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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000712 ID=TCONS_00000712|Name=TCONS_00000712|organism=Clytia hemisphaerica|type=transcript|length=1472bp
AAACAATAgaactttttaaccaatcatAGCGTGTTTACATTTTAATAACA
ACCAATCAGAGTTGAGTAAATTTGTGAATGGGTTTTTTTAATATGTGTTT
GTTACGTTTATCATTTAGATATTTGATCTGATCGAGTTCAGTgatcagaa
aaaaaacagaacGAAATATAAGAAATAATAAGTAGAGAAACAAGTATAGt
atttttttggtggaaaaaatGGAAGCTGTTGATTTGAAGAAAATCAGGAA
AAGTTTATTCGGTTTACCGACGACTAAAGTGAGTCGAAGTTTATTTGGTG
AAGTGGACCATGATGAAGTGAAACGAGATTTGGAACGTGAATACAAAGAA
CTACTGGATGAAAAAACCAAATTATGGAACTTTGATTTCGAAAGATACCA
ACCAAGAGTGGATACAGAATCAAAGTTAAAATGGATTCCTTATTCATCTC
CTGTTACAGAACATTCGATTAAAAGTCAAACTAGTTTGATAACATCCTCA
ACAAGCTGTCAAACAATTGATTATACTTCACGATTTCAAAGACCAGCTGA
TGCAAACCTACCcaagaaaattgcaaaatcaCCATGTGTAAATAATACCA
AGTCACGgttaaataaaacaataaaggACACTTTGAAGCAATCACCGAAA
CAACAGAGTACTTTGTTCATTACGAACACCGACGAAGAAAGCATCAAGAT
CGTTAACGAATCTCCCATACGAAATATTACATCACCAAAAATTTCCGAAG
TACCCATCGAAGAAAGCAAAGTCAAACTCGATATCACTAAGAATCTATCA
CGAAAACGGAAACGAGGGTCACAGCCTACAATAGACGActttatgaagaa
aaagaaacctCGAACAAATATGATGGAATTCAAGAAAGATTTATCAAGCC
CCTCTAGGAGACGCTCGGGACAGATTCAACAACAAATTTAATGAAGAAAA
GAATTGGCGTACCTTCGTTCGATTGTCAACCCAAGCCATCATCCACGTTA
TTTGGAATGGaccatattttttgtttgttttcttttgcGAAACTTAGATC
AGCTATCAAAACATTGTCTTCTGTGAAGAACAACCAACAACattatttca
atatttgaaTCGATTTTTCCAATCCATCATCAGTGATTGTGAAAAATTGC
AGGATTTCGATAGAacgaaaaaaattctctaaaaatattaagaatttaaa
GAATATTatgtttaattcttttttttttgtagatAAAATTTCACCCCTAT
CATTAGTACCTATTCCCCTAATTTGTTATAATTCccttcatttttgtaaa
tacaATTATTTGTTTCATAAAAGTAATTTATTTTCTGTCAAATAAATGAA
tcgagaaaagaaaagaaaaaaactctgAAAAGATCGAAACTGACGTTGTg
gaagattttttcattttcataccCCCGTCCTTATTGGAAGGTTGCCTTGG
TTGACTTTTAGTTTGATTACAG Run BLAST on NCBI protein sequence of TCONS_00000712-protein >TCONS_00000712-protein ID=TCONS_00000712-protein|Name=TCONS_00000712-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
MEAVDLKKIRKSLFGLPTTKVSRSLFGEVDHDEVKRDLEREYKELLDEKT
KLWNFDFERYQPRVDTESKLKWIPYSSPVTEHSIKSQTSLITSSTSCQTI
DYTSRFQRPADANLPKKIAKSPCVNNTKSRLNKTIKDTLKQSPKQQSTLF
ITNTDEESIKIVNESPIRNITSPKISEVPIEESKVKLDITKNLSRKRKRG
SQPTIDDFMKKKKPRTNMMEFKKDLSSPSRRRSGQIQQQI Run BLAST on NCBI transcript from alignment at sc0000005:762440..765012+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000712 ID=TCONS_00000712|Name=TCONS_00000712|organism=Clytia hemisphaerica|type=transcript|length=2573bp|location=Sequence derived from alignment at sc0000005:762440..765012+ (Clytia hemisphaerica)
AAACAATAgaactttttaaccaatcatAGCGTGTTTACATTTTAATAACA
ACCAATCAGAGTTGAGTAAATTTGTGAATGGGTTTTTTTAATATGTGTTT
GTTACGTTTATCATTTAGATATTTGATCTGATCGAGTTCAGTgatcagaa
aaaaaacagaacGAAATATAAGAAATAATAAGTAGAGAAGTATANTTGAT
CTGATCGAGTTCAGTgatcagaaaaaaaacagaacGAAATATAAGAAATA
ATAAGTAGACAAGTATAGtatttttttggtggaaaaaatGGAAGCTGTTG
ATTTGAAGAAAATCAGGAAAAGTTTATTCGGTTTACCGACGACTAAAGTG
AGTCGAAGTTTATTTGGTGAAGTGGACCATGATGAAGTGAAACGAGATTT
GGAACGTGAATACAAAGAACTACTGGATGAAAAAACCAAATTATGGAACT
TTGATTTCGAAAGATACCAACCAAGAGTGGATACAGAATCAAAGTTAAAA
TGGATTCCTTATTCATCTCCTGTTACAGAACATTCGATTAAAAGTCAAAC
TAGTTTGATAACATCCTCAACAAGCTGTCAAACAATTGATTATACTTCAC
GATTTCAAAGACCAGCTGATGCAAACCTACCcaagaaaattgcaaaatca
CCATGTGTAAATAATACCAAGTCACGgttaaataaaacaataaaggACAC
TTTGAAGCAATCACCGAAACAACAGAGTACTTTGTTCATTACGAACACCG
ACGAAGAAAGCATCAAGATCGTTAACGAATCTCCCATACGAAATATTACA
TCACCAAAAATTTCCGAAGTACCCATCGAAGAAAGCAAAGTCAAACTCGA
TATCACTAAGAATCTATCACGAAAACGGAAACGAGGGTCACAGCCTACAA
TAGACGGTATGTATTATACTATCAATGTAATTTTAATCTAAAGTGAGCCT
AATTACCCCTACTGTATTATACTCCTTAATAGTTAAATTTGCATCGATCT
TTCACAAATTGATCAGTTTTTTTGTCCAGTGACGAAAAATCATACGTTTT
TTTAGACAATTGATTTCTtaactttctctttttcttatAATTGTCACGAT
GTCATTGTTTACTGACGGGAAGTCTTAATGAGGGTGATTAAGGGGTCCAA
AATAAAGAAAGGGAGAAAGTTCTAGATTGTTATTGTCTAAAAAATGATGT
CTGAAAATAAACTTAAGATTTATTGATAACCCTCTTTGTAATGAAGTTGA
TAAAAGGCTACCTGGATTTGTTAAGTAGTTTTTATCAATTTGGAAAAGCA
TGGTCAGCTATGATAAAGCACGACATGACTCAGAGTGGttctaaaaaaca
agttttcccAATACTTTTATTTGATCTATAAATTATATACTAATATTTTG
GGACCAAAAAACCCACAAAATGAAAGGGAAAACATGTTTAGAACTGCTGG
GGGTCTGCTGTTCAAATGTGTCTTTTGTTAGCATTGTTTTAAAATGGTAT
AAGAAGAATTAAAATTCCGTTTCTTTACTATTTCAATATTCCActatttt
tattctattttctgTTATCTTTCTTTATTCAGActttatgaagaaaaaga
aacctCGAACAAATATGATGGAATTCAAGAAAGATTTATCAAGCCCCTCT
AGGAGACGCTCGGGACAGGTAAACATCCCTTTCTAAATAGTTTCTTATAT
ATAACATCAAGAAAGTTCCTATAAAAGgtatttttgcttaaaacgaAGTG
TATCCGAGATTTATATTTCCTGCTTTTTCAAGATgtgattttaagaaaca
tgGTTGTCTAGACCTCATGACGTAGTAATCAAAGTACGTCATTAGTTTTT
ACTGATATATCTGAGTGTTCCGTCCTAAATTTAAATACTAATATTGTAGG
TCTTACTCTGGACCTTGACCAACCACGAGCCCATTCAAAATATTTCCTAA
GGCATAGTAAATGGTTCTTTACATTGTATTCTGTATGCAGAAATTATAAC
AGGACTTTTTATCCCTCATTTCAGATTCAACAACAAATTTAATGAAGAAA
AGAATTGGCGTACCTTCGTTCGATTGTCAACCCAAGCCATCATCCACGTT
ATTTGGAATGGaccatattttttgtttgttttcttttgcGAAACTTAGAT
CAGCTATCAAAACATTGTCTTCTGTGAAGAACAACCAACAACattatttc
aatatttgaaTCGATTTTTCCAATCCATCATCAGTGATTGTGAAAAATTG
CAGGATTTCGATAGAacgaaaaaaattctctaaaaatattaagaatttaa
aGAATATTatgtttaattcttttttttttgtagatAAAATTTCACCCCTA
TCATTAGTACCTATTCCCCTAATTTGTTATAATTCccttcatttttgtaa
atacaATTATTTGTTTCATAAAAGTAATTTATTTTCTGTCAAATAAATGA
AtcgagaaaagaaaagaaaaaaactctgAAAAGATCGAAACTGACGTTGT
ggaagattttttcattttcataccCCCGTCCTTATTGGAAGGTTGCCTTG
GTTGACTTTTAGTTTGATTACAG Coding sequence (CDS) from alignment at sc0000005:762440..765012+ >TCONS_00000712 ID=TCONS_00000712|Name=TCONS_00000712|organism=Clytia hemisphaerica|type=CDS|length=2169bp|location=Sequence derived from alignment at sc0000005:762440..765012+ (Clytia hemisphaerica)
atGGAAGCTGTTGATTTGAAGAAAATCAGGAAAAGTTTATTCGGTTTACC
GACGACTAAAGTGAGTCGAAGTTTATTTGGTGAAGTGGACCATGATGAAG
TGAAACGAGATTTGGAACGTGAATACAAAGAACTACTGGATGAAAAAACC
AAATTATGGAACTTTGATTTCGAAAGATACCAACCAAGAGTGGATACAGA
ATCAAAGTTAAAATGGATTCCTTATTCATCTCCTGTTACAGAACATTCGA
TTAAAAGTCAAACTAGTTTGATAACATCCTCAACAAGCTGTCAAACAATT
GATTATACTTCACGATTTCAAAGACCAGCTGATGCAAACCTACCcaagaa
aattgcaaaatcaCCATGTGTAAATAATACCAAGTCACGgttaaataaaa
caataaaggACACTTTGAAGCAATCACCGAAACAACAGAGTACTTTGTTC
ATTACGAACACCGACGAAGAAAGCATCAAGATCGTTAACGAATCTCCCAT
ACGAAATATTACATCACCAAAAATTTCCGAAGTACCCATCGAAGAAAGCA
AAGTCAAACTCGATATCACTAAGAATCTATCACGAAAACGGAAACGAGGG
TCACAGCCTACAATAGACGActttatgaagaaaaagaaacctCGAACAAA
TATGATGGAATTCAAGAAAGATTTATCAAGCCCCTCTAGGAGACGCTCGG
GACAGATTCAACAACAAATTTAAatGGAAGCTGTTGATTTGAAGAAAATC
AGGAAAAGTTTATTCGGTTTACCGACGACTAAAGTGAGTCGAAGTTTATT
TGGTGAAGTGGACCATGATGAAGTGAAACGAGATTTGGAACGTGAATACA
AAGAACTACTGGATGAAAAAACCAAATTATGGAACTTTGATTTCGAAAGA
TACCAACCAAGAGTGGATACAGAATCAAAGTTAAAATGGATTCCTTATTC
ATCTCCTGTTACAGAACATTCGATTAAAAGTCAAACTAGTTTGATAACAT
CCTCAACAAGCTGTCAAACAATTGATTATACTTCACGATTTCAAAGACCA
GCTGATGCAAACCTACCcaagaaaattgcaaaatcaCCATGTGTAAATAA
TACCAAGTCACGgttaaataaaacaataaaggACACTTTGAAGCAATCAC
CGAAACAACAGAGTACTTTGTTCATTACGAACACCGACGAAGAAAGCATC
AAGATCGTTAACGAATCTCCCATACGAAATATTACATCACCAAAAATTTC
CGAAGTACCCATCGAAGAAAGCAAAGTCAAACTCGATATCACTAAGAATC
TATCACGAAAACGGAAACGAGGGTCACAGCCTACAATAGACGActttatg
aagaaaaagaaacctCGAACAAATATGATGGAATTCAAGAAAGATTTATC
AAGCCCCTCTAGGAGACGCTCGGGACAGATTCAACAACAAATTTAAatGG
AAGCTGTTGATTTGAAGAAAATCAGGAAAAGTTTATTCGGTTTACCGACG
ACTAAAGTGAGTCGAAGTTTATTTGGTGAAGTGGACCATGATGAAGTGAA
ACGAGATTTGGAACGTGAATACAAAGAACTACTGGATGAAAAAACCAAAT
TATGGAACTTTGATTTCGAAAGATACCAACCAAGAGTGGATACAGAATCA
AAGTTAAAATGGATTCCTTATTCATCTCCTGTTACAGAACATTCGATTAA
AAGTCAAACTAGTTTGATAACATCCTCAACAAGCTGTCAAACAATTGATT
ATACTTCACGATTTCAAAGACCAGCTGATGCAAACCTACCcaagaaaatt
gcaaaatcaCCATGTGTAAATAATACCAAGTCACGgttaaataaaacaat
aaaggACACTTTGAAGCAATCACCGAAACAACAGAGTACTTTGTTCATTA
CGAACACCGACGAAGAAAGCATCAAGATCGTTAACGAATCTCCCATACGA
AATATTACATCACCAAAAATTTCCGAAGTACCCATCGAAGAAAGCAAAGT
CAAACTCGATATCACTAAGAATCTATCACGAAAACGGAAACGAGGGTCAC
AGCCTACAATAGACGActttatgaagaaaaagaaacctCGAACAAATATG
ATGGAATTCAAGAAAGATTTATCAAGCCCCTCTAGGAGACGCTCGGGACA
GATTCAACAACAAATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000712-exon-sc0000005-1491911889:762440..762628 | TCONS_00000712-exon-sc0000005-1491911889:762440..762628 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1510915933:762440..762628 | TCONS_00000712-exon-sc0000005-1510915933:762440..762628 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1575043694:762440..762628 | TCONS_00000712-exon-sc0000005-1575043694:762440..762628 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1491911889:762698..763345 | TCONS_00000712-exon-sc0000005-1491911889:762698..763345 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1510915933:762698..763345 | TCONS_00000712-exon-sc0000005-1510915933:762698..763345 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1575043694:762698..763345 | TCONS_00000712-exon-sc0000005-1575043694:762698..763345 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1491911889:764022..764107 | TCONS_00000712-exon-sc0000005-1491911889:764022..764107 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1510915933:764022..764107 | TCONS_00000712-exon-sc0000005-1510915933:764022..764107 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1575043694:764022..764107 | TCONS_00000712-exon-sc0000005-1575043694:764022..764107 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1491911889:764464..765012 | TCONS_00000712-exon-sc0000005-1491911889:764464..765012 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1510915933:764464..765012 | TCONS_00000712-exon-sc0000005-1510915933:764464..765012 | Clytia hemisphaerica | exon |
| TCONS_00000712-exon-sc0000005-1575043694:764464..765012 | TCONS_00000712-exon-sc0000005-1575043694:764464..765012 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:762440..765012 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003175 | CDI |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007050 | cell cycle arrest |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007050 |
cell cycle arrest |
| cellular_component |
GO:0005634 |
nucleus |
| molecular_function |
GO:0004861 |
cyclin-dependent protein serine/threonine kinase inhibitor activity |
Blast
The following BLAST results are available for this feature:
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