TCONS_00000840 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000840
Unique NameTCONS_00000840
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1388

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000840 ID=TCONS_00000840|Name=TCONS_00000840|organism=Clytia hemisphaerica|type=transcript|length=1388bp
TCACAAACCATTCGATAAATTCTCCGGATCAAGTGCGGCAAAACATCACA
GCCGCCCGCAACAATGTCACCTCCCACAACCACCATCGCAACAACCCGCT
GCGCACCCATTCAACCACCAATTCACTGTAAAAGACCAGTAATAGAACAA
CCCATCTCTCCGACCTTCATTTCAACAAATTTAATAACACCAGGAAGATT
TAAACGAGAAACTCTACCAACCATAGGCTACCATGCGAAAAGTGGGAGAG
AACAGAAACTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTT
GCATACAGTAATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTG
CAAAGTGGTTGTCTCACATAGACATCTTGGAAATCGCATTGACAACCTCG
ATACAAGTCAACAACCATACAGCGTAACTGGTTTAATGCTCAGTAAATGT
AGATACAGTGATCAGATTGTACCGAAACCTTTTCAATCAGCTGAAGTCCA
tgagaaATACATATGCGAGCCTTATCCCAAAGAGTTTTGCAACAAGTACC
AATCACATCGATGCAAGTTTCAATTGTTCCCTACAAACGGAGTTGATCTT
ATTGATGCAGAAACAACGTCAATCAAGTACCCGACACAATTTAAGTTACA
AGAGAAGACAAAACAAGCATTGACCAATCTACACCAATGTCACCAAGGTA
CTACAACATATAACCAAGCACATGAACACGAACAAATCAAATTAAAACCa
aataaacataaacaaagacaTAATGTCCGAATTAAAATCTGTGTTCGGAC
ATGTAAATTATGTGGACTGAAAATCAACGATTCCCAACCATACAATAAAG
ACAAAGAGAAGAAAAGTATATCAAAGAAAAAAGGGATTGTTCCAAAAGCG
TACTGGCCACCGGGGGAGCTAAACATAAGCAATAACCAATTAAATTACCC
AATGTTGAAGCTACCAAAATATTGCCTGAGGCCGCAATTCATTGATCata
aagatttcaaagaaaGTGAGGCAAAGGATGAAGGTTTTTGCCGATGTAAA
GGTAAAGTTCCTATTATGGTAAGTACGATCATGGTCAAACCGTCcagtga
aaattttgaaaagaaaatgaaaagtgaacGAATCTTGAAACGAAGAAAAA
CCCCACATCCAGGTAAATTCATAAACAGTGAGGATACAATCAACCCTCCC
GTTGGAAAGATGTCTGAAAGCCAATATGAACGTGGCTTCAAGACAGACGC
ACATCatcgatttttaaaagattataaGGAGATTATACCCAATTTAAGCG
ATGCAGTACAGACCGGACGTAAACATGATTTCTTTGGATGGAATGTCAAT
TTTTTCCGCGGATGAAATAAAACAAGTCCAGAAAAAAC
Run BLAST on NCBI

protein sequence of TCONS_00000840-protein

>TCONS_00000840-protein ID=TCONS_00000840-protein|Name=TCONS_00000840-protein|organism=Clytia hemisphaerica|type=polypeptide|length=433bp
MSPPTTTIATTRCAPIQPPIHCKRPVIEQPISPTFISTNLITPGRFKRET
LPTIGYHAKSGREQKLWGQDTKQTIKEELAYSNFKPSHLVNGPDDCKVVV
SHRHLGNRIDNLDTSQQPYSVTGLMLSKCRYSDQIVPKPFQSAEVHEKYI
CEPYPKEFCNKYQSHRCKFQLFPTNGVDLIDAETTSIKYPTQFKLQEKTK
QALTNLHQCHQGTTTYNQAHEHEQIKLKPNKHKQRHNVRIKICVRTCKLC
GLKINDSQPYNKDKEKKSISKKKGIVPKAYWPPGELNISNNQLNYPMLKL
PKYCLRPQFIDHKDFKESEAKDEGFCRCKGKVPIMVSTIMVKPSSENFEK
KMKSERILKRRKTPHPGKFINSEDTINPPVGKMSESQYERGFKTDAHHRF
LKDYKEIIPNLSDAVQTGRKHDFFGWNVNFFRG
Run BLAST on NCBI

transcript from alignment at sc0000005:960099..967365-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000840 ID=TCONS_00000840|Name=TCONS_00000840|organism=Clytia hemisphaerica|type=transcript|length=7267bp|location=Sequence derived from alignment at sc0000005:960099..967365- (Clytia hemisphaerica)
TCACAAACCATTCGATAAATTCTCCGGATCAAGTGCGGCAAAACATCACA
GCCGCCCGCAACAATGTCACCTCCCACAACCACCATCGCAACAACCCGCT
GCGCACCCATTCAACCACCAATTCACTGTAAAAGACCAGTAATAGAACAA
CCCATCTCTCCGACCTTCATTTCAACAAATTTAATAACACCAGGAAGATT
TAAACGAGAAACTCTACCAACCATAGGGTATGTAAAAGATATTTTACATC
GTTTATAAGGAGCTGAAAAGCACGAACTTAGGGATAAATGAATGAATGTT
CAGTTCGCAATAACGATTTTGATGAGTTACGAGATTTCAACCATGTATAT
GCTCTCTTGTCACCGTTGTAAAAGTTTGGAATGAAGTTTCTTCATTCTTA
TGGAGAGTTTCTGAGAAATGCTTAGAAGAAGTAGCTCCAAAAGGCCTTCT
TTGTTTAACTTTTTTTTGCTTTTACCTTGTTCAAAAATACGGTTTAAGCA
ATTTGTAAAAAAACATCTTATGTCCTTTAATCTACCCAAGATCTGCAAAG
TTTTGTATGCTTCTTCCTTTACAAGGGTACTTTTTTTGCCTTAAAAACTA
CATTATCTTGCTTGCTTCTAATAACTCTAGCTACCATGCGAAAAGTGGGA
GAGAACAGAAACTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAA
CTTGCATACAGTAATTTCAAACCATCACATTTGGTCAATGGACCAGACGA
TTGCAAAGTGGTTGTCTCACATAGACATCTTGGAAATCGCATTGACAACC
TGTAAGAATTCTATACTTCATATTTTACACAAATCTTTCTAAATTTCTCT
TTAAAGGAAAATTACAACAAGAAAATCGATGGATCCATAATACACCATTA
TCAAATGGTATTAAATTTTCTCATATCGACTTGACAATTTGGCTGACACT
CCAAAAACTTTTAGCTCAATATCGTTGACAGTTGATGTGATGTGTCTTGG
TTGGTCAAACTTTCTCTTCTCTTTCTTTTTAGCGATACAAGTCAACAACC
ATACAGCGTAACTGGTTTAATGCTCAGTAAATGTAGATACAGTGATCAGA
TTGTACCGAAACCTTTTCAATCAGCTGAAGTCCAGTAAGTGGAATACAAT
TTATTCTTTATTTCTTCACATTAGCCTATAGCAAAGCCTCATCTAATGTC
TTTTCCCGCGCGACCAATATTCTTGTAAAGTGGATTTGATAGTAGAGGGC
ATTTTGTAAAATCGCTCGACTGTTTTGTTAGAAGCACTTGTTATACATTT
TTGGAAAGCTAAGGGGTAGGGGAATCGAAATTACTATGTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAATTTTAGCTCGAG
AAAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTAGGAT
TAGAGATATATTGCAAGTATAGGTGATTTCATTACCTAACTCGAGATATT
GAGCTTCAAAAAGCGCAAAAATTGGACAAAATAGCTGTTTCCCAATGGGC
ACAAACGTCTTTTGGACGTCTAATGTACGTTTCTAGGACGTCCAAAGGTC
TTAAAGGCGTCCATTGAATGTCCATAAGACGTTGCGTGCCCATAGGGTTC
TGGCTGAAAAACACGGTTTTCAAGGGTTAATATCTCGAGTTAGGCACAGA
AATCACCTATACTTGCAATATATCTCTAATCTTAATTTTTTGAGAGCTTT
CCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCATTAATTTTTAACCCTA
TGATTTTTGCCTGAGACCGTCATATTTGTCCGAAAATCACACCAAAGTGT
CCGAAAAAAAATTGGAAACATAGTAATTTCGATTCGCCTACCCCTTAGCT
TTCCAAAAATGTATAACAAGTGCTTCTAACAAAACAGTCAAGCGATTCTA
AAAAATCAAACAAAATTCCCCCTACTATGACACCCAACACGCTGAAATGA
TTTCTAACATTCTACTTTAATGGAAGAAATTTTGGCGCGAAGATATTTTG
ACGAATTTGGCGAATTAACTTAAAAATTCGCTAAATTCGCCAAAATTTCT
TCCCGCCAAACTTAAAGGTCTTTCGCCAAAATTAATTCTCGCTAAATTTG
ATTTTCTTTCAATTTAGTCTCTATTTCTCCTAAAAACCACTTTTTTGAAC
TAAAATGTTCAATAAAAATTGGATCGTTCGCCAAAATTAATTCTCGCCAA
ATTTAAAGATTTTATTAATTCGCCATGGGCTCATTCGCCAAAATTTCTTC
TCGCCAAAATTTCTTCTCTTATAGTAGTCTGAAATGTCAATTATACAGTA
GCGACCCAAGCGCAAGCTCTCTCAAACGGGCTTATTAACTGTTTGCGATT
GACGAATGACTGAAAATATCCTTAACATCGCCTGTTTAAAATCAAATTAA
AAGTGAAAAATGTCAAATGTTTTTGAAAGCTTACTACATGTAAGAGATTT
TGTTATGAGTATCATGAATTAAAGGGAACACCTGCAGTTCAAATCTATTT
TTTTTTTCAGTGAGAAATACATATGCGAGCCTTATCCCAAAGAGTTTTGC
AACAAGTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACAAACGG
AGTTGATCTTATTGATGCAGGTATGACTTTGAACCACTGATTTATATTCT
AAGCATGATTCGCTTGCCTAACCCTTTTGCGGAGAAGCCTTTTTCCTTTG
TAAAAAAAAAATTAGCCTTTACAAGTGATCAGAAATTTAAAAATTATTCC
ATCCAGTAGATCGGAATTACTTAAAGTAGCCTCTCTTTCAGTACGAAAAA
ATTAAAAGTTTGGCCGTTCTTGAAGATCGATATAAACAGTTGTATCAATC
ACTTGATCATGTATGAGCCATAAGTTAAGACTTTCATAGAAAAACTATAA
TCTTTTTTCCTCTTTCCGAACAGAAACAACGTCAATCAAGTACCCGACAC
AATTTGTAAGTATAATACACATATTATATTCTGTTGCATCCATCCTAATC
TAATTATTAAAATGTCTGTAGAGAGGAGAACTTTTAACACAACTCGAGCT
GTGTGTTTTAAATAGAAATTGTAGTAAAATCTTTCCAATACTAATAACTT
AACTTATGTTGTATTACAACAAGTACAGTATGTGGCCCCCAAAACGTCCA
TCAAATTTAAAATTTCTCTCAAATCTAAAGGAGAAAACGTTTTACAAAAA
TTTTTGCTGAATGAAAAAACTTTAACATCTCTACTTTATTTCCCAGAAGT
TATTTTTCGAAATTTTGAATTTCAACAATATTTTTCAATCGCTTAAAGAT
AGGTAGCTTTTTTTTAATGGCCCCCAAAACGGAGGTTTGAAATTTCAGCG
CGATTTCTTGAGATATCTTTAAGATATGAATACAAAATTTTGACCATAGT
TTGGAAATGTGATTTAGAGGGTTTTGGGCATAAATTTGTTTGATAAAATT
TTTACAGTATACCCCTGGTTGTCAAAACGCAGGTTTGGGGCCCCCAAAAC
GTAGGTGTAGTTTAAATCAAATTATTAAGCCCAGTGGTAATAGGGGGAGA
AACTATGAATATGTGATTTCCCTTAACCTTTAGAAGCCGAGAGACGTACC
ACGTACGTCATATATAGAGGCCGAGAGACGTACCACGTACGTTTTGATAC
TGGGGTCCTTTCAAAGTTTAATAAAATAAAGACCAGTTTGAATTTTTCTA
TTCTGTAAAATTTAGCAGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCACTTAATTTACCTGTTGTGGCCAGAGTGTCGATTTTGG
TGGAAAAGTGTGCTTCACCGAAACTTAGATTCTGAGATGAAATGAGCTTC
TTCAGCCCTGAAATTTAACACAAGTTTATTTGTAACATAAACTAAAACAA
AATAATTTTTCTGGGACCAATCTTTACCTTGTACCCACTTTTTTCATCCA
ATTTGTCAAAAAAAAGAAAAAAAGTGAAAAAATCGTAAACATGGAATTTT
TACTGTTTTGATTTGAGGCTGTGTAGTCAGGTTTAAAAGGGTGATGAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTCAAAATGGGTTTACTTTTTACTTAAGCTTTA
GCGGTTCAGATTTTATGACATTTTCCGCGAAACCTCCATTTTCATGAAAA
AAACAGCGGCAGCAGCGCACGCTGTTTTTAAAAACAGCGGTGTCTAAAGG
TTAAATTTACGACCCGATAGATGTAAAATTTATGATTTTTATTAAATATT
TCAAGATTTTCGATGATGCAAAGTCCAAACTGAAAACTTAGAAAGTTTCA
AAATGACAATTTTGATTTAACAACGTCTTAATCAAGTTTCTGAAAAACGA
TCTCTTTTGAAAATAGTTCCATTCATGTATGGAATATGCTGTGAAAATGT
TAGAAAATCAGCTTAACTGAAACTGAAAATATTAAGCCTTAAAGGTATTT
TTCTCCTACATTTTGCAAAAAAATAGACAGAATTTGCCGTTTTTGCTCAT
TCAGCGAAAATTTTTATTTGTAATATTAATTTTTTTGTTATAAACTATTA
TTTCAAGCTGATAAGAATGGAATTCCAAGATTTTTTGCTCTTTCTCATAT
TTAGAATTTTCGGTTTTATCATTACTGGTTATAGGACCCCGAAATACTGG
TTGACCTTTAAGATACTATATCTTTAACCCATCCTAAAGTCACAGATGTA
TTTACATTTTCTGAAAGGCATTAGGTGTAGAAAGTTTCCTATACCCCATT
TTCATAACTTATTTTCACTATCCAAGGAGCTAGAGTGATTATATGCAATT
TTTATCTAATTTTGGTGTTCAAATATGTCCTTCAGACGCAAATATGTTAT
TTTGAAGCTGTCTCAAACCATCAAAAACATGCTCGTTTTTAAGAATGACC
ATCATTCTTTCAAAATAAAAAAAAATCGTCTAATTCTGATAAATCTACAG
GTCAAAATCCTCATTTTAATGACGACCTACGTTTTGGGGGCCGTCTCCGT
TTTGGGGGCCGTCTCCGTTTTGGGGGCAATATACTGTATGGAATAAATGA
TATATCAAATTTGTTTGAAACAAATGAACAGTTTGTCAAAAACGTTTATT
TCCGAAGACACGAAACAAACAAGTTTGTTTCGGACCTTCATAGATATAAC
CAAATATATTAATTTACAAACACATCTCCATGTTTAAAAATTCAAGTTAT
GGAGATTTGAACTTGAGACTGTTTAAGGACTTCTACCTGAGGACACCCCT
GTGACTTCAAGACCGCTGGGGCGCCAGCCCCACTGAGAAATTGACTTTCA
TTTCATCCCAATCGAAATTCATTGTTTAGAAATCACATTCTAAAACCTTG
GAACAATAGAATTTTTATCCCCATTGAGATTTCAATTGAAATTTTAATTG
TAGGAAAAAGTTACACCGGGGCTGTGAGACAGGGGTGTCTAAGGGGACCA
GAGAAATTCCAGTTATAACATTCTATGGTTTAAATACATACTGTAAAAAT
CACTTTGTTTCCACTTTATAGAAGTTACAAGAGAAGACAAAACAAGCATT
GACCAATCTACACCAATGTCACCAAGGTACTACAACATATAACCAAGCAC
ATGAACACGAACAAATCAAATTAAAACCAAATAAACATAAACAAAGACAT
AATGTCCGAATTAAAATCTGTGTTCGGACATGTAAATTATGTGGACTGAA
AATCAACGATTCCCAACCATACAATAAAGACAAAGAGAAGAAAAGTATAT
CAAAGAAAAAAGGGATTGTTCCAAAAGCGTACTGGCCACCGGGGGAGCTA
AACATAAGCAATAACCAATTAAATTACCCAATGTTGAAGCTACCAAAATA
TTGCCTGAGGCCGCAATTCATTGATCATAAAGATTTCAAAGAAAGTGAGG
CAAAGGATGAAGGTTTTTGCCGATGTAAAGGTAAAGTTCCTATTATGGTA
AGTACGATCATGGTCAAACCGTCCAGTGAAAATTTTGAAAAGAAAATGAA
AAGTGAACGAATCTTGAAACGAAGAAAAACCCCACATCCAGGTAAATTCA
TAAACAGTGAGGATACAATCAACCCTCCCGTTGGAAAGATGTCTGAAAGC
CAATATGAACGTGGCTTCAAGACAGACGCACATCATCGATTTTTAAAAGA
TTATAAGGAGATTATACCCAATTTAAGCGATGCAGTACAGACCGGACGTA
AACATGATTTCTTTGGATGGAATGTCAATTTTTTCCGCGGATGAAATAAA
ACAAGTCCAGAAAAAAC

Coding sequence (CDS) from alignment at sc0000005:960099..967365-

>TCONS_00000840 ID=TCONS_00000840|Name=TCONS_00000840|organism=Clytia hemisphaerica|type=CDS|length=7812bp|location=Sequence derived from alignment at sc0000005:960099..967365- (Clytia hemisphaerica)
AAGTTACAAGAGAAGACAAAACAAGCATTGACCAATCTACACCAATGTCA
CCAAGGTACTACAACATATAACCAAGCACATGAACACGAACAAATCAAAT
TAAAACCAAATAAACATAAACAAAGACATAATGTCCGAATTAAAATCTGT
GTTCGGACATGTAAATTATGTGGACTGAAAATCAACGATTCCCAACCATA
CAATAAAGACAAAGAGAAGAAAAGTATATCAAAGAAAAAAGGGATTGTTC
CAAAAGCGTACTGGCCACCGGGGGAGCTAAACATAAGCAATAACCAATTA
AATTACCCAATGTTGAAGCTACCAAAATATTGCCTGAGGCCGCAATTCAT
TGATCATAAAGATTTCAAAGAAAGTGAGGCAAAGGATGAAGGTTTTTGCC
GATGTAAAGGTAAAGTTCCTATTATGGTAAGTACGATCATGGTCAAACCG
TCCAGTGAAAATTTTGAAAAGAAAATGAAAAGTGAACGAATCTTGAAACG
AAGAAAAACCCCACATCCAGGTAAATTCATAAACAGTGAGGATACAATCA
ACCCTCCCGTTGGAAAGATGTCTGAAAGCCAATATGAACGTGGCTTCAAG
ACAGACGCACATCATCGATTTTTAAAAGATTATAAGGAGATTATACCCAA
TTTAAGCGATGCAGTACAGACCGGACGTAAACATGATTTCTTTGGATGGA
ATGTCAATTTTTTCCGCGGATGAAAACAACGTCAATCAAGTACCCGACAC
AATTTTGAGAAATACATATGCGAGCCTTATCCCAAAGAGTTTTGCAACAA
GTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACAAACGGAGTTG
ATCTTATTGATGCAGCGATACAAGTCAACAACCATACAGCGTAACTGGTT
TAATGCTCAGTAAATGTAGATACAGTGATCAGATTGTACCGAAACCTTTT
CAATCAGCTGAAGTCCACTACCATGCGAAAAGTGGGAGAGAACAGAAACT
ATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTTGCATACAGTA
ATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTGCAAAGTGGTT
GTCTCACATAGACATCTTGGAAATCGCATTGACAACCTATGTCACCTCCC
ACAACCACCATCGCAACAACCCGCTGCGCACCCATTCAACCACCAATTCA
CTGTAAAAGACCAGTAATAGAACAACCCATCTCTCCGACCTTCATTTCAA
CAAATTTAATAACACCAGGAAGATTTAAACGAGAAACTCTACCAACCATA
GGAAGTTACAAGAGAAGACAAAACAAGCATTGACCAATCTACACCAATGT
CACCAAGGTACTACAACATATAACCAAGCACATGAACACGAACAAATCAA
ATTAAAACCAAATAAACATAAACAAAGACATAATGTCCGAATTAAAATCT
GTGTTCGGACATGTAAATTATGTGGACTGAAAATCAACGATTCCCAACCA
TACAATAAAGACAAAGAGAAGAAAAGTATATCAAAGAAAAAAGGGATTGT
TCCAAAAGCGTACTGGCCACCGGGGGAGCTAAACATAAGCAATAACCAAT
TAAATTACCCAATGTTGAAGCTACCAAAATATTGCCTGAGGCCGCAATTC
ATTGATCATAAAGATTTCAAAGAAAGTGAGGCAAAGGATGAAGGTTTTTG
CCGATGTAAAGGTAAAGTTCCTATTATGGTAAGTACGATCATGGTCAAAC
CGTCCAGTGAAAATTTTGAAAAGAAAATGAAAAGTGAACGAATCTTGAAA
CGAAGAAAAACCCCACATCCAGGTAAATTCATAAACAGTGAGGATACAAT
CAACCCTCCCGTTGGAAAGATGTCTGAAAGCCAATATGAACGTGGCTTCA
AGACAGACGCACATCATCGATTTTTAAAAGATTATAAGGAGATTATACCC
AATTTAAGCGATGCAGTACAGACCGGACGTAAACATGATTTCTTTGGATG
GAATGTCAATTTTTTCCGCGGATGAAAACAACGTCAATCAAGTACCCGAC
ACAATTTTGAGAAATACATATGCGAGCCTTATCCCAAAGAGTTTTGCAAC
AAGTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACAAACGGAGT
TGATCTTATTGATGCAGCGATACAAGTCAACAACCATACAGCGTAACTGG
TTTAATGCTCAGTAAATGTAGATACAGTGATCAGATTGTACCGAAACCTT
TTCAATCAGCTGAAGTCCACTACCATGCGAAAAGTGGGAGAGAACAGAAA
CTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTTGCATACAG
TAATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTGCAAAGTGG
TTGTCTCACATAGACATCTTGGAAATCGCATTGACAACCTATGTCACCTC
CCACAACCACCATCGCAACAACCCGCTGCGCACCCATTCAACCACCAATT
CACTGTAAAAGACCAGTAATAGAACAACCCATCTCTCCGACCTTCATTTC
AACAAATTTAATAACACCAGGAAGATTTAAACGAGAAACTCTACCAACCA
TAGGAAGTTACAAGAGAAGACAAAACAAGCATTGACCAATCTACACCAAT
GTCACCAAGGTACTACAACATATAACCAAGCACATGAACACGAACAAATC
AAATTAAAACCAAATAAACATAAACAAAGACATAATGTCCGAATTAAAAT
CTGTGTTCGGACATGTAAATTATGTGGACTGAAAATCAACGATTCCCAAC
CATACAATAAAGACAAAGAGAAGAAAAGTATATCAAAGAAAAAAGGGATT
GTTCCAAAAGCGTACTGGCCACCGGGGGAGCTAAACATAAGCAATAACCA
ATTAAATTACCCAATGTTGAAGCTACCAAAATATTGCCTGAGGCCGCAAT
TCATTGATCATAAAGATTTCAAAGAAAGTGAGGCAAAGGATGAAGGTTTT
TGCCGATGTAAAGGTAAAGTTCCTATTATGGTAAGTACGATCATGGTCAA
ACCGTCCAGTGAAAATTTTGAAAAGAAAATGAAAAGTGAACGAATCTTGA
AACGAAGAAAAACCCCACATCCAGGTAAATTCATAAACAGTGAGGATACA
ATCAACCCTCCCGTTGGAAAGATGTCTGAAAGCCAATATGAACGTGGCTT
CAAGACAGACGCACATCATCGATTTTTAAAAGATTATAAGGAGATTATAC
CCAATTTAAGCGATGCAGTACAGACCGGACGTAAACATGATTTCTTTGGA
TGGAATGTCAATTTTTTCCGCGGATGAAAACAACGTCAATCAAGTACCCG
ACACAATTTTGAGAAATACATATGCGAGCCTTATCCCAAAGAGTTTTGCA
ACAAGTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACAAACGGA
GTTGATCTTATTGATGCAGCGATACAAGTCAACAACCATACAGCGTAACT
GGTTTAATGCTCAGTAAATGTAGATACAGTGATCAGATTGTACCGAAACC
TTTTCAATCAGCTGAAGTCCACTACCATGCGAAAAGTGGGAGAGAACAGA
AACTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTTGCATAC
AGTAATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTGCAAAGT
GGTTGTCTCACATAGACATCTTGGAAATCGCATTGACAACCTATGTCACC
TCCCACAACCACCATCGCAACAACCCGCTGCGCACCCATTCAACCACCAA
TTCACTGTAAAAGACCAGTAATAGAACAACCCATCTCTCCGACCTTCATT
TCAACAAATTTAATAACACCAGGAAGATTTAAACGAGAAACTCTACCAAC
CATAGGAAGTTACAAGAGAAGACAAAACAAGCATTGACCAATCTACACCA
ATGTCACCAAGGTACTACAACATATAACCAAGCACATGAACACGAACAAA
TCAAATTAAAACCAAATAAACATAAACAAAGACATAATGTCCGAATTAAA
ATCTGTGTTCGGACATGTAAATTATGTGGACTGAAAATCAACGATTCCCA
ACCATACAATAAAGACAAAGAGAAGAAAAGTATATCAAAGAAAAAAGGGA
TTGTTCCAAAAGCGTACTGGCCACCGGGGGAGCTAAACATAAGCAATAAC
CAATTAAATTACCCAATGTTGAAGCTACCAAAATATTGCCTGAGGCCGCA
ATTCATTGATCATAAAGATTTCAAAGAAAGTGAGGCAAAGGATGAAGGTT
TTTGCCGATGTAAAGGTAAAGTTCCTATTATGGTAAGTACGATCATGGTC
AAACCGTCCAGTGAAAATTTTGAAAAGAAAATGAAAAGTGAACGAATCTT
GAAACGAAGAAAAACCCCACATCCAGGTAAATTCATAAACAGTGAGGATA
CAATCAACCCTCCCGTTGGAAAGATGTCTGAAAGCCAATATGAACGTGGC
TTCAAGACAGACGCACATCATCGATTTTTAAAAGATTATAAGGAGATTAT
ACCCAATTTAAGCGATGCAGTACAGACCGGACGTAAACATGATTTCTTTG
GATGGAATGTCAATTTTTTCCGCGGATGAAAACAACGTCAATCAAGTACC
CGACACAATTTTGAGAAATACATATGCGAGCCTTATCCCAAAGAGTTTTG
CAACAAGTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACAAACG
GAGTTGATCTTATTGATGCAGCGATACAAGTCAACAACCATACAGCGTAA
CTGGTTTAATGCTCAGTAAATGTAGATACAGTGATCAGATTGTACCGAAA
CCTTTTCAATCAGCTGAAGTCCACTACCATGCGAAAAGTGGGAGAGAACA
GAAACTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTTGCAT
ACAGTAATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTGCAAA
GTGGTTGTCTCACATAGACATCTTGGAAATCGCATTGACAACCTATGTCA
CCTCCCACAACCACCATCGCAACAACCCGCTGCGCACCCATTCAACCACC
AATTCACTGTAAAAGACCAGTAATAGAACAACCCATCTCTCCGACCTTCA
TTTCAACAAATTTAATAACACCAGGAAGATTTAAACGAGAAACTCTACCA
ACCATAGGAAGTTACAAGAGAAGACAAAACAAGCATTGACCAATCTACAC
CAATGTCACCAAGGTACTACAACATATAACCAAGCACATGAACACGAACA
AATCAAATTAAAACCAAATAAACATAAACAAAGACATAATGTCCGAATTA
AAATCTGTGTTCGGACATGTAAATTATGTGGACTGAAAATCAACGATTCC
CAACCATACAATAAAGACAAAGAGAAGAAAAGTATATCAAAGAAAAAAGG
GATTGTTCCAAAAGCGTACTGGCCACCGGGGGAGCTAAACATAAGCAATA
ACCAATTAAATTACCCAATGTTGAAGCTACCAAAATATTGCCTGAGGCCG
CAATTCATTGATCATAAAGATTTCAAAGAAAGTGAGGCAAAGGATGAAGG
TTTTTGCCGATGTAAAGGTAAAGTTCCTATTATGGTAAGTACGATCATGG
TCAAACCGTCCAGTGAAAATTTTGAAAAGAAAATGAAAAGTGAACGAATC
TTGAAACGAAGAAAAACCCCACATCCAGGTAAATTCATAAACAGTGAGGA
TACAATCAACCCTCCCGTTGGAAAGATGTCTGAAAGCCAATATGAACGTG
GCTTCAAGACAGACGCACATCATCGATTTTTAAAAGATTATAAGGAGATT
ATACCCAATTTAAGCGATGCAGTACAGACCGGACGTAAACATGATTTCTT
TGGATGGAATGTCAATTTTTTCCGCGGATGAAAACAACGTCAATCAAGTA
CCCGACACAATTTTGAGAAATACATATGCGAGCCTTATCCCAAAGAGTTT
TGCAACAAGTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACAAA
CGGAGTTGATCTTATTGATGCAGCGATACAAGTCAACAACCATACAGCGT
AACTGGTTTAATGCTCAGTAAATGTAGATACAGTGATCAGATTGTACCGA
AACCTTTTCAATCAGCTGAAGTCCACTACCATGCGAAAAGTGGGAGAGAA
CAGAAACTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTTGC
ATACAGTAATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTGCA
AAGTGGTTGTCTCACATAGACATCTTGGAAATCGCATTGACAACCTATGT
CACCTCCCACAACCACCATCGCAACAACCCGCTGCGCACCCATTCAACCA
CCAATTCACTGTAAAAGACCAGTAATAGAACAACCCATCTCTCCGACCTT
CATTTCAACAAATTTAATAACACCAGGAAGATTTAAACGAGAAACTCTAC
CAACCATAGGAAGTTACAAGAGAAGACAAAACAAGCATTGACCAATCTAC
ACCAATGTCACCAAGGTACTACAACATATAACCAAGCACATGAACACGAA
CAAATCAAATTAAAACCAAATAAACATAAACAAAGACATAATGTCCGAAT
TAAAATCTGTGTTCGGACATGTAAATTATGTGGACTGAAAATCAACGATT
CCCAACCATACAATAAAGACAAAGAGAAGAAAAGTATATCAAAGAAAAAA
GGGATTGTTCCAAAAGCGTACTGGCCACCGGGGGAGCTAAACATAAGCAA
TAACCAATTAAATTACCCAATGTTGAAGCTACCAAAATATTGCCTGAGGC
CGCAATTCATTGATCATAAAGATTTCAAAGAAAGTGAGGCAAAGGATGAA
GGTTTTTGCCGATGTAAAGGTAAAGTTCCTATTATGGTAAGTACGATCAT
GGTCAAACCGTCCAGTGAAAATTTTGAAAAGAAAATGAAAAGTGAACGAA
TCTTGAAACGAAGAAAAACCCCACATCCAGGTAAATTCATAAACAGTGAG
GATACAATCAACCCTCCCGTTGGAAAGATGTCTGAAAGCCAATATGAACG
TGGCTTCAAGACAGACGCACATCATCGATTTTTAAAAGATTATAAGGAGA
TTATACCCAATTTAAGCGATGCAGTACAGACCGGACGTAAACATGATTTC
TTTGGATGGAATGTCAATTTTTTCCGCGGATGAAAACAACGTCAATCAAG
TACCCGACACAATTTTGAGAAATACATATGCGAGCCTTATCCCAAAGAGT
TTTGCAACAAGTACCAATCACATCGATGCAAGTTTCAATTGTTCCCTACA
AACGGAGTTGATCTTATTGATGCAGCGATACAAGTCAACAACCATACAGC
GTAACTGGTTTAATGCTCAGTAAATGTAGATACAGTGATCAGATTGTACC
GAAACCTTTTCAATCAGCTGAAGTCCACTACCATGCGAAAAGTGGGAGAG
AACAGAAACTATGGGGACAAGACACCAAGCAGACGATCAAGGAGGAACTT
GCATACAGTAATTTCAAACCATCACATTTGGTCAATGGACCAGACGATTG
CAAAGTGGTTGTCTCACATAGACATCTTGGAAATCGCATTGACAACCTAT
GTCACCTCCCACAACCACCATCGCAACAACCCGCTGCGCACCCATTCAAC
CACCAATTCACTGTAAAAGACCAGTAATAGAACAACCCATCTCTCCGACC
TTCATTTCAACAAATTTAATAACACCAGGAAGATTTAAACGAGAAACTCT
ACCAACCATAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000505XLOC_000505Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000840-proteinTCONS_00000840-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000840-exon-sc0000005-1575043694:967139..967365TCONS_00000840-exon-sc0000005-1575043694:967139..967365Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1575043694:966565..966735TCONS_00000840-exon-sc0000005-1575043694:966565..966735Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1575043694:966232..966333TCONS_00000840-exon-sc0000005-1575043694:966232..966333Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1575043694:964146..964255TCONS_00000840-exon-sc0000005-1575043694:964146..964255Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1575043694:963811..963842TCONS_00000840-exon-sc0000005-1575043694:963811..963842Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1575043694:960099..960844TCONS_00000840-exon-sc0000005-1575043694:960099..960844Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1510915933:967139..967365TCONS_00000840-exon-sc0000005-1510915933:967139..967365Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1510915933:966565..966735TCONS_00000840-exon-sc0000005-1510915933:966565..966735Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1510915933:966232..966333TCONS_00000840-exon-sc0000005-1510915933:966232..966333Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1510915933:964146..964255TCONS_00000840-exon-sc0000005-1510915933:964146..964255Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1510915933:963811..963842TCONS_00000840-exon-sc0000005-1510915933:963811..963842Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1510915933:960099..960844TCONS_00000840-exon-sc0000005-1510915933:960099..960844Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1491911889:967139..967365TCONS_00000840-exon-sc0000005-1491911889:967139..967365Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1491911889:966565..966735TCONS_00000840-exon-sc0000005-1491911889:966565..966735Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1491911889:966232..966333TCONS_00000840-exon-sc0000005-1491911889:966232..966333Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1491911889:964146..964255TCONS_00000840-exon-sc0000005-1491911889:964146..964255Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1491911889:963811..963842TCONS_00000840-exon-sc0000005-1491911889:963811..963842Clytia hemisphaericaexon
TCONS_00000840-exon-sc0000005-1491911889:960099..960844TCONS_00000840-exon-sc0000005-1491911889:960099..960844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:960099..967365 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0601828	0	0.034071	0.0333332	0.12174	0.160334	0.0386872	0.108656	0.0507149	0.0628185	0.0914598	0	0.0200128	0.145485	0	0	0.384021	0.208381	0	0.0334729	0.378223	0.298012	0.0345022	0.062735	7.65695	8.85202	0.0825225	0.0880703	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000840 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top