Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000930 ID=TCONS_00000930|Name=TCONS_00000930|organism=Clytia hemisphaerica|type=transcript|length=802bpRun BLAST on NCBI protein sequence of TCONS_00000930-protein >TCONS_00000930-protein ID=TCONS_00000930-protein|Name=TCONS_00000930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp MTDSSAAFSESFLRFRERTFNQDTDDQLKKEGQKILDKHVPKKSGPINSHRun BLAST on NCBI transcript from alignment at sc0000005:912612..913413 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00000930 ID=TCONS_00000930|Name=TCONS_00000930|organism=Clytia hemisphaerica|type=transcript|length=802bp|location=Sequence derived from alignment at sc0000005:912612..913413 (Clytia hemisphaerica) Coding sequence (CDS) from alignment at sc0000005:912612..913413 >TCONS_00000930 ID=TCONS_00000930|Name=TCONS_00000930|organism=Clytia hemisphaerica|type=CDS|length=501bp|location=Sequence derived from alignment at sc0000005:912612..913413 (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00000930 vs. Swiss-Prot (Human)
Match: TM128 (Transmembrane protein 128 OS=Homo sapiens GN=TMEM128 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.108e-18 Identity = 49/132 (37.12%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 166 DTDDQLKKEGQKILDKH--VPKKSGPI---NSHSVFWMVVSIFTFYYTDFYLALRYDPRIERTYLNIGLGFLSLSTLIAVTLIGYYHYYMGIKDYEKHQPFAIPISVVSFLVGMTLLSIALWPVWSFLTPII 546 D + QL +EG + V KK P+ N HS FW++ SI YY DF+ L+ + +L G L +S IA I Y +Y GI +Y+ P IPI+ SF+ +IALW VWSF TP++ Sbjct: 19 DAEAQLDREGDAGPETSTAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFKTLKENFHTSSWFL-CGSALLLVSLSIAFYCIVYLEWYCGIGEYDVKYPALIPITTASFIAAGICFNIALWHVWSFFTPLL 149 The following BLAST results are available for this feature:
BLAST of TCONS_00000930 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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