|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000832 ID=TCONS_00000832|Name=TCONS_00000832|organism=Clytia hemisphaerica|type=transcript|length=2064bp
caaattttgacgtcataacaacaatttctttaattattaatttttggggt
TATATTTAATTAGGTCACAAGATTCATAAACTTCAAGGTATAACCTTTGA
GCCCTGAGTGGATCCCTACTTTACATAATGGCTGCTATTGATCGCAAAAA
CTTAGGGTAAATTGTTAggtttttgagtcaaaatttgACTTTGCAGAGAA
AACCTTAAAAACCTAATGCTTTTTATTAAACTTAGGGTTAAAACTTTCTT
GTTTTGTCTATATCAAGTTCGAAGAAACTGAAGTGAAAGTATTTGATTTG
AATCACATTCAAATGGCAGAAACAAAGCAGGGGCTAATCATACTTGCACA
AAAGATAATAAGCAATGACAAAAGCAATCAGACAGGTGAGATGGTCTATC
GTGTGCAGTGGTATGACAGTATCATTCCTGAAAGCAATTTGAGAAAGATG
TTTCCTGATTTACTCAAAGAATATGAGTCAAAACAAAAGGTCAAGCCCAA
TCAAAAGGAGGGAGGTGGAACGAAAAGTCATCATAAGGAATCTCAAAAGC
ATACTACCTTAATTCCAAGTTCTCCTAAAAAAATTCTCCATAAAACATAT
TCTCAAGAACTTTCTGCAAAAGAAGtattggcaaaaaaattgattcagaa
acaaaaaaatgcatCTGGAACTGATGCGTTTCATTGTGATTTTTgtgaaa
agaaattcaagaCATCAATTGATTTGAAATGTCATATTTATATTCATCAG
TTTGCAAATGATCGAATTAAGGTTACAAAACCTGGAGTAAGAGAGGGCCC
TTCTATAGCCCCAGTTAAGTCGAACAAATCAAAAAGAAAGCCAACAAGAA
AATATACAccattagaaaaaacaaaatgtgaTATATGTGGTAAAGAAGTA
ACTTCAAAGAGATTAGAGTCACATAAAATTACttatcatttgaaaaatgg
aaaatttcctTGTTCTGAGTGTGAAAAGCGTTTTCAATGTAACAGGGATC
TTCAAAGGCATGCAGAAATACACAAAGATGGAAAGCTTGAGAAAACAAGC
TGTGATATTTGTGGTAAAATTTTAACAAAGAGGCATTTGGAGAATCATAA
GAATCGTTTTCATTCACAAGGGGAATATACTTGCAAGAAGTGTAATAAAA
TATTCAAGCATCTTCTTGACCTAGACTGGCATCTCAAGAAACCGTGCACT
GAAACACCGAATGCTGAGGAAACAAGCACTAGAAAATAGTgtaacaaaat
atccaatagtATAAATGATTGaacatttaattttaattttaattttgttt
gtaaaattTTGTACATATTTAAGTATATAAGTAACCTTTGTATCAAAGCC
AACTTGAGGGCAGGAAAAGGCCCACTTAttctttccctggatttctccac
ttaccatATCTTAAATTGCTGAAAATTAAGCAGAGAGGCAACCATTTTAT
GAATCTCTTGTATGACCCCCCTTGGGCTTGAACCTACAGCCTTGCACACT
TTAATTGAATGCTCTTTTGGGCTGTTGTAGTATATCCTTCAATTCAGCTT
TTCGTTCTCTCAGCCCTAACGGATAGTGATGACAATGTAACATAAGATTT
TTAAACATAGTATTTAttgggggggtttgtacttttacggtgtgacggga
ttggcccttttttagtacggtatcacgggatttgacgaaaaaaagacggg
aaaacaacggtattttaaaatcagacggtgacggtatttaggtacatttt
tgccctgtacaagccgatgtgacggtgttattattttttcaattttcggg
attccgggattcagcaaaaaatttgatgggaaaacggtatttcaaaCCCC
TACATAccgcccccccccctttattgaTATAGATTAAAATAGATCACATT
ATTTAGCATATTTTAGGTacatattatttttaatttttgtgcatAGAATT
AAAACATGATTTTCAGGCATGAAAAAAACTAAGTAAATAAGGCACAGAct
attttaaactatttttgtaggttttttgttttatttcaaaattcactaTG
AATTAACTTTTAGG Run BLAST on NCBI transcript from alignment at sc0000005:769635..772309- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000832 ID=TCONS_00000832|Name=TCONS_00000832|organism=Clytia hemisphaerica|type=transcript|length=2675bp|location=Sequence derived from alignment at sc0000005:769635..772309- (Clytia hemisphaerica)
CAAATTTTGACGTCATAACAACAATTTCTTTAATTATTAATTTTTGGGGT
TATATTTAATTAGGTCACAAGATTCATAAACTTCAAGGTATAACCTTTGA
GCCCTGAGTGGATCCCTACTTTACATAATGGCTGCTATTGATCGCAAAAA
CTTAGGGTAAATTGTTAGGTTTTTGAGTCAAAATTTGACTTTGCAGAGAA
AACCTTAAAAACCTAATGCTTTTTATTAAACTTAGGGTTAAAACTTTCTT
GTTTTGTCTATATCAAGTTCGAAGAAACTGAAGTGAAAGTATTTGATTTG
AATCACATTCAAATGGCAGAAACAAAGCAGGGGCTAATCATACTTGCACA
AAAGATAATAAGCAATGACAAAAGCAATCAGGTAAGGGCTTCTTAAAAGA
ATAATTGTTAAAATATAATTTTACTTAGTTGGTATTATGAAGTAAGGCTT
CACGAGGCGAAGCTCCAGAATACAACAATCAGAAAACATGTCTCCTCTTT
TGTAGGCAAATGACCTTGTGAAACATAACTTTAATTACGCGCTTTTTTTA
TAAGAATGTTAGTGTGAGATTTTGGGGTTAGAACAACATGTCTCCTCTTT
TGTAGGCAAATGACCTCGTAAAACATAACTTTAATTACACGCTTTTTTTA
TAAAAATATCAGTGTGAGATTTTGGGGTTAGAACAATAGGAAAATAAGAA
TAATGCTTCTCACCCTCAGCCAAAGTACACTTTGAAAAAAAGTGTGTATT
TACTATAATATTTACTGGGTTTTCAGTTGTTATCAATGATTTGTAAAAAT
CCGGAAGTGTTCCCAGTTTAAGCAACTCAATCTTGGACTTAAGCTTTTCC
TCATTTTGCTTTATCCACACTAAATGTGAAAATGAAATATATTCTATAAG
GACAAAAGTTTGTGCTTCTATCTTCCTACATTCCCTTACTAAAGTGTTTA
GAATTTCTATTTGAGACCAGTATATTAATTGATTGTTTTTAGACAGGTGA
GATGGTCTATCGTGTGCAGTGGTATGACAGTATCATTCCTGAAAGCAATT
TGAGAAAGATGTTTCCTGATTTACTCAAAGAATATGAGTCAAAACAAAAG
GTCAAGCCCAATCAAAAGGAGGGAGGTGGAACGAAAAGTCATCATAAGGA
ATCTCAAAAGCATACTACCTTAATTCCAAGTTCTCCTAAAAAAATTCTCC
ATAAAACATATTCTCAAGAACTTTCTGCAAAAGAAGTATTGGCAAAAAAA
TTGATTCAGAAACAAAAAAATGCATCTGGAACTGATGCGTTTCATTGTGA
TTTTTGTGAAAAGAAATTCAAGACATCAATTGATTTGAAATGTCATATTT
ATATTCATCAGTTTGCAAATGATCGAATTAAGGTTACAAAACCTGGAGTA
AGAGAGGGCCCTTCTATAGCCCCAGTTAAGTCGAACAAATCAAAAAGAAA
GCCAACAAGAAAATATACACCATTAGAAAAAACAAAATGTGATATATGTG
GTAAAGAAGTAACTTCAAAGAGATTAGAGTCACATAAAATTACTTATCAT
TTGAAAAATGGAAAATTTCCTTGTTCTGAGTGTGAAAAGCGTTTTCAATG
TAACAGGGATCTTCAAAGGCATGCAGAAATACACAAAGATGGAAAGCTTG
AGAAAACAAGCTGTGATATTTGTGGTAAAATTTTAACAAAGAGGCATTTG
GAGAATCATAAGAATCGTTTTCATTCACAAGGGGAATATACTTGCAAGAA
GTGTAATAAAATATTCAAGCATCTTCTTGACCTAGACTGGCATCTCAAGA
AACCGTGCACTGAAACACCGAATGCTGAGGAAACAAGCACTAGAAAATAG
TGTAACAAAATATCCAATAGTATAAATGATTGAACATTTAATTTTAATTT
TAATTTTGTTTGTAAAATTTTGTACATATTTAAGTATATAAGTAACCTTT
GTATCAAAGCCAACTTGAGGGCAGGAAAAGGCCCACTTATTCTTTCCCTG
GATTTCTCCACTTACCATATCTTAAATTGCTGAAAATTAAGCAGAGAGGC
AACCATTTTATGAATCTCTTGTATGACCCCCCTTGGGCTTGAACCTACAG
CCTTGCACACTTTAATTGAATGCTCTTTTGGGCTGTTGTAGTATATCCTT
CAATTCAGCTTTTCGTTCTCTCAGCCCTAACGGATAGTGATGACAATGTA
ACATAAGATTTTTAAACATAGTATTTATTGGGGGGGTTTGTACTTTTACG
GTGTGACGGGATTGGCCCTTTTTTAGTACGGTATCACGGGATTTGACGAA
AAAAAGACGGGAAAACAACGGTATTTTAAAATCAGACGGTGACGGTATTT
AGGTACATTTTTGCCCTGTACAAGCCGATGTGACGGTGTTATTATTTTTT
CAATTTTCGGGATTCCGGGATTCAGCAAAAAATTTGATGGGAAAACGGTA
TTTCAAACCCCTACATACCGCCCCCCCCCCTTTATTGATATAGATTAAAA
TAGATCACATTATTTAGCATATTTTAGGTACATATTATTTTTAATTTTTG
TGCATAGAATTAAAACATGATTTTCAGGCATGAAAAAAACTAAGTAAATA
AGGCACAGACTATTTTAAACTATTTTTGTAGGTTTTTTGTTTTATTTCAA
AATTCACTATGAATTAACTTTTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000832-exon-sc0000005-1575043694:771929..772309 | TCONS_00000832-exon-sc0000005-1575043694:771929..772309 | Clytia hemisphaerica | exon |
| TCONS_00000832-exon-sc0000005-1575043694:769635..771317 | TCONS_00000832-exon-sc0000005-1575043694:769635..771317 | Clytia hemisphaerica | exon |
| TCONS_00000832-exon-sc0000005-1510915933:771929..772309 | TCONS_00000832-exon-sc0000005-1510915933:771929..772309 | Clytia hemisphaerica | exon |
| TCONS_00000832-exon-sc0000005-1510915933:769635..771317 | TCONS_00000832-exon-sc0000005-1510915933:769635..771317 | Clytia hemisphaerica | exon |
| TCONS_00000832-exon-sc0000005-1491911889:771929..772309 | TCONS_00000832-exon-sc0000005-1491911889:771929..772309 | Clytia hemisphaerica | exon |
| TCONS_00000832-exon-sc0000005-1491911889:769635..771317 | TCONS_00000832-exon-sc0000005-1491911889:769635..771317 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:769635..772309 - |
Blast
The following BLAST results are available for this feature:
|
