Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000706 ID=TCONS_00000706|Name=TCONS_00000706|organism=Clytia hemisphaerica|type=transcript|length=236bp
ACTCCTTTCACGGTTGTTGTTGACAACACACGCAACGCTATTGTTATTTC
GTGCAGAGGGACTTTGTCGTTACACGATATTCTAACGGATTTGGCAATTG
AAGAAGTAAGTTTACCAGGTTGCGATGAAAAATGGACTGCCCATAAGGGG
TTCTTCGAAGCAGCTACAGCAATCAAGGCAATCATTGATGAAAAAGATTT
GATCAAGCAAGCACAAAACTTTGACGTGgaTAAAGG Run BLAST on NCBI transcript from alignment at sc0000005:596714..598118+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000706 ID=TCONS_00000706|Name=TCONS_00000706|organism=Clytia hemisphaerica|type=transcript|length=1405bp|location=Sequence derived from alignment at sc0000005:596714..598118+ (Clytia hemisphaerica)
ACTCCTTTCACGGTTGTTGTTGACAACACACGCAACGCTATTGTTATTTC
GTGCAGAGGGACTTTGTCGTTACACGTAAGAATAAATTATTCTACTTTGa
ccaattttaaagaaaaagagcAGGGAATGTTATCTAGAATGGGTTCTCAT
CATTAGTTTACTCTCAATATAAGttctaccttcgggtagacagctagaga
aaaaaGAGCGCTCTGGTCGCCTTCAACTTCGCgaaaacttacttacttat
aagTTATACTTAAGAAAACTATCAATTGTTCCATTTAGCTTACCTTGAAA
ATTTCGACGAGGTCCATAACCATTTTTCACGGTTCTAATCTATAAATAAG
AGTCAACgcctaaaattttacaacaaacTTTTATAGCTATCTATTCCTTA
AGAAAGGTGCTCTGTATCAGAGTGCATCCCTCGTATGATAATATAACGAA
GTAACGATTTCTGTGTAGGTGAATTTTATATTTCCGTAGATATTGGGTGT
TTTTACAGAcgataagaaaaaataacttaattcaatttcaattttactaT
CAAAATCCTTTGCTCCCTTGGTTTAGGATATTCTAACGGATTTGGCAATT
GAAGAAGTAAGTTTACCAGGTTGCGATGAAAAATGGACTGCCCATAAGGT
AAGTTCGCCTCAAAGTGTATTTTTAGCAACTTTAGAATATAAACTTGAGC
AGGAATTGTGTTCTGGATAAATCTTCTTACTCGCATCTTCTTTGGTTCAA
AGTCGAGTTTTCCGATGCAATTTATCATTTCAGTGTCAATTTTCAGCTCA
TCTCTTAATTCTACTCATCGCTTAATTCTACTCTAATATAAAGTTCTAAG
TTTCAAGTAATTTTTATCACTGACTGACCTTTTCATCTATTTAGGGGTTC
TTCGAAGCAGCTACAGCAATCAAGGCAATCATTGATGAAAAAGATTTGAT
CAAGCAAGCACAAAACTTTGACGTGGTAGGTGAAAATTCTATGATTACGT
TATACAGACAAAATTATAGatataaaacgtcatattttaACGGCCCGTGG
ACGCAGCTATCTACTATAACATTTAGCGTTATTTAGAGAAGAAGCAGGAA
TTTATTAGGAAATGTGATCGGAAACTGACAGTAATGATAAGCTTTTGCAC
CTTGACGCTACTTCCATCCTCAATACTTTGTCTCTTTTCCGTGCATTATT
ATCGAAATATTTTGGATCAAAATGTTTTAACATTCCTTAAAGATATCTCT
GttgcaaaaaaagtaaacaatattAACCTCTTTAATGTATCCATATGTAT
CTATCGTATTAAAAAAGTCTTTCCTGTTTTTACGATTCGTTTTTTGATGT
TTAAAAATATCCGtatcggaatttttttttcactttttctttttaaggaT
AAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000706-exon-sc0000005-1491911889:596714..596788 | TCONS_00000706-exon-sc0000005-1491911889:596714..596788 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1510915933:596714..596788 | TCONS_00000706-exon-sc0000005-1510915933:596714..596788 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1575043694:596714..596788 | TCONS_00000706-exon-sc0000005-1575043694:596714..596788 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1491911889:597290..597361 | TCONS_00000706-exon-sc0000005-1491911889:597290..597361 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1510915933:597290..597361 | TCONS_00000706-exon-sc0000005-1510915933:597290..597361 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1575043694:597290..597361 | TCONS_00000706-exon-sc0000005-1575043694:597290..597361 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1491911889:597608..597688 | TCONS_00000706-exon-sc0000005-1491911889:597608..597688 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1510915933:597608..597688 | TCONS_00000706-exon-sc0000005-1510915933:597608..597688 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1575043694:597608..597688 | TCONS_00000706-exon-sc0000005-1575043694:597608..597688 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1491911889:598111..598118 | TCONS_00000706-exon-sc0000005-1491911889:598111..598118 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1510915933:598111..598118 | TCONS_00000706-exon-sc0000005-1510915933:598111..598118 | Clytia hemisphaerica | exon |
| TCONS_00000706-exon-sc0000005-1575043694:598111..598118 | TCONS_00000706-exon-sc0000005-1575043694:598111..598118 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:596714..598118 + |
Blast
The following BLAST results are available for this feature:
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