TCONS_00000924 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000924
Unique NameTCONS_00000924
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000924 ID=TCONS_00000924|Name=TCONS_00000924|organism=Clytia hemisphaerica|type=transcript|length=374bp
GTAAAATTTTGCTGCAAAAGGAATACTTGACAAAATAGAACGAAAATGGG
TTAATGTAAACAAACATGCTTAGAAAAGCAGACTTTAAAACCAGTTAAAA
CAACAATAAAATGAAAAATTAAAATCCTAAATAAAATCAAAACAACTTTA
AAAAATACTGAATATAATCACATGATATCATGTGGACTGACCTTAATTGG
TTGCTGAGATAAATTTGAAGTGATTTCACACTTCCCCCACCAAATTTGCC
AACTATCAATGTTTTCCCCGCTCTTTTTTCCTCCCTTTACTATTCAAATT
TTAATTTTCGCCCCTCACCCATCCAAAATTGGAAAATTGGTTTAaaaggg
gggggggaggacactatgttgcgg
Run BLAST on NCBI

transcript from alignment at sc0000005:774847..775220

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000924 ID=TCONS_00000924|Name=TCONS_00000924|organism=Clytia hemisphaerica|type=transcript|length=374bp|location=Sequence derived from alignment at sc0000005:774847..775220 (Clytia hemisphaerica)
ccgcaacatagtgtcctcccccccccctttTAAACCAATTTTCCAATTTT
GGATGGGTGAGGGGCGAAAATTAAAATTTGAATAGTAAAGGGAGGAAAAA
AGAGCGGGGAAAACATTGATAGTTGGCAAATTTGGTGGGGGAAGTGTGAA
ATCACTTCAAATTTATCTCAGCAACCAATTAAGGTCAGTCCACATGATAT
CATGTGATTATATTCAGTATTTTTTAAAGTTGTTTTGATTTTATTTAGGA
TTTTAATTTTTCATTTTATTGTTGTTTTAACTGGTTTTAAAGTCTGCTTT
TCTAAGCATGTTTGTTTACATTAACCCATTTTCGTTCTATTTTGTCAAGT
ATTCCTTTTGCAGCAAAATTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000549XLOC_000549Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000924-exon-sc0000005-1491911889:774847..775220TCONS_00000924-exon-sc0000005-1491911889:774847..775220Clytia hemisphaericaexon
TCONS_00000924-exon-sc0000005-1510915933:774847..775220TCONS_00000924-exon-sc0000005-1510915933:774847..775220Clytia hemisphaericaexon
TCONS_00000924-exon-sc0000005-1575043694:774847..775220TCONS_00000924-exon-sc0000005-1575043694:774847..775220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:774847..775220 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.215017	0.41935	0.278012	0.866506	2.60966	0.687395	1.65863	1.55279	0.724761	0.448867	0.871363	0.218084	0.715004	0.742539	0.160015	0.5241	0.645649	0.661769	0.457135	0	0.623671	2.03679	0.493068	0.224135	1.05275	1.44222	0.732354	1.2586	0.954607	0.330184
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000924 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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