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TCONS_00000978 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000978
Unique NameTCONS_00000978
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1987

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000978 ID=TCONS_00000978|Name=TCONS_00000978|organism=Clytia hemisphaerica|type=transcript|length=1987bp
aaCATAATTGTCTGTTCATTGGATATTGATTTCAGACTCAAAGTGATAGA
AAATGTTTGGAAGTGGAAAGAAAGGCAAATCAAGAGCCAGCAAATCTCCA
AATGATGATATGTCCAATGTGATGGGTTTAGGTGGCATGGATTctgatga
tgaagatgaatCAAGTCTTTTGGCAGAACTTGCTGCTCTTGAAGGGAGAC
CTGTAGCTCCCAAAAAAGCTAAACCCAAAAAAGCCTTGGTGAGCATGGAT
GAGATTGACCGTGAAGCAGAAGCAGGTATGGCTGATATTCATGATGGTGA
GATCAACAATGaagatgattttgatgaaaatgatttgcTGGCTGAATTAA
ATGATATAGTAAGCGATGAAGAAGATAAACCTCCGCCACCCAAAGTAGAG
AAGCCTGCAGCAGCTTCATCTGGTGGGATGCAGAAAACGCTAACAGATCG
TCGTGAAATCTATGTACAGGCTATCGCTAATGCAAAAGCAGAAGGTGCTT
CCTCGAAAGTCCGAAGATTCGATCGTGGTCTGAAGGAAATAGAAAGATTG
ATCAAGAGCGTTTCGAAAGGTGCCACGATTTCTGAAGATGATATTCCACC
TCCAGTAGTTGTCAAATCCAGTTCGCCCATTAACCCTAAAACACAAACac
tacccccacctgaaaaaccAGGACGGGCCACCGTTATCACGCCCGTTGAA
CCCTTCACTGCACCAGTTGAAACTCCACCCACCCGCACACCGGAACCCCA
ACCAGTCACTGCACCCACACCTCAACCACGCCCCACAGCTACACCACCAG
TTCAACCAACAACTCAAgacaatgaaaaattgaatcttCTTTTGGAAAGA
CAAAAGCAATTCAAAGTTTTAGCATTACAAATGAAACAAAGAGGAGATAT
TGATGGTGCCAAGAAAAATTTGGCAATCGCAAAACAATTCGACAGTGTGA
TTGCTGCAGTGAAAGAAGGGAAGGAGGTTGACCTCTCAAGAATGCCACAA
GTTCCCTCAGTATCTGAACCGTCGCCTGCGGCACCACCACAACAACCACA
AGCTGCTAGCTCCCCACCCAAACAGCCAGTAGCACCACCATCATCATCGT
CTACACCAGGTGCTCCTTCCACTGTCTTAGAAGCTTTAGAGCAGCGTTTG
GAGAAATATCGTGAAACTGGTGCTAAAGCTAAAGAGGAGGGGAACAGCGG
CAAAGTGAGACGTATGGGTCGAATTGTAAAGCAATTCGAAGCGGCGATAA
AAGATTACAAAGCGAACAAACCAGTAGATTTCAACGAATTACCATGTCCC
CCAGGCTTCGGTCCAATCCCTGGTGAAACACAAGCAGAAGAACCTGGCGA
CCCTCAAGAAATGGCTCAAATGTTGATAAACGCACCTTTAGACGGACCTG
AAGAAGATGACACGCCCAAACCACCATCGTCCAAATCTGTTGCACCCGCC
CCTTCACGCCCTGCTGTTGTCAACCCTGGAGTATCAGGAAGTCGCAACGA
GAACCAGTATCAATTTCTTGTCACTCGTCAAAAGGAATTCAAGAAAGCAG
CTCTTGAAGCTAAACATGCAGGCAACATTGATCAAGCTAGAGATTATCTC
CGAAAAGCAAAGGGATTGGATCCGATGATCGAAGCTGCATCCAGTGGACT
TGGTGTGGATCTCACAACAGTTCCATCGGTGCGACCGACCAAAGGAGCGT
CAACACAACAAGGCTCATCACCTACTGGTTTAAGAGAAGAAATCAAGATG
ACTGGAACGAACAATGAAAACTATGTGTTCGTTGAAACCGCTCTTCAAAG
ACAAATTGAGGCCGCAGAAAAGAACACAGCTCATTACAAATTGATGGGAA
ATTTAGATGCTGCCAAAAACTTTGAAATGTTGTTAAAGAACTCTCAGAAA
GACATAATGACGCTACAACAATACAAAGCAAATAAATCGCCCGTTCCCAA
ATGCTTCTACGTCAAAAAGACCTTCCCCGTTACAAAg
Run BLAST on NCBI

transcript from alignment at sc0000007:243363..249930+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000978 ID=TCONS_00000978|Name=TCONS_00000978|organism=Clytia hemisphaerica|type=transcript|length=6568bp|location=Sequence derived from alignment at sc0000007:243363..249930+ (Clytia hemisphaerica)
aaCATAATTGTCTGTTCATTGGATATTGATTTCAGACTCAAAGTGATAGA AAATGTTTGGAAGTGGAAAGAAAGGCAAATCAAGAGCCAGCAAATCTCCA AATGATGATATGTCCAATGTGGTATGTTACTCCataaaaatgtgattttt ttgccctttttgtcTAATATTTGATTGTCTATATTCGGATCACCCTAAGT TAGAAGAGAAGCAGAGTAAATTGGGTTAAGATAAAACgggtgaaaaaaat taaagtggGAATTAGGGTATATGcattcatttttcatattttgttgcTGT CATTTTTCAGATGGGTTTAGGTGGCATGGATTctgatgatgaagatgaat CAAGTCTTTTGGCAGAACTTGCTGCTCTTGAAGGGAGACCTGTAGCTCCC AAAAAAGCTAAACCCAAAAAAGGTAATAATTATAAAACAATGAAGATAGC TGAAAGCTATTTcatcaagattttttcaatatttcatttttataacaTTA TAATGCTATCTACACCGATTAAAAGTTTCTTAAATCTTAATAATATATAG CCCATTTTATCGTACTCACACAGCCTTGGTGAGCATGGATGAGATTGACC GTGAAGCAGAAGCAGGTATGGCTGATATTCATGATGGTGAGATCAACAAT GaagatgattttgatgaaaatgatttgcTGGTAAGATGCCTCAGTTCTGC TCagttttctttttattagaTTGTAGTTCACTCCCAGAAAATCCCCAATG GTGATTTGCCCCCTTGAAAATATCCACAAGAAAATTCCCTCTGTTGACCA ACTATGggtttttcccaaaaaatttttttcattctcgTTCAGAGTTGGTG CCAATTATTGAGTGCGTAAGGTCTTTAGAAATTAGCTATTAGAGGAAATA TTTGTTTCAACAGCAAATGAATGTACCTAGGATCCTGGACTTTCTGAGTA ATAGACTTTTTTGGGTGttttactttaggcgtacaaactttcgcgagcag aaactttcgcgaggacgaaaaatcgcgaaattcacgacatttactttcgc gaatttaacggaaaaatattTTTCGCGAGCATAAACattcgcgaatcaag acgtaaaattgagaattttcacacgaaaaaatggcttagagacacaaata cttcttgggttggcttgaaacatttgtcctttgacttattagtcttttag cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttctgc tcgcgaaagtttctacgcctaaagtattctcctcaaacaaatattttagt aaattcttgaaaaatacttcaaataaggcgaattttctttcttttgaaaa tctatCGTGGCGAATTCAGGGGAAATCTTCTGCAGAATTTTCTGGAGCAT TTTCTGGATGGAACTCTTGGTCTTTCTCTACATTTGATGAGTTCAACTTT CTTGGTAAAAGTaggtattccttttgcagccatttaatttatttttgcgc atcttttttttgttttcctcaGGCTGAATTAAATGATATAGTAAGCGATG AAGAAGATAAACCTCCGCCACCCAAAGTAGAGAAGGTAAAGATTTATGCC ATTAGTTTTTAAAGTTCTTTCGTCTCAGTCAgataaaaatatgatttttg tCGCAAGATTCAGTAAAATTGTTTATAAACATCGAATAAATTTGGTTGTT GTGTAAAGCAAttttctgtctcaaaattctaCTATAAGCACACAAATATT TTAAGAGATGAAATTTAGTCTGGAAGAAATATCACCCCTGCTAGTTTTCT TTTGTGAAGTGAAGAATGTAGGAGATTGAATAAAGTTTACAACTTTCTGT ATTTAGCCTGCAGCAGCTTCATCTGGTGGGATGCAGAAAACGCTAACAGA TCGTCGTGAAATCTATGTACAGGCTATCGCTAATGCAAAAGCAGAAGGTG CTTCCTCGAAAGTCCGAAGATTCGATCGTGGTCTGAAGGTTTGTTTGATA TTCTTTGAAATGAGTATTGAATCCAGTGACAAGAGCtgatttaacatttt ttattattatgttTCTATGATTTTCCTAGGTAtttgcagattttcatgat CGGATCTGTTctaacattttgattttgtttcaaATCCAATTTCGCATTTT GTAGGAAATAGAAAGATTGATCAAGAGCGTTTCGAAAGGTGCCACGATTT CTGAAGATGATATTCCACCTCCAGTAGTTGTCAAATCCAGTTCGCCCATT AACCCTAAAACACAAACactacccccacctgaaaaaccAGGACGGGCCAC CGTTATCACGCCCGTTGAACCCTTCACTGCACCAGTTGAAACTCCACCCA CCCGCACACCGGAACCCCAACCAGTCACTGCACCCACACCTCAACCACGC CCCACAGCTACACCACCAGTTCAACCAACAACTCAAgacaatgaaaaatt gaatcttCTTTTGGAAAGACAAAAGCAATTCAAAGTTTTAGCATTACAAA TGAAACAAAGAGGAGATATTGATGGTGCCAAGAAAAATTTGGCAATCGCA AAAGTAAGTGGGTATATTTTTAGGAATTCCCTGACTTCAAATCAAATAAC TTTCAAATCTCAATCTCAACCAATGAATTGATATTTTAAGTTCTTATATT TTCTCATCTTTAGCAATTCGACAGTGTGATTGCTGCAGTGAAAGAAGGGA AGGAGGTTGACCTCTCAAGAATGCCACAAGTTCCCTCAGGTGAGAAAATC GTTACTTGGGTGACGGCGTTGTTTATTAGGTAATAGTAAGTAATAGTTGT AATAttctatttgttttattttcatcataGTATCTGAACCGTCGCCTGCG GCACCACCACAACAACCACAAGCTGCTAGCTCCCCACCCAAACAGCCAGT AGCACCACCATCATCATCGTCTACACCAGGTGCTCCTTCCACTGTCTTAG AAGCTTTAGAGCAGCGTTTGGAGAAATATCGTGAAACTGGTGCTAAAGCT AAAGAGGAGGGGAACAGCGGCAAAGTGAGACGTATGGGTCGAATTGTAAA GGTAGTTATTAGCCTGTTTAGATCTTTCATCATCTATGATACAAACTTCA TTTTTGAATTTGCTTGTAATTTCAATTATATCTTCTCACGCTTGTATTTC CAAGTCATATGAACaccaaaaacattattttgtgCATTGTATTAGATAAT ATGTaatcttgtttttctttcttgttttttcagCAATTCGAAGCGGCGAT AAAAGATTACAAAGCGAACAAACCAGTAGATTTCAACGAATTACCATGTC CCCCAGGCTTCGGTCCAATCCCTGGTGAAACACAAGCAGAAGAACCTGGC GACCCTCAAGAAATGGCTCAAATGGTGAGACATGATCATGTTCTGTTTAT TACCTTCAGTAGAATGATTTACAcgaggattatatttcgcgagtTTCACG ATTTTCCCCGAAAATTCGTGAAATTTAATGCTCGCAAGAATTTTTTAACC aagtttttttcccaaaaacctTCTTTGATTCTTTTCCAAAACCTCTATGA AAAATGGTTTAGATGGGACGATGGCTTCGTTTCATTACATTATTAATACT ATGCTACACTGTGGCTATTCAACAAGAATTTCTGAACGACCACACTATCA TTCGTTTGAAGAGATTCaactttgaaataaatattCTCGCTTTTTCCACA GTTGATAAACGCACCTTTAGACGGACCTGAAGAAGATGACACGCCCAAAC CACCATCGTCCAAATCTGTTGCACCCGCCCCTTCACGCCCTGCTGTTGTC AACCCTGGAGTATCAGGAAGTCGCAACGAGAACCAGTATCAATTTCTTGT CACTCGTCAAAAGGAATTCAAGAAAGCAGCTCTTGAAGCTAAACATGCAG GCAACATTGATCAAGCTAGAGATTATCTCCGAAAAGCAAAGGTACGCTAT CATCAAGCTGACATTCAttagacaaaaatatttgtgaacattttttgatt tgtttaaaCTATTTCAATGTTGCTCTTTCTCGTTTCAAGGGATTGGATCC GATGATCGAAGCTGCATCCAGTGGACTTGGTGTGGATCTCACAACAGTAC GTGATCGCTTTGATCCTCACTGAAAGCTTTTTTGATCACTCATTAATTCA TCTACCTTTCCTCAATATTTCTAGAAATCTTTTATGTGATAAAATAATCA AGTTGAAAGTTACGAAAATTATATGATAAGTTAAAATTACCAATGACGAC GAAAGTTCTAAGttgaaagttaaaaacatcGTGATGATGTACATGCTTTT GCCAATTTTAGGTTCCATCGGTGCGACCGACCAAAGGAGCGTCAACACAA CAAGGCTCATCACCTACTGGTTTAAGAGAAGAAATCAAGATGACTGGAAC GAACAATGAAAACTATGTGTTCGTTGAAACCGCTCTTCAAAGACAAATTG AGGTCAGTGCTTCTTTACCATTGTTACCTCACAAAATTAAGTATTTTATT TCTTGACGGTGAAGTTCGTTTGATAAAGACGattgttttaagttttttaa tttttcatacatAGGCCGCAGAAAAGAACACAGCTCATTACAAATTGATG GGAAATTTAGATGCTGCCAAAAAGTAAGTTTTCCAGCTNTTTGGCGTGGA TCTCACAACAGTACGTGATCCTCACTGAAAGCTTTTTTGATCACTCATTA ATTCATCTACCTTTCTTCAATATTTCTAGAAATCTTTTATGTGATAAAAT AATCAAGTTGAAAGTTACGAAAATTATATGATAAGTTAAAATTACCAATG ACGACGAAAGTTCTAAGttgaaagttaaaaacatcGTGATGATGTACATG CTTTTGCCAATTTTAGGTTCCATCGGTGCGACCGACCAAAGGAGCGTCAA CACAACAAGGCTCATCACCTACTGGTTTAAGAGAAGAAATCAAGATGACT GGAACGAACAATGAAAACTATGTGTTCGTTGAAACCGCTCTTCAAAGACA AATTGAGGTCAGTGCTTCTTTACCATTGTTACCTCACAAAATTAAGTATT TTATTTCTTGACGGTGAAGTTCGTTTGATAAAGACGattgttttaagttt tttaatttttcatacatAGGCCGCAGAAAAGAACACAGCTCATTACAAAT TGATGGGAAATTTAGATGCTGCCAAAAAGTAAGTTTTCCAGCTTTTCCGG CTTCAACATTCTTCTGTATAAATATCAACGGTTTGATTGATGTAATTTTA CCTTGCAATTACataattctttttaatttctttcataGCTTTGAAATGTT GTTAAAGAACTCTCAGAAAGACATAATGACGCTACAACAATACAAAGCAA ATAAATCGCCCGTTCCCAAATGCTTCTACGTCAAAAAGACCTTCCCCGTT ACAAAgtaattttttcttctctttggTTTACGGAATCAGTAATATCTGAT AGTGACTTGACAAAACTAGTCAGTTCTCGATGTAAGTGCTTTTTTCACat gataaatttttcatttttcttacatACAGGTCCAATCCACATTTGAGTGA TTCTGAATTAGAGATCACCGTGGTTCGATGTTTGAACGTACCGCTACAAC AAGGTGAGTGACAATGCTTTCTTTTGTTGAATGAACTTCACTTCACTTTC TATTGATTTTTGAACTTTGCCTGGATGTCCACTTTGACTTTCGATTTCTC CGAACAACTCCTTACGTAAAAAGTCTCATCTTTTGTTTAGACAACAACCA ctgctttttttttatttcaggctACCAACCAAAAGATATGTATACTTATG TCACTTNGTCAACACAACAAGGCTCATCACCTACTGGTTTAAGAGAAGAA ATCAAGATGACTGGAACGAACAATGAAAACTATGTGTTCGTTGAAACCGC TCTTCAAAGACAAATTGAGGTCAGTGCTTCTTTACCATTGTTACCTCACA AAATTAAGTATTTTATTTCTTGACGGTGAAGTTCGTTTGATAAAGACGat tgttttaagttttttaatttttcatacatAGGCCGCAGAAAAGAACACAG CTCATTACAAATTGATGGGAAATTTAGATGCTGCCAAAAAGTAAGTTTTC CAGCTTTTCCGGCTTCAACATTCTTCTGTATAAATATCAACGGTTTGATT GATGTAATTTTACCTTGCAATTACataattctttttaatttctttcataG CTTTGAAATGTTGTTAAAGAACTCTCAGAAAGACATAATGACGCTACAAC AATACAAAGCAAATAAATCGCCCGTTCCCAAATGCTTCTACGTCAAAAAG ACCTTCCCCGTTACAAAg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000572XLOC_000572Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000978-exon-sc0000007-1491911889:243363..243483TCONS_00000978-exon-sc0000007-1491911889:243363..243483Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:243363..243483TCONS_00000978-exon-sc0000007-1510915933:243363..243483Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:243363..243483TCONS_00000978-exon-sc0000007-1575043694:243363..243483Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:243673..243784TCONS_00000978-exon-sc0000007-1491911889:243673..243784Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:243673..243784TCONS_00000978-exon-sc0000007-1510915933:243673..243784Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:243673..243784TCONS_00000978-exon-sc0000007-1575043694:243673..243784Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:243936..244042TCONS_00000978-exon-sc0000007-1491911889:243936..244042Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:243936..244042TCONS_00000978-exon-sc0000007-1510915933:243936..244042Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:243936..244042TCONS_00000978-exon-sc0000007-1575043694:243936..244042Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:245135..245197TCONS_00000978-exon-sc0000007-1491911889:245135..245197Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:245135..245197TCONS_00000978-exon-sc0000007-1510915933:245135..245197Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:245135..245197TCONS_00000978-exon-sc0000007-1575043694:245135..245197Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:245469..245600TCONS_00000978-exon-sc0000007-1491911889:245469..245600Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:245469..245600TCONS_00000978-exon-sc0000007-1510915933:245469..245600Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:245469..245600TCONS_00000978-exon-sc0000007-1575043694:245469..245600Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:245767..246165TCONS_00000978-exon-sc0000007-1491911889:245767..246165Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:245767..246165TCONS_00000978-exon-sc0000007-1510915933:245767..246165Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:245767..246165TCONS_00000978-exon-sc0000007-1575043694:245767..246165Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:246276..246351TCONS_00000978-exon-sc0000007-1491911889:246276..246351Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:246276..246351TCONS_00000978-exon-sc0000007-1510915933:246276..246351Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:246276..246351TCONS_00000978-exon-sc0000007-1575043694:246276..246351Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:246443..246663TCONS_00000978-exon-sc0000007-1491911889:246443..246663Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:246443..246663TCONS_00000978-exon-sc0000007-1510915933:246443..246663Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:246443..246663TCONS_00000978-exon-sc0000007-1575043694:246443..246663Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:246846..246986TCONS_00000978-exon-sc0000007-1491911889:246846..246986Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:246846..246986TCONS_00000978-exon-sc0000007-1510915933:246846..246986Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:246846..246986TCONS_00000978-exon-sc0000007-1575043694:246846..246986Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:247314..247553TCONS_00000978-exon-sc0000007-1491911889:247314..247553Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:247314..247553TCONS_00000978-exon-sc0000007-1510915933:247314..247553Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:247314..247553TCONS_00000978-exon-sc0000007-1575043694:247314..247553Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:247652..247708TCONS_00000978-exon-sc0000007-1491911889:247652..247708Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:247652..247708TCONS_00000978-exon-sc0000007-1510915933:247652..247708Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:247652..247708TCONS_00000978-exon-sc0000007-1575043694:247652..247708Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:247924..248064TCONS_00000978-exon-sc0000007-1491911889:247924..248064Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:247924..248064TCONS_00000978-exon-sc0000007-1510915933:247924..248064Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:247924..248064TCONS_00000978-exon-sc0000007-1575043694:247924..248064Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:248177..248235TCONS_00000978-exon-sc0000007-1491911889:248177..248235Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:248177..248235TCONS_00000978-exon-sc0000007-1510915933:248177..248235Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:248177..248235TCONS_00000978-exon-sc0000007-1575043694:248177..248235Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1491911889:249813..249930TCONS_00000978-exon-sc0000007-1491911889:249813..249930Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1510915933:249813..249930TCONS_00000978-exon-sc0000007-1510915933:249813..249930Clytia hemisphaericaexon
TCONS_00000978-exon-sc0000007-1575043694:249813..249930TCONS_00000978-exon-sc0000007-1575043694:249813..249930Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:243363..249930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.2094 21.8821 13.8168 9.39538 8.93102 6.67021 13.0789 15.7917 14.8858 21.806 21.8538 11.6017 15.357 17.7705 13.5092 14.5995 17.9446 17.1458 10.5597 14.7709 13.9225 15.5233 11.5807 16.6022 16.3512 17.7745 15.3114 11.4883 13.805 15.9933
Blast
BLAST of TCONS_00000978 vs. Swiss-Prot (Human)
Match: C2D1A (Coiled-coil and C2 domain-containing protein 1A OS=Homo sapiens GN=CC2D1A PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.773e-37
Identity = 132/411 (32.12%), Postives = 199/411 (48.42%), Query Frame = 2
Query:  830 LNLLLERQKQFKVLALQMKQRGDIDGAKKNLAIAKQFDSVIAAVKEGKEVDLSRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEALEQRLEKYRETGAKAKEEGNSGKVRRMGRIVKQFEAAIKDYKANKPVDFNELPCPPGFGPIPGETQAEEPGDPQ-----EMAQMLIN--------------------APLDGPEEDDTXXXXXXXXXXXXXXXXXXXNPGVSGSRNENQYQFLVTRQKEFKKAALEAKHAGNIDQARDYLRKAKGLDPMIEAASSGLGVDLTTVPSVRPTKGASTQQGSSPTGLREEIKMTGTNNENYVFVETALQRQIEAAEKNTAHYKLMGNLDAAKNFEMLLKNSQKDIMTLQQYKANKSPVPKCFYVKKTFPVTK 1987
            L  L  RQ+ +K+ AL  KQ+GD   A ++  +AK FD+V+ A+  G+ VDLS          P P   P  P +  S P  P   PS++  P  P T+LEALEQR+E+Y+   A+AK +G+  K R   RIVKQ++ AI+ +KA + VD  ELP PPGF PI G  +A +P         E A  L N                    AP   P+   +  P S  +            P  + +R + Q  FL  R+K+  +AAL AK   +++ A+ +LR+AKGL+PM+EA+ +GL VD+T VP     K           GL +E          Y  +   +++Q E    ++  +  +GN+     FE L ++ ++ +  L+Q      P P   + ++TF V K
Sbjct:  257 LAQLQSRQRDYKLAALHAKQQGDTTAAARHFRVAKSFDAVLEALSRGEPVDLS-------CLPPPPDQLPPDPPSPPSQPPTPATAPSTTEVPPPPRTLLEALEQRMERYQVAAAQAKSKGDQRKARMHERIVKQYQDAIRAHKAGRAVDVAELPVPPGFPPIQG-LEATKPTQQSLVGVLETAMKLANQDEGPEDEEDEVPKKQNSPVAPTAQPKAPPSRTPQSGSAPTAKAP------PKATSTRAQQQLAFLEGRKKQLLQAALRAKQKNDVEGAKMHLRQAKGLEPMLEASRNGLPVDITKVPPAPVNKDDFALVQRPGPGLSQEAA------RRYGELTKLIRQQHEMCLNHSNQFTQLGNITETTKFEKLAEDCKRSMDILKQAFVRGLPTPTARFEQRTFSVIK 647          
The following BLAST results are available for this feature:
BLAST of TCONS_00000978 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
C2D1A4.773e-3732.12Coiled-coil and C2 domain-containing protein 1A OS... [more]
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