|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000753 ID=TCONS_00000753|Name=TCONS_00000753|organism=Clytia hemisphaerica|type=transcript|length=2213bp
TCACATACAAAAAGTGCCAGTTGTcagtgttttgtttttacaattttgta
aacatgtCTGTGATGTTTTAGATAAGTTCCATAAATCCAAAGTAGTAGCT
AaagattttgtttgtaatttattACAATGGAATTTAATCGTATAATTTGG
GAAAATGCttttttgaaataatctttTGTCTTTCAGAATGAAAAAGAATC
ATCAGATCTTAGTAACCATAACCAGTGAATGACATTATATCAGATGAGCT
CATTATTACTAATTATTCTAATTTTATATTATCAGTGGGAAAACATTATC
ATAATGGATTTGATGTGATNGTTGGAGAAGGATATTCTTTCCCACTGGAC
GGACAATCATAATCAAGACTCTTGACGGACAATCAAGAGTACAAGACACc
gaccggacatgaccagtccggtgcgtccggtgtttcttaattttttgttt
cataaatgtccggcgtccaattccctgtatgcaacactgagctgacaccg
gacttatagaccttttttcaaagaggccaccctgttgaataattatgtag
tccagcagaaaaacaatgataaaaccatcatgcataattattacaatatg
catgatgatacagtaattatgcatggctctatcattgttttcatggctgg
actacataattattcaacaggatgtcctctttgaaaaaaggtctattgcg
tccggtgtagcgaaaggatactttttgccaccggacgaataaccggacag
tccggtgcgtcgggcGGCAGGGTCCTTCCACCAGCTGCAACGTTGCTTGA
AGGTACTGGTACATGTATGAACAGAACATAAAACAACAAACTGACCGAAA
ACCACATCAATAATCAGCCAAAAATTGTCTGACTGTTAAAATGAAGGAAG
ATTGTGCAGCAGCTCTTAAAAACTCCCATTTTTGCTAGTCCAGGGTCTGG
AGCTCAACTgttttttgcctttgataatcTGATGATGGAAAAAATAGAGA
TAGATTTATATAGATTTTCTGACTACATTTTTGCAGCTTTTCAGGGGTGC
TTATTGAATGATAATGATTCCCCCCTGTTGTCAAATGCATCcactgaaat
ttctttttttcttctcagttcttctcattaaaatttattatttaaaattt
gattttaaacaCCTAAAAAAGGCTGCTAACATGATTGTCCGATATTCTCG
TTCTTGTTCTTCTCGTTCTTGTCAAATATATTTTCAGCATATGTAACTTC
TTTTGTATTGGCAACTAAATGCAGTTTACACCACGAAGTCGGGTaatttg
catcagtggaggctaacatgcatagccctcaaatgactgaccaatcaaga
tcaaagcagcaaaatttcaaaacaaatgaactacgcagctctgctcgcag
ctctactctaccatttttatttttatttaactttgtataAGGAAAAAATT
ACTACACTTGATCATTCAATGACAAATTGATAACCAATCAATTGATTCCT
ATAATCAATAGGACGACCATCAAAAAACTATTCTGTTTGCAACTGTTTGC
aacaggtgttaaaaatgcatgcaggCGGGCAGACAGTCTTTCGGAAAGAT
TCCCCAGGGATTCCCTCTGCGCCAGGAACTGGAACGCTTgaactttctga
aaaatagcttttttgaaataatctttTGTCTTTCAGAATGAAAAAGAATC
ATCAGATCTTAGTAACCATAACCAGTGTATGACATTATATCAGATGAGCT
CACTATTACTAATTATTCTAATTTTATATTATCAGTGGGAAAACATTATC
ATAATGGATTTGATGTGATATTTACAGATAAAtagaaagttttgaataaa
GAACTTTAAAGTTTATCTTGACATCAAGATTTCCCAAAGTTTAAGTAAAC
ATCTCTAAAATTAAATCATTTCCATCTGCATAATAACTCATTATTTTGCT
TGTACTGTGTGTACTGAAGGTACTTCaatattttacttttctttctttaa
gaaaatctAAATGGAGAGGAGTACAAATCATGAGCGTGATAGAGATCTTG
AATTGGAAGAAGTACAAGGAATTGAGATTGCAGAAGGAAAGAAGGaaaac
taaacataaaaaactgaaagaaagaGTGATTCGTGTGAAAAGAAATGCTG
ATGGTTCAAGAGCATACCCGTTTGCTGGACAAAGAAAGAAGTGTAGAAAA
AATTTACAAGAAG Run BLAST on NCBI transcript from alignment at sc0000005:10833..13193- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000753 ID=TCONS_00000753|Name=TCONS_00000753|organism=Clytia hemisphaerica|type=transcript|length=2361bp|location=Sequence derived from alignment at sc0000005:10833..13193- (Clytia hemisphaerica)
TCACATACAAAAAGTGCCAGTTGTCAGTGTTTTGTTTTTACAATTTTGTA
AACATGTCTGTGATGTTTTAGATAAGTTCCATAAATCCAAAGTAGTAGCT
AAAGATTTTGTTTGTAATTTATTACAATGGAATTTAATCGTATAATTTGG
GAAAATGCTTTTTTGAAATAATCTTTTGTCTTTCAGAATGAAAAAGAATC
ATCAGATCTTAGTAACCATAACCAGTGAATGACATTATATCAGATGAGCT
CATTATTACTAATTATTCTAATTTTATATTATCAGTGGGAAAACATTATC
ATAATGGATTTGATGTGATNGTTGGAGAAGGATATTCTTTCCCACTGGAC
GGACAATCATAATCAAGACTCTTGACGGACAATCAAGAGTACAAGACACC
GACCGGACATGACCAGTCCGGTGCGTCCGGTGTTTCTTAATTTTTTGTTT
CATAAATGTCCGGCGTCCAATTCCCTGTATGCAACACTGAGCTGACACCG
GACTTATAGACCTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAG
TCCAGCAGAAAAACAATGATAAAACCATCATGCATAATTATTACAATATG
CATGATGATACAGTAATTATGCATGGCTCTATCATTGTTTTCATGGCTGG
ACTACATAATTATTCAACAGGATGTCCTCTTTGAAAAAAGGTCTATTGCG
TCCGGTGTAGCGAAAGGATACTTTTTGCCACCGGACGAATAACCGGACAG
TCCGGTGCGTCGGGCGGCAGGGTCCTTCCACCAGCTGCAACGTTGCTTGA
AGGTACTGGTACATGTATGAACAGAACATAAAACAACAAACTGACCGAAA
ACCACATCAATAATCAGCCAAAAATTGTCTGACTGTTAAAATGAAGGAAG
ATTGTGCAGCAGCTCTTAAAAACTCCCATTTTTGCTAGTCCAGGGTCTGG
AGCTCAACTGTTTTTTGCCTTTGATAATCTGATGATGGAAAAAATAGAGA
TAGATTTATATAGATTTTCTGACTACATTTTTGCAGCTTTTCAGGGGTGC
TTATTGAATGATAATGATTCCCCCCTGTTGTCAAATGCATCCACTGAAAT
TTCTTTTTTTCTTCTCAGTTCTTCTCATTAAAATTTATTATTTAAAATTT
GATTTTAAACACCTAAAAAAGGCTGCTAACATGATTGTCCGATATTCTCG
TTCTTGTTCTTCTCGTTCTTGTCAAATATATTTTCAGCATATGTAACTTC
TTTTGTATTGGCAACTAAATGCAGTTTACACCACGAAGTCGGGTAATTTG
CATCAGTGGAGGCTAACATGCATAGCCCTCAAATGACTGACCAATCAAGA
TCAAAGCAGCAAAATTTCAAAACAAATGAACTACGCAGCTCTGCTCGCAG
CTCTACTCTACCATTTTTATTTTTATTTAACTTTGTATAAGGAAAAAATT
ACTACACTTGATCATTCAATGACAAATTGATAACCAATCAATTGATTCCT
ATAATCAATAGGACGACCATCAAAAAACTATTCTGTTTGCAACTGTTTGC
AACAGGTGTTAAAAATGCATGCAGGCGGGCAGACAGTCTTTCGGAAAGAT
TCCCCAGGGATTCCCTCTGCGCCAGGAACTGGAACGCTTGAACTTTCTGA
AAAATAGCTTTTTTGAAATAATCTTTTGTCTTTCAGAATGAAAAAGAATC
ATCAGATCTTAGTAACCATAACCAGTGTATGACATTATATCAGATGAGCT
CACTATTACTAATTATTCTAATTTTATATTATCAGTGGGAAAACATTATC
ATAATGGATTTGATGTGATATTTACAGATAAATAGAAAGTTTTGAATAAA
GAACTTTAAAGTTTATCTTGACATCAAGATTTCCCAAAGTTTAAGTAAAC
ATCTCTAAAATTAAATCATTTCCATCTGCATAATAACTCATTATTTTGCT
TGTACTGTGTGTACTGAAGGTACTTCAATATTTTACTTTTCTTTCTTTAA
GAAAATCTAAATGGAGAGGAGTACAAATCATGAGCGTGATAGAGATCTTG
GTAAGTTAATGTGTATTCTTTTCAATAGTTTTTTTTAATGCTTAACTTCA
ACTTATTGTTCTCCTATCTAAACTTTTAGAAAGCTTGTATGTACATGGCG
TGGTTGCCTTATCGTTGAACAGCATTTCTTTATTTTTAAAATCCTTAGAA
TTGGAAGAAGTACAAGGAATTGAGATTGCAGAAGGAAAGAAGGAAAACTA
AACATAAAAAACTGAAAGAAAGAGTGATTCGTGTGAAAAGAAATGCTGAT
GGTTCAAGAGCATACCCGTTTGCTGGACAAAGAAAGAAGTGTAGAAAAAA
TTTACAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000753-exon-sc0000005-1575043694:11144..13193 | TCONS_00000753-exon-sc0000005-1575043694:11144..13193 | Clytia hemisphaerica | exon |
| TCONS_00000753-exon-sc0000005-1575043694:10833..10995 | TCONS_00000753-exon-sc0000005-1575043694:10833..10995 | Clytia hemisphaerica | exon |
| TCONS_00000753-exon-sc0000005-1510915933:11144..13193 | TCONS_00000753-exon-sc0000005-1510915933:11144..13193 | Clytia hemisphaerica | exon |
| TCONS_00000753-exon-sc0000005-1510915933:10833..10995 | TCONS_00000753-exon-sc0000005-1510915933:10833..10995 | Clytia hemisphaerica | exon |
| TCONS_00000753-exon-sc0000005-1491911889:11144..13193 | TCONS_00000753-exon-sc0000005-1491911889:11144..13193 | Clytia hemisphaerica | exon |
| TCONS_00000753-exon-sc0000005-1491911889:10833..10995 | TCONS_00000753-exon-sc0000005-1491911889:10833..10995 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:10833..13193 - |
Blast
The following BLAST results are available for this feature:
|
