCCTCTGCAAGCATCGAGTTGTGATtcttga
attttggtgaaattcTCCAAATCATCGAAACTAGAAAAGAGGAAAAGAGT
TGATCGAATTCTGAAATGATTTGgtggaaaatatttcaattcgatGTATG
AACAAGTTCAAAAAACGAACAACcactcaacaacaacaatacATCATTTG
AAATCGATTTCTTACCTTTCTTTTAGATATTGATAAATTGATTTTAATTC
GTTGATATCTTTGATACAGTCCAAACCTCCAtcaatttcttttaatttcC
GTTGGCAAATTTTATGGCGATCCCCAAAATCACGTGTCAAGTATTTTGCT
TCTTCGATCACCTGATTTAAATTCGCCAAGATTTTTTCTTGAGATGGCGA
AAGGTTTCTTCGGCCATTCTTCATCAAAGAAGAAACAATTTCTGCCGAAG
CAAATAAGTTGATTTGAATTTGTGTGATGTACGTATTCAAGTCGTTGTAT
CTAAAATTGGGGAAATAAGATCAgttataaacatcaaaacaccTTTTTAG
CGCTGACAGTCACTCCCTTTACTTCCCTTCTACATGTTTTTACATCTAAC
AGAATGATTTAGGGTTCAATNAAAACACCTTTTTGGCGCTGACAGTCACT
CCCTTTACTTCCCTTCTACATGTTTTACATCTAACAGAATGATTTAGGGT
TCAATGAAAAGTATGTAGATGAAATTTTACCTCTCTCGGAGATTTCTATA
TGCTTTTCGGACATCAGATCTCTTTGTGATGATATCTAAAAGAATATCTT
CTGCATCATCTTGTATCTGACTGCAAAACATGGGACCACAATATCGATAT
TGATCTTTGTTTCCAACTGCTTCGTCGATCAAATCTTTCAACTCGCCCCA
GGCTTTCGCGTTGTCGAATTTGGAATTCATTTTCAAGTTTCGACGAATTT
GGAACAAAAGGATGCACCAGAACAAATTTAGTATGCAAAACAATCCAATG
AAATAGTATTTCTCGCGAATAATCGAAAGAAATAGCGAGAGCTGATAAAA
CACAGCCACTCTTCAGAATCAAAATTCCTACctaaatttcatttcaacac
CGCGCGTGTTTTCTTAAAgcgaaaaaaatttgacgtcaatatTTTAATTG
ACGTCATTCAAGCTACATATCGACAGCAATGATGACGAAACCAAATGGTG
GAGAGGATTGTTCATTCTTGGAGACGCAAAGGGGATTTTGGACTTGGACT
TTTGGGGTTTCTAAGTAACTTTAGCTAATTAATTCCTGTGTCATATATTG
TCATATATTACACGATAAATTTCATATTCAGGAGAAGCCGCAAACTGCAA
CAACGACCACCATCAAAGAAACCATAAACCCTGGTGAGGACATTCGCTTC
GCTATGCTATGGGATTTTGGTGGAAGTTTGATTTAGATGTTGAAAAGATT
TTAGTTATTTATTAAGTTTTTTATGGGATTTTCCTGAGATTTTACCTTTA
TCTTTCTTGCACAGAGAAGCGTGTCAGCAATTTcgattttgctatttttt
ccctTGTAAAATTCCTGAGATTTGTCGAGTAACAATGCTCTGCTTTCTTA
TTTCAACATTCTTCATCATTCTGATTTCACACAATTCTGGTGACTTTAAT
CTGTTCACTATTATTTTCACTAATTGTTGCTAAGCTACTTTTTTTCCTGC
AATTCCTTTGGGCGTATTTTTCACTCCCTTTTGTCTCTTTCGACAAAGCT
AATCTTTCTtttcatatttcattttcagaataCAACGGTGTTTTCAAAGT
GCTTATTGATCGCAAGCAAAGTGCTTTTAAAAGGTTTTGTAGGCGTGGCG
TGGTCAACTTCAAATTATTTTATGTCAGGTAGGTGGAATGTTgagtctat
atattaatacgcttaaacgtgtgtgtttacaacattttgtaaaaagtttt
cgcaaatctaacaaagctctacaaagcctcctcttcatggcgttgaacca
tcatctttttgcaccctaagcagatttcctaccactagactaactttgag
accccaagatactattttctacTCACCAAGTCtttggagcttgatgggtt
aaaatcaaccatcttcccaatttttttttctcgttttaaagaattcttat
tcttaaaactttctgtttacaatagcggctccctatcactttcaaaactt
ttcaaagtctataaaagtcaccctcgaatgtccaaccacgatggctagcc
acgatggctaaaaagatctaaaatatatatacttttgctaagccatttat
ttaattgtggttaaaaattacaatgcaatgttatcttctttctcctttat
ttcttaaaatcaaaatcaaatcatcacTCGGCGGCTATCTTTCTTCCGtt
agaattttttagatgtgtagtgattcactggaatgggacacgcagcgtgc
gacgctgcgcatacggctagttgATTTTAAACGTTCTCAATTTACTAACT
ACAGTGCagtcataactcgaacacgaaCGGGGAATGCAataaacttgttc
gagttgtagaggttcgagttaaagagacgcCACTGTATAACCCATAGTGT
CCTAGTAGGTTGGTTCCCCaacttgaaaatcgaaaaaagtcCCTCTTTAG
TCCCCCCTaaggttttacaaaaaaatttccccTTTGAAAATTGTGTTAAA
CTTCTCACAAAACCCACATTTAGTATGGAAGTATTATTTTAAAAGAATAC
TATGTAACCAAAGAGAAAAAAGATATCGAAACTTGAATCGCATTGTATTT
GTCCATTAAACTGCTTGCTTTTTTCTGGTTGTAGAGGCTTTCTGAAGAGT
GACAAAGCAATCGGACAAGCGAGCGTCAAATTAACAGGATTCGCCAACAA
ATGTGAAATCCACGAATGTGTTGATGTAAGTtcgctttcattttcttctc
cTAAATCTCTTCAAACATTTCCAATCTAAATCGCTGGCCTGGGACATTCC
AAGACAGGACCACGATTCGCTATGCTTGTTCCTTTAATCTTACCCAtcca
attcaatttttcaatttctctaCATTTTTTCCGTAGATCGTCGACCTGGA
GAAAGGTCGTAAAGCAATTGGTGGGAAGATAGAAATCGTGCTCAAAATAC
GCGAACCTTTTGTAGACAAAGATACAGAGATTGTCAACGAGAAATGGTTG
ATATTAGATGCACATCTGCGCAAACTCGATATGGTAAGATGTTAGAAATG
CTGTGTGATACCAAGCACTGCGATTTGCTTTGAAATAACATTATCTTTCC
TTTAAACAAATACTACTTTTCCAGGAGGGAttcgttttattttgattgtG
TTTCATTGAtcttccaactttttttttcagaaaacccCATCAGCAATTCC
TCAAGGAAAAGCCGTTAGCGCGTGAGTATagacattttcttttcttttga
attatttcaaaataatttacttcTCCCCACCTGCTTAGGTATCAGAGATA
TCCACCAATATGCAATTTTTGACCTCCACCATGAAGAATTCAAGAAATTT
GAGATAGTTCACCAGGCATTTGTCTGTCTGTCTTTTGACCGGCATCTTTG
TTCTGATCTCTAGCCATCCATCGAACGGTCATCAACACATCAAACTACAT
TCTTTATGAACGAATCTTTCTTCCGATAATTTTCTCTTTCTACTATTTCT
TTCTTCTCCATAGAAATTCGAAAGTTTGCGCCATTTCTTGAATTCTTATT
GGTGGAGCATAATCCATTGCAGAAGTTTTGTTCGAAATTTTATTTACtat
catttttattgttttttacacaggatataattttttgaaggggattttta
gttttctttgtaaatattttttgtacataAGATGCTTTTATAAGACTGtt
aatataagaaaaaaaggagCACCATGATGAATTGAATCATTACATTGTCA
GTATTCTTGTCTATGCAATTAATATATTGTGTAGATTGTGTAGATCATGA
AATCAATGATTTTACCCAATTAAATAACTGAGAGAAGCTGAACCGTTTCA
TATTTTTTGTCTTTAGATACGAAAGTTTAGAAGTCATGAAATCTGAGAAA
TCGCTCTTTGAACGACAGGTAATAATCATACCTTTCAAAtcccttttttt
ttaattgcgtATCTCCCTAACTTGtaacatttttggacctacctccgggt
accccggtggaggttctataaattaacccatgtccgttcgtccgtccgtc
cgttcgtccgtctgttaccagcttttctcaggattgactcattagttttt
tctgattttttgcggagcccgatttttgagaaaaaatttatttgggcaaa
tttgggccaaaaactacctaaaaatagggttttttggactttgtgcaaaa
tcctgtcattacttttttctgattttttgtacaaagatggagggcaagat
tctctaaagaatggctgaagtggtttttttccgaaaaattcttattcgcc
ttaaaaaacggatttccgtattttggggaaattacctttaaccaaataag
aaaatatagcttttctcaaagttgactcattatttttttctgattttttg
cacaatgatgcaaaatggcaatgcctaaaatgtgacagatGTTTCGGCTT
TTTTTACCTTTATGCCCGCACTCCATAACTCTATATTACTCTCCATAACT
TGCTCGAACATTTCACTGAGTTTCTGACTATGTTCAATGAATTAATAATT
TCTCCTTATAGGTAGCTGCTTACAAACAGCAAGGCAAACAACCTCCAACA
GAGTTATTACATAAAATCAAATCTCACAACGAAAGTATGATAGCCATCCA
AAATCGCCTGAAACAAGGAGGAAAGCCAGCTGTTATAGGTTCGTAAgtct
ttgtcaaattttcttcCCAAATCGGCTGTTAGATAATTTCAAGTGATTTT
GTCTCTGTATGacctttttggatttttatGGATATCTTCGGTTTTTTGTT
TAGAATATTTGAAGAATTTGGGTCGTGGAGTAGAAGTGGAGATGAAGAAC
GCGCAAGTTGCTGCTAAAAAGAACGATGACGTAAGAAATATTACAATACC
AATGCAAAGTCGAACCCAGTTCCTTTGTTCACTTTTTNTGCTAAAAAGAA
CGATGACGTAAGAAATATCACAATACCAATGCAAAGTCGAACCCAGTTCC
TttgttcacttttttatgattctaaaGTTTGTCCCAAAAGTATGTGGACG
CTTtagtttttgaacattttctcaGCACCCATTAATGTTATGTTAGAAAG
TTaaacaccgttggaaagatatttccaaggaaaataaaataaatgaaatt
ctTTAGAATGTTTGAATCTTGCTGATTTTAAAACAGCAAAAATGACCAAC
TTCACAgtgctgtaactttttatctaaggaaaatacaaaaattctGAATA
GAGATGTAAAATCAGCAAGGTTCAAACATTCTAAAGAATTTCATGAAGTT
CATgtcatgatttttaaaacaatacaatttttttcattttttttctttat
ttttcaacttttaaaaaatcttttatcctttagattaTTTTCTTGAGAAA
TATCATTCTAACGGTGTATAACTTTCTAACATAGCATGAATAAGTGCtca
gaaaatgtcaaaaaactaaagtgtccacatactttaGAGAGAGAGAGTTT
GATACGTATCGTAAATTGAAAAAGTGTCTCGAAGCATTCAAGGATTAATT
TAATCACATCTTTTTTGCTAGTGGGTATGTGAACTATGAAAATGTAGAAA
TTGCGGAATTGGAACGAGTTTCTTATTATGATAAATAAAGGAACTGTTTT
TCTCCCGTTAGGATATCATTCTCTGACAAACCCTCCTTTTTCAGAAAAct
gcaaaaaattgtttggttaaGAAGAAATTATTGGACAAAGaggtaaaata
taaattttctttgtcttcgATTTTCCCTCCTACTATTATTCACTCGAATC
CAGCGGCAAATCCAGCAAATGGCTTTTTTTTTATCCAAAGACGGttaaaa
gggaagaaattttgacgggaatttaatttggattAGGAAAAATGCTAATT
ATGGAGTATGACGGATTTTTTTCAGGGTTAAAACAATGTGACTTtcaact
ttgtgaaaaattaaattaaagaatAATAATAGTGGGAActtgatttggcg
gatttcTGACATATCCGCCAAATtctcttcccgccaaaatttgcTTCCCG
TAAAGTATATGATAAATTTAAGGAAATTCAGCTATCTTAGCTTTGGCAAA
CTGAATCTTGGTTTAGGGAAatgaaattaggtattttttttaacaaaaag
gaAACGGTTCTTCTTGTTTCAGATTGGAGTATTGAAACAAAGGCTGGGAC
TTTGATGAGATAAGTGGCTTAAAGTTATTAccaatttatttttatacatt
TCTAGGAAAATacgaaatattaaaaactaAAATGTATTATTTATGTACAA
ACTTGAAATAAGatcggaaattttcaaaacgtatatggAATATTATCGTA
AACTACAGAATATGCATCGAAGATTTacaaaaatgttagattctGGCTGC
CCGGTACACAAAAAACTCTGTGAAATCTATTTTAAGATGCTCGGACCaat
gaaaaatcatgaaaatagtAACACGGTTTAGCAGTTGATACGTTGATGAA
TTTTTCAGCAAATTTCTTCGCCCAACGTTCCAAATTTTATGGGTTATGCT
TTCACAGTATTGTCAACATATTAATAATTCTTTACTCCACACACGACGTT
TCATTTTCCAATTTGGTATTATATTTGTTGCCAGTTTTTTCTAAtcattt
gtttatgtttattgTATTGTAATTATCAATTGTTTATATGATATTGGAAT
AAATTTTCCGTCCGAACGTCTTTTGTAGCGGACGGTAGTTATCACACATC
GTCCCTTCTCGATTCACTTTGGTCGATCGCAACTGCCGAAATTCTTGCAA
CTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000572XLOC_000572Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000982-exon-sc0000007-1491911889:248251..248272TCONS_00000982-exon-sc0000007-1491911889:248251..248272Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:248251..248272TCONS_00000982-exon-sc0000007-1510915933:248251..248272Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:248251..248272TCONS_00000982-exon-sc0000007-1575043694:248251..248272Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:248479..248619TCONS_00000982-exon-sc0000007-1491911889:248479..248619Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:248479..248619TCONS_00000982-exon-sc0000007-1510915933:248479..248619Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:248479..248619TCONS_00000982-exon-sc0000007-1575043694:248479..248619Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:248732..248790TCONS_00000982-exon-sc0000007-1491911889:248732..248790Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:248732..248790TCONS_00000982-exon-sc0000007-1510915933:248732..248790Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:248732..248790TCONS_00000982-exon-sc0000007-1575043694:248732..248790Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:248901..249017TCONS_00000982-exon-sc0000007-1491911889:248901..249017Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:248901..249017TCONS_00000982-exon-sc0000007-1510915933:248901..249017Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:248901..249017TCONS_00000982-exon-sc0000007-1575043694:248901..249017Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:250054..250127TCONS_00000982-exon-sc0000007-1491911889:250054..250127Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:250054..250127TCONS_00000982-exon-sc0000007-1510915933:250054..250127Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:250054..250127TCONS_00000982-exon-sc0000007-1575043694:250054..250127Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:250295..250350TCONS_00000982-exon-sc0000007-1491911889:250295..250350Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:250295..250350TCONS_00000982-exon-sc0000007-1510915933:250295..250350Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:250295..250350TCONS_00000982-exon-sc0000007-1575043694:250295..250350Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:252782..252833TCONS_00000982-exon-sc0000007-1491911889:252782..252833Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:252782..252833TCONS_00000982-exon-sc0000007-1510915933:252782..252833Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:252782..252833TCONS_00000982-exon-sc0000007-1575043694:252782..252833Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:253229..253328TCONS_00000982-exon-sc0000007-1491911889:253229..253328Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:253229..253328TCONS_00000982-exon-sc0000007-1510915933:253229..253328Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:253229..253328TCONS_00000982-exon-sc0000007-1575043694:253229..253328Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:254285..254375TCONS_00000982-exon-sc0000007-1491911889:254285..254375Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:254285..254375TCONS_00000982-exon-sc0000007-1510915933:254285..254375Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:254285..254375TCONS_00000982-exon-sc0000007-1575043694:254285..254375Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:254537..254683TCONS_00000982-exon-sc0000007-1491911889:254537..254683Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:254537..254683TCONS_00000982-exon-sc0000007-1510915933:254537..254683Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:254537..254683TCONS_00000982-exon-sc0000007-1575043694:254537..254683Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:254831..254871TCONS_00000982-exon-sc0000007-1491911889:254831..254871Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:254831..254871TCONS_00000982-exon-sc0000007-1510915933:254831..254871Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:254831..254871TCONS_00000982-exon-sc0000007-1575043694:254831..254871Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:255517..255568TCONS_00000982-exon-sc0000007-1491911889:255517..255568Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:255517..255568TCONS_00000982-exon-sc0000007-1510915933:255517..255568Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:255517..255568TCONS_00000982-exon-sc0000007-1575043694:255517..255568Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:256212..256338TCONS_00000982-exon-sc0000007-1491911889:256212..256338Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:256212..256338TCONS_00000982-exon-sc0000007-1510915933:256212..256338Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:256212..256338TCONS_00000982-exon-sc0000007-1575043694:256212..256338Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:256454..256530TCONS_00000982-exon-sc0000007-1491911889:256454..256530Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:256454..256530TCONS_00000982-exon-sc0000007-1510915933:256454..256530Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:256454..256530TCONS_00000982-exon-sc0000007-1575043694:256454..256530Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:257345..257392TCONS_00000982-exon-sc0000007-1491911889:257345..257392Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:257345..257392TCONS_00000982-exon-sc0000007-1510915933:257345..257392Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:257345..257392TCONS_00000982-exon-sc0000007-1575043694:257345..257392Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1491911889:257823..258453TCONS_00000982-exon-sc0000007-1491911889:257823..258453Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1510915933:257823..258453TCONS_00000982-exon-sc0000007-1510915933:257823..258453Clytia hemisphaericaexon
TCONS_00000982-exon-sc0000007-1575043694:257823..258453TCONS_00000982-exon-sc0000007-1575043694:257823..258453Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:248251..258453 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.90569	3.5515	1.87655	2.21864	0.893944	6.12243e-08	3.87355	4.23874	3.58006	4.17431	5.46595	2.94914	3.66902	5.06219	2.75637	2.56772	3.19227	3.72935	1.74907	3.35563	1.93657	1.50566	1.52123	2.41893	1.89604	3.80734	1.10151	1.88501	1.68246	2.46764
Blast
[Close]
BLAST of TCONS_00000982 vs. Swiss-Prot (Human)
Match: C2D1B (Coiled-coil and C2 domain-containing protein 1B OS=Homo sapiens GN=CC2D1B PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.051e-34
Identity = 83/277 (29.96%), Postives = 143/277 (51.62%), Query Frame = 2 
Query:    8 VDLTTVPSVRPTKGASTQQGSSPTGLREEIKMTGTNNENYVFVETALQRQIEAAEKNTAHYKLMGNLDAAKNFEMLLKNSQKDIMTLQQYKANKSPVPKCFYVKKTFPVTKSNPHLSDSELEITVVRCLNVPLQQGYQPKDMYTYVTCEMAYXXXXXXXXXXXXXXXXXN-PEYNGVFKVLIDRKQSAFKRFCRRGVVNFKLFYVRGFLKSDKAIGQASVKLTGFANKCEIHECVDIVDLEKGRKAIGGKIEIVLKIREPFVDKDTEIVNEKWLILD 835
            VDL+ VPS       + ++G       E+++++    E Y  ++  L  Q E     +  +   GN+     FE L ++ +K +  LQ  +A     P   +  KTF   +    L+ +E+ + +VR +N+P   G  P D+  +V  E  YP       + T + +  N PE++ +FK+ I+R    FKR  +   + F++F+   F +SDK +G A +KL    N+CEI E V+++D   GRK  GGK+E+ +++REP   +D ++V E WL+L+
Sbjct:  586 VDLSKVPSP-----LTDEEGDFILIHHEDLRLSQKAEEVYAQLQKMLLEQQEKCLLFSKQFMHQGNVAETTRFEKLAQDRKKQLEILQLAQAQGLDPPTHHFELKTFQTVRIFSELNSTEMHLIIVRGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFKRVIQSKGIKFEIFHKGSFFRSDKLVGTAHLKLERLENECEIREIVEVLD---GRKPTGGKLEVKVRLREPLSGQDVQMVTENWLVLE 854
The following BLAST results are available for this feature:
BLAST of TCONS_00000982 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
C2D1B5.051e-3429.96Coiled-coil and C2 domain-containing protein 1B OS... [more]
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