TCONS_00000701 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000701
Unique NameTCONS_00000701
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2970

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000701 ID=TCONS_00000701|Name=TCONS_00000701|organism=Clytia hemisphaerica|type=transcript|length=2970bp
aTTACTTTTCTCTCTAGAGATATTGATGCTTTTTTTCAAAACGCATGAAT
CGATTCTCTAGAGAGTAATAGAAAAATACCAGATGAAGGGTCAGTCAGTC
TCAACTATTTCCAGTGCTGGTTTGATCCAAAGGCTAAAACTCTGGTGGTA
GAATTTTGTCTGAGAAATCGATTAAGATCGATGCATCGGCGTATGCAAGA
TATTACAGTTGTATAATGTCAAACCGTGTAGATAACATTGTTATAACGTT
ATTCTCATGGATATTATTAACTGGTTTAACGAGAAGTTATAAAGGAGTGT
TAAGACAGAGCAATGGTACTGATATTGAATTGAGGAGATGGTACAAAGAT
CTCCAAAGATGTGGTGAAACCTTCGTGGTGACACAAAATCAACCAATTTT
GTTTGATGATGAGACTTGTGGATATACATGTCTTTGGCAGGATGGAGTGC
CATCCTCGTCAAATGAGGTGCAACCAGGGGGTGGATTGACGTgcgaaaat
gaccaaaatataAGACAAGATTGCAATACTGGAGGAATAGGAAGCCAAAT
TGACCAAAACAAACTCATCCAAGTAATGACTATCGCCGATTTAGATCAAG
AACAAACACTCTACCATCTTGACAAAAAGCTATCACGCTGTGAATTCATT
GAATCGTCATGTGGTAAAGTGGAATACAAAGATGCATCCAGTGGAACGTG
GAAGAATACGTCGTTACACACGTGTTTTGATATCTCTATTCAACATGAAA
ACCTTTCAAATTCTACAGCTGTGCTTAGGGTGACTTGTTCAGATGAGAAA
AGGAAGCAAATGGAAGGACAGTTaatgaaaattcaaatgaaATGCCATGT
TGATGATGAAAAGAAAGATTATCAAACATGCTTCATGTTCAAAGTGGAAG
GTCAATCTCTCGTATCAGAGGAAAAAGAAGACCTCGAGAAAGTTTGCATC
ATACCACCAACTGTTCCAGTGACAACACTTGGTCCAATCATCTCGACAAC
ACTTGGTCCAATCATCTCGTCAACCAATGACCCATCTTCAGATGACAATG
ACGAAGGTGTTCCTCTCTACGtcatcattatcatcatcatcatcatcatt
gtgATTCTGTTGATCGTGATCGCTATAATTCTCTATTGTTGctgttataa
aagaaaaagAAAATCATCAGAAACAAAGACAGTTAATGGAATCGAAAATG
CGAGTGCGATATTTGACGAACCACGTTCAACAAGCAGACAAGGTGACACA
TCAGTCATCCGCCCACCACCACCGCCCATGAATCGATCGAGACCAAACTC
CGTATCTGGATTCAAAAACCCTCTATTCGTTGGGGACCCTGATACAGCAA
CGACAAACACTAAACCAGAATACGCTAAAGTGAATAAACAATCTAAAAAG
CAAAAACCAGTTAATACACAAGGGAATACTTTAAAAAACCCATCGACAGG
TTTGTATGAGGAAATTCCCATAGATGGCAACCAAAATGATACTTTAGAAG
AAAATCGACATAATTCATCGACAAAAAGTAATGCTTTAAAACGACCACCC
AGCTTTGGCAAAGGTGACTATAATCCGTATTCTGAGATAGATGACCATAA
GGAAGATCAAGGAACAACagataaaaagaaattaaacagAATTGCTTCTG
GTAAAGGGACACTGCAAGATTTACCTTTCGATACAACCAGACCAACAACA
GAGAAAGTTCCCATTTACAACAATTCGTCCATCCCGTCTACACCAATCAC
CACACTTGGAGATCCTGTCAACCTTGAAGAAAATGCACAACCAATCTACA
ATGATGCTCCACTTTCCAATAGTACAGACACTCTATCAACACCAGATGAA
CTATACCAACAGCCTACATCTCAAAGGCAACCATCATCTACTGATAGTAT
ATACAATGTACCTTCTTCGCCAGTCGAAACATACGACTTCGTTCCTCTAA
CAAAGAAAGGGAACACCAATGAAAAAGCCTTTGCAAATTACCGAAGATCA
GTTCCACCagaaatcaatctgaaacgTTTACCATTTACTTTCTTGGATTA
CACAACACGTGACCCTGAGTTACCCAATCATTCGTCGCCAGCCTTCTATC
TACTATTTGCCAACTATTACTTACAAATCAAGGAAGAGGTTGAGGAGATG
CAAGACTTAATGACCAAGATCCCAATATTGATGAGAACAGCTGAGGATAT
GTGGTCAGGTCTTGAGGACCATGGTGATGGCACCACTGTTGATGAAGCTG
GATATATATTAAAATCATCCTTACGTAAACAAGATATTATGTTTAAGTTG
GCAGAAGAGTTAAGCTGGAATACAGAAGAAGCTAGTTTATCACCGTTTGA
AACATTACATTCCCTATACACCAAATGTATCGAATCAAACAAACGACAAT
GTTTGGTTCTAACTTTCCACGACCGAAAGACTtgtatttgtttatttgat
ggTCAAGGGAATCAAACTTTCCTAGATTTGAATATccattataaaaacaa
taaacaaaCAGCATTGGAAGCTCTTGGAGACGAAGAATGTGGAGGAGTTA
TTGGTGAATGTGGTCGAAGACATTCAGATTCAATGTTGAATTATATTTTG
ACCAATATGTGTTTAGAGATGAATTGCACTGCTAGATCTGGCAATGCAGT
CCATGTGCACCACAAACACCAAAACTTCGGCGAGCCTTCTAAGCCAGCTG
ACTTTATTTGAATTCATAAGGCACATCAAGATACAAGCAGAGGTCGAGGC
TTTGTTGCTATATGCATGCACACTAATCCTTAGAAACCCTTGTATGTATT
AGAcataagtaatttttttttacatttaaataaaattattttttgaacta
GTTTCTTGGGCCGCCAGTTTATCCTTCGTGTAACTTTTAGAACAGGAATA
TGGCTTCTGGAAAATTACACActttcattgtctgtaaaagCTAAAAACGT
ATAAAATCATTCCAGAAAAC
Run BLAST on NCBI

transcript from alignment at sc0000005:540415..554298+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000701 ID=TCONS_00000701|Name=TCONS_00000701|organism=Clytia hemisphaerica|type=transcript|length=13884bp|location=Sequence derived from alignment at sc0000005:540415..554298+ (Clytia hemisphaerica)
aTTACTTTTCTCTCTAGAGATATTGATGCTTTTTTTCAAAACGCATGAAT
CGATTCTCTAGAGAGTAATAGAAAAATACCAGATGAAGGGTCAGTCAGTC
TCAACTATTTCCAGTGCTGGTTTGATCCAAAGGCTAAAACTCTGGTGGTA
GAATTTTGTCTGAGAAATCGATTAAGATCGATGCATCGGCATACAAGATA
TTACAGTTGTATAATGTCGAACCGTGTAGATAACATTGTTATAACGTTAT
TCTCATGGATATTATTAACTGGTTTAACGACAAGTTATAAAGGAGTGTTA
AGGCAGAGCAATGGTACTGATATCGAATTGAGGAGATGGTACAAAGATCT
CCAAAGATGTGGTGAAACCTTCGTGGTGACACAAAATCAACCAATTGTGT
TTGATGATGAGACTTGTGGATATACATGTCTTTGGCAGGATGGAGTGCCA
TCCTCGTCAAATGAGGTGCAACCAGGGGGTGGATTGACGTgcgaaaatga
ccaaaatataAGACAAGGTAAGCTTGAGTATTTGAAAATCGAAAACTTTA
TTGTTCAGAACAAGAAGTTTTGGGGATGAAGTAAGATTCCATTTTTTATT
GGATTCGGTTATCCCGTAATAAGTATGGTATTATCGTACAACGTTGCTGT
TTTAAACGACTCAAGTAAACCAGAAATTCCCTAACATATAGAAAAGTCAC
AAATCAAATGTCAATCAGGGTAAGGATTCAATGATGGTCATATCATGAca
tacccctgtctcgcagccccggtggaacttttttcctccagtggggataa
aaattcctattgaaatcccaattgtTTCAAGATTATAGAATCCAGTGGCA
ATGgctttgaagtgcaatttttaaacgttaaatttcgaatggggataaaa
taaaagttaagtccaagtgaggctgaaattctaaggtattttcccaccgg
gacgaaatttttgtcaatctttctcagcgggtctatgacacaggggtatC
ATGATGTAACAATGACGTAATAAACACTTGCATGAAAAGTGGAAACGTCT
GTCCGGATGGAAGTCTGAATAAATGGGTAAGGAAGTATTTCAATAGATCA
TTATGTAATTAGGAAATTAGCTTAATACGAGCTAGAACAGTTCGAAGGAA
GCACTGTGCAGTAGTATATAATATGATTTGAGTGATATGTGTAATATTAC
TTTGAATCTAAACTAGTTTGTaaaacagcatgaaaacactGTTCTAAACG
AATGTTTCAGAATTGTAATNTGAGAAATCGATTTAGATCGAGGCATCGGC
GTATGCAAGATATTACAGTTGTATAATGTCAAACCGTGTAGATAACATTG
TTATAACGTTATTCTCATGGATATTATTAACTGGTTTAACGAGAAGTTAT
AAAGGAGTGTTAAGACAGAGCAATGGTACTGATATTGAATTGAGGAGATG
GTACAAAGATCTCCAAAGATGTGGTGAAACCTTCGTGGTGACACAAAATC
AACCAATTTTGTTTGATGATGAGACTTGTGGATATACATGTCTTTGGCAG
GATGGAGTGCCATCCTCGTCAAATGAGGTGCAACCAGGGGGTGGATTGAC
GTgcgaaaatgaccaaaatataAGACAAGGTAAGCTTGAGTATTTGAAAA
TCGAAAACTTTATTGTTCAGAACAAGAAGTTTTGGGGATGAAGTAAGATT
CCATTTTTTATTGGATTCGGTTATCCCGTAATAAGTATGGTATTATCGTA
CAACGTTGCTGTTTTAAACGACTCAAGTAAACCAGAAATTCCCTAACATA
TAGAAAAGTCACAAATCAAATGTCAATCAGGGTAAGGATTCAATGATGGT
CATATCATGAcatacccctgtctcgcagccccggtggaacttttttcctc
cagtggggataaaaattcctattgaaatcccaattgtTTCAAGATTATAG
AATCCAGTGGCAATGgctttgaagtgcaatttttaaacgttaaatttcga
atggggataaaataaaagttaagtccaagtgaggctgaaattctaaggta
ttttcccaccgggacgaaatttttgtcaatctttctcagcgggtctatga
cacaggggtatCATGATGTAACAATGACGTAATAAACACTTGCATGAAAA
GTGGAAACGTCTGTCCGGATGGAAGTCTGAATAAATGGGTAAGGAAGTAT
TTCAATAGATCATTATGTAATTAGGAAATTAGCTTAATACGAGCTAGAAC
AGTTTGAAGGAAGCACTGTGCAGTAGTATATAATATGATTTGAGTGATAT
GTGTAATATTACTTTGAATCTAAACTAGTTTGTaaaacagcatgaaaaca
ctGTTCTAAAGGAATGTTTCAGAATTGTAATGTATCATAGATTAAAACTC
TATGTATTGGTATTATAGTGTCCAAAGCATTTTTAAGtagtgttttgatt
tttagcGATTAAAGACTAGCTTTAATGCTGTATAATATTTTCTTGGACTA
TCTCAGCCCCCTCCCTAATTTAGCATTCGGCCATGAGTTGTCAAAAACTT
GAGCATGTATTCCTCCCGATTTAGAGCTTTGttagacaggaacccgtctg
cgtatttttttaaatctgatgaatacttgacgggtcagagctgtgagtcc
gattttggcctcaaaaaaattacagtgggaaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTattaggatatgggaaatt
caaactgtcagcccataccatgctatatatttcgccatcagtatatagaa
taagaaatcatagcatggatctccaggctagagCTTTGTATAATGCGatg
ttattttgaaactttcagaaatgttcctattttttgttaatttcgtACTC
GAGATTCTATCGGAGCTAGATTCAAACTCAAGCAAAATGTGAAAGCATGT
CATCCTCAAATCGAGGTTAAGAGGTGTTTTTGAGCTTGATGATGAAACAA
AAGTTTAATCCAACACTCTTACCTCCTGACTCGGTCTTCTATTCTTTCCT
GCCTTTCCTGTTTTCAAAGAGGTCATACGAAAGTCCTAAAAACCCACGAT
GAGGATATTAATGTCGCATTTCTTATGGGGACAAGGGGTAACCGAACTCT
TTTCAATACCCAGGGATATGACACGTGTTGTATTTCATcattttaaatga
tcaattcaATCTTGATAAACATTTTCTTGAAGCAGTCGGATTTAATTATG
TGTCAAAAACATAAAGTTTCAAGATTAAAGATCAAGGATGATAATAAAAA
GGCTTCAAATTCCGGGACAGGGTTCCTAGGTAAATGGATGATACGGGTAT
GTcccgcccttaagggtgcccTTTTTTTGGGCCTCATAACTCCGCTAAGG
ATAAATCAGTCAGTTAGAAAGAGTCACAAAAACGGTAAAAATCCCGAAAA
CTACGACTTTTGTTTCTCGAAGCCTAAAATTCGTCCCGAAATGTTCTTAC
TCGAAAAATTCCAATTTCCAAAAATCGGTCGACACAGTCCGTCTAGTTTT
ATCTggataaaatgattttttacagggattttatttcattgtttttgata
ttttaatggGATTAAATTTTTGCAGGTATTAAATTTGGCTGTTGAGCTCA
TCCGCAAAATTCTAAGATTTcgtggggatttaatttcgcggatggttCAA
TTGTGAATtgatattttcacgattttgtgctatttttgcttttttagtaT
CTTATTTTTTAGTATCCAAAAAAATTCGCAGATAGgaccttttcaaattt
ccattgggacttatttttgtggatgacacccaaatctaCGAAATGCGCAA
AATTTAATTCccacgaaaattaatcccattaaagtataaaaGAAGGATTG
TACtttaaaaagactttgaaacaaTTACTCTAATAAACAAGGGATTTGGA
ATAACCAAGGTGGTTGGAAAAATTCGCAAAACTTagtaagcggggggggg
ggggttgtaataaaaatgtccttggcggaaaatatttgaaaaggaggcta
atacagcagaattagggcaaaagaaagaactttcaaaaacattttcccaa
acaTTAATAAGCGGGGGTTTGGAATGAGAAAGTCCTGGACGGGAAATTTC
CACAAAATTAATTAGCGAGGATGACGCTTAGTAGGTACCCAAGAGAAGCC
AGATAAAATTGGACGGAAAATAACTACTTTGGACGATTTATCAGAAATTC
CAGGTCTCTTGCAGGTCTCTTGTCGATGAGAATAAGAATCTACACAATAA
ATAAGTTGTACAGCAGACAAGACAAGAAGGAGTGGGATTAGGATTACAGA
GCTTATATGTCTATCACAACACTATGTTAATTAGTGATGTAATTAAATAT
GAGGCAATGATTCAAATAGGAAATTACTGTAAGGCATTCTTCTGtaaaaa
agtagaattttaaacTCGAATTGACAGTGCTCGAAGTAACACAAAAGAAA
CACCCCAATCACCATCCACACAACATAAAAACCATCGAAATATCATCCAC
ACAGCATAAAAATACCATCTAAATATCATCCACACAACATAAAAATGCCA
TCTAAATATCATCCACACAGCATAAAAAACCATCGAAATATCATCCACAC
AACATAAAAACACCATCTAAATATCATCCACACAACATAAAAACACCATC
CAAATATCATCCACACAGCATAAAAATACCATCTAAATATCATCCACACA
ACATAAAAACACCATCCAAATATCATCCACACAACATAAAAACACCATCT
AAATATCATCCACACAACATAAAAACACCATCTAAATATCATccacacaa
aataaaaacaccATCTAAATATCATCCACACAACACAAAAATGCCATCTA
AATATCATCCACACAACATAAAAACACCATCGAAATATCATCCACACAAC
ATAAAAATGCCATCTAAATATCATCCACACAACACAAAAATGACATCTAA
ATATCATCCACACAACATAAAAATGCCATCTAAATATCATCCACACAACA
TAAAAACACCATccacacaaaataaaaacaccATCTAAATATCATCCACA
CAACATAAAAATACCATCTAAATATCATCCACACAACATAAAAACACCAT
CTAAAGACAAGGAGCAATTGACGAGTTTGCCCTTTGAAAGAAAAGCAcaa
aaattccaaacttcaaaaaaactcctTAGAGATGAAAAACATAAGACAAC
ATgtataacagatttgcaatctcttatttttaaataaaaatattgttttc
aacCTGTTTTTATCTTCCAAAAACAAGCTCAAAATCGAAAATCGCCATTA
CGCTACCGGGACACCAGTCATCAATGAGCTTTAGGCGGGCCCCGGGCTAA
ACATGACCAAATCTACAAAGAGTTTGGAAACAattctagtcgcgagttag
ggagttgctagtttcgagttggggagttaaaaaattaccggctaccgaaa
aagaataacatacatcaaaagtacgattttgaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATttgtttaaattagaaaattt
tcggtcgccgtaaatttttacgaactccccaactcgaaactagcaactcc
ccaactccccaactcaccaactagaacattacctagactcatctacaaaa
tcaaaacattgaaaataaaatctaaattatAAGAGTCTTTTAAAACTTCA
ATTTATACTTCTTAGATTGCAATACTGGAGGAATAGGAAGCCAAATTGAC
CAAAACAAACTCATCCAAGTAATGACTATCGCCGATTTAGATCAAGAACA
AACACTCTACCATCTTGACAAAAAGCTATCACGCTGTGAATTCATTGAAT
CGTCATGTGGTAAAGTGGAATACAAAGATGCATCCAGTGGAACGTGGAAG
AATACGTCGTTACACACGTGTTTTGATATCTCTATTCAACATGAAAACCT
TTCAAATTCTACAGCTGTGCTTAGGGTTggtgtacatgttttttcttttg
cttgaaaacgaaagcgaaagcaaCTGGGCACTAAGGTTTATTTGTTATTT
ATGTGCATGATTGACAGTTGATTTNCCTTAAGGTTGGTGTATatgttaaa
tattttctataTTGAAGTACTGTTTGAATTCTCTAAAAATGTATGTAATT
CGTTCGCGTTGTACAATACATACATAGTGCATGGGCAATactaatctcat
aacagatcatccattatGTACATACCACACTCTGTTCTAAAGGGATATGT
CAATTGTGacgatctgacctggttgttcagccaaaacattcaaaaccacG
TTgtcttttgcttgaaaacgaaagcgaaagcaaCTGGGCTCTAATGTTTA
TGTGCATGATTGACAGTTGATTTTAATGCGATTGTTTTGCTTCAGCCAAT
CAACGCGCTCAAATGTTCATTTAATTTAACATTTCCATAACACAAATATT
CAGGTGACTTGTTCAGATGAGAAAAGGAAGCAAATGGAAGGACAGTTaat
gaaaattcaaatgaaATGCCATGTTGATGATGAAAAGAAAGATTATCAAA
CATGCTTCATGTTCAAAGTGGAAGGTCAATCTCTCGGTAAGTTGAGTTCT
CGGCTGGTACACAACATTTGTTTCAATGATCATCCAAGGTCCATAACGTC
CATTATAAACATTAGATGATATATAATCTGCCGTTTTAGAAACCTTGTCT
AAAACAATTATTAGGTCCAACAAGAACTAAATGATGCCTCCATAATtaca
actttgttgtcattaaaatattataaatgAATTGATTGGTATGTGCCATT
CTCAGCACAAAAATGCAACCCCAATATCGAGATTTaccaagaaaaacaaa
acaacaaaataaaccaATCTTCACCCTGTACCATCCTAAACACCACAAAC
GATTTCTTGACTTTCTTAGacggtatttctattttcaatgaGAAAGGATC
TGTACAGGCTACCTTATCATgtaatattttcaatttcaatttaatagTAT
CAGAGGAAAAAGAAGACCTCGAGAAAGTTTGCATCATACCACCAACTGTA
AGTTTTAGCAATTGCCATTCAAACTGCATTGTACCAAATCAAAGGCAAAT
TAATCAATCGTGAAATCCCATCTCAAATATCATTACACAATGATGCATAA
TTCATGCTATAGCTGAGGTTTCTGGGTAAAATTCGAAGTCCCAATTTTGA
GGTGCGAGGTTGTTTAATATCAGTCGATTTGTTACCTTGAGTGACACATA
AATTAGGTCATAAAATGTTTACTATTGCTGTCAACACGAAAAGATCTATT
CTTCTGAGATTCGCAGCTTGCATTTCAAAGAAAGTTTAAGATGTGGATAG
TGTTCTATTTTATTAATCATGTTTGTATACACGTTAAAATACCCGACCAT
GAAATCGTCATTGTATTCGCTATTCGATTGAGATCGACTTGATCAAATCG
ACTCGAGCGCTCAATTTAgctcgattgattcgattacCGATTCCGTTCAA
CAGACATTGTCTGACTAATCTTGCCTGCTGTACCTTGGATATTGAAATGG
ACAGCCAGCCTTTAGAGAACACAATAGATCTTAtcgaagtttttgatttt
tctaaaaagcgatgcattgggGGACTATTTCGGGGGTataacaatagaaa
tctcttagtaATTCCTCGagagaattctattgtaatacccccgaaacaat
cccacgatGCATcactgttttagaaaaatcgaaaactccgataaggtcta
ttctgaaactaattttctttaaCTCAATAAGTGATCAACATGGATTCCCT
TATGATCACCCTTAATAAAGTTTATACTCATGACATCGTAGATATAGACA
AAGACCTTTACGACATGACCCTATTCAGGAACACCCCCGTTTTCATAAAT
GATACAAATTTAAGAAATCAGTACCTTAACTCCAACACAAATAAGTGAAA
AGAAATAGAATTGTCTCATaccattttacttttgtttagGTTCCAGTGAC
AACACTTGGTCCAATCATCTCGACAACACTTGGTCCAATCATCTCGTCAA
CCAATGACCCATCTTCAGATGACAATGACGAAGGTGTTCCTCTCTACGtc
atcattatcatcatcatcatcatcattgtgATTCTGTTGATCGTGATCGC
TATAATTCTCTATTGTTGctgttataaaagaaaaaggtaaAAAGGATAAT
TATATGGCTAGAACATTGATTTCACAGCCCCGAAGGTGCTAGATTCGAAA
CTCCTGGATGGGGAATCACGTtgcttatttcccatccagaacacgtGAAT
GCGGGGCAAACTTAAGGCTTCCTTTTTTCTTACTTAAgataggttgaaga
ttcctctctagccccttCGAGGCTTCACACTCGAtaagtttgaaatattt
cgcCTGTAAAATTCTTTCACAGTCTTAGACGAAACCTCCAAAACAGACAT
CATATATATTTCGCTCGACTATGGAATGTAGCTATTTTAACATTAAAAAC
ATTTCATCTTTTACTCAGAACATCTTATCTTGGTGAATTTTTCCGGATTT
GCTTCTATATTCAATACCAGATTACTTATAAAAAAGTCAATCAATTTTAA
AGTATAATAATATTACCTGAGAGTaatcctttttttttcattcgcTTCTA
TTTAGAAAATCATCAGAAACAAAGACAGTTAATGGAATCGAAAATGGTAA
GCTTTTTACATTTTAACACTCCTGTCTGACAGCCCCGGTTGAACTTCTTT
GAGAGCCCCGGTTGAACTTCTTTCCTAAGTTGGGATAAAAATTCatattg
aaattccaatggaGATAGAAATTCGATTGTTATAAGGTTGAATAATCCAT
TGGGGattgttttggagtgcaatttttgagCAGGGAtgaaatggggatga
aatcaatttcccagtggggctgaagtACCAGGGTATTcccccaccgggga
cgaaatctttgctaaattttccagtggggctggggtcccagcgggtctgt
gacacaggggtgttttttcaAGGTTAAACAAGAAACACGTGAAGTGGAAT
TCAAGTGCTGATGAATCTGTGGGTGGATTCAATGGTGTTGGTAATCAAGA
CGGAGAAGCCTCTAGCCCCCAttattgaattcaccagcaccattccACCA
ACAAAATCATCATCACTTTTTAGTTGGTTTAGTAATTTCTCAGTCAACTT
ACGACTTACCACCAATAACGTGGTGGTTCGATCAAATTATGGCAAACTAG
GAATTTACCAAAGTTAGTATTTCGAACAATTGCTTGAGCGAAAGTTTTTG
gatattttcctctttttggctgaaaactaCTAATTTTAGGGcgtgtaaaa
aaataaataggcaCCGGAATTTGCAATCAGCGACGCTTACAAAAAAATTG
GCTGCTCCCTGCCATCATGCTTCTGCTTGGCATGCAAATTAACTTAGAAC
CCATAAGTCTGAATGATAATAACATGCCATAGTACTACTCGGCAGATAAT
CATGCGTGACAAAAATAACCAAAGATGTGGATAGTGTTTTTTGAAGAACA
TGAATATAGTAAAAgacaaagatgaaaatgaagacaaTCCAAGATaggta
aatcttttttcaacCATTTCTTCATATTTATCGAGAATtcttttccacaa
aaattttaacATAAGCGAAATAGAAAATTACTAGACATTGACAGTAGATT
CTTTCTCGTCTCTTTTAGAAGGCGATATCCTACGACATCAGCCCCATTGA
TGACAGaccaaaaaaaatggaaaagaatTCTCAAATGGAAATGgttgaaa
aaagatttaccttctaatctaaaaatcaaaaatatctgTCGAGTAGACGG
tgacaaaataaacattttgcaATACAAAAGCTAAATGATATCAGGGAATG
CGTAATAAAAAACTTGTCCTCCAGGCATATCATCAAATTCAATATCTAAT
TTACTATTTTATAGCGAGTGCGATATTTGACGAACCACGTTCAACAAGCA
GACAAGGTGACACATCAGTCATCCGCCCACCACCACCGCCCATGAATCGA
TCGAGACCAAACTCCGTATCTGGATTCAAAAACCCTCTATTCGTTGGGGA
CCCTGATACAGCAACGACAAACACTAAACCAGAATACGCTAAAGTGAATA
AACAATCTAAAAAGCAAAAACCAGTTAATACACAAGGGAATACTTTAAAA
AACCCATCGACAGGTTTGTATGAGGAAATTCCCATAGATGGCAACCAAAA
TGATACTTTAGAAGAAAATCGACATAATTCATCGACAAAAAGTAATGCTT
TAAAACGACCACCCAGCTTTGGCAAAGGTGACTATAATCCGTATTCTGAG
ATAGATGACCATAAGGAAGATCAAGGAACAACagataaaaagaaattaaa
cagAATTGCTTCTGGTAAAGGGACACTGCAAGATTTACCTTTCGATACAA
CCAGACCAACAACAGAGAAAGTTCCCATTTACAACAATTCGTCCATCCCG
TCTACACCAATCACCACACTTGGAGATCCTGTCAACCTTGAAGAAAATGC
ACAACCAATCTACAATGATGCTCCACTTTCCAATAGTACAGACACTCTAT
CAACACCAGATGAACTATACCAACAGCCTACATCTCAAAGGCAACCATCA
TCTACTGATAGTATATACAATGTACCTTCTTCGCCAGTCGAAACATACGA
CTTCGTTCCTCTAACAAAGAAAGGGAACACCAATGAAAAAGCCTTTGCAA
ATTACCGAAGATCAGTTCCACCagaaatcaatctgaaacgTTTACCATTT
ACTTTCTTGGATTACACAACACGTGACCCTGAGTTACCCAATCATTCGTC
GCCAGCCTTCTATCTACTATTTGCCAACTATTACTTACAAATCAAGGAAG
AGGTTGAGGAGATGCAAGACTTAATGACCAAGATCCCAATATTGATGAGA
ACAGCTGAGGATATGTGGTCAGGTCTTGAGGACCATGGTGATGGCACCAC
TGTTGATGAAGCTGGATATATATTAAAATCATCCTTACGTAAACAAGATA
TTATGTTTAAGTTGGCAGAAGAGTTAAGCTGGAATACAGAAGAAGCTAGT
TTATCACCGTTTGAAACATTACATTCCCTATACACCAAATGTATCGAATC
AAACAAACGACAATGTTTGGTTCTAACTTTCCACGACCGAAAGACTtgta
tttgtttatttgatggTCAAGGGAATCAAACTTTCCTAGATTTGAATATc
cattataaaaacaataaacaaaCAGCATTGGAAGCTCTTGGAGACGAAGA
ATGTGGAGGAGTTATTGGTGAATGTGGTCGAAGACATTCAGATTCAATGT
TGAATTATATTTTGACCAATATGTGTTTAGAGATGAATTGCACTGCTAGA
TCTGGCAATGCAGTCCATGTGCACCACAAACACCAAAACTTCGGCGAGCC
TTCTAAGCCAGCTGACTTTATTTGAATTCATAAGGCACATCAAGATACAA
GCAGAGGTCGAGGCTTTGTTGCTATATGCATGCACACTAATCCTTAGAAA
CCCTTGTATGTATTAGAcataagtaatttttttttacatttaaataaaat
tattttttgaactaGTTTCTTGGGCCGCCAGTTTATCCTTCGTGTAACTT
TTAGAACAGGAATATGGCTTCTGGAAAATTACACActttcattgtctgta
aaagCTAAAAACGTATAAAATCATTCCAGAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000443XLOC_000443Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000701-exon-sc0000005-1491911889:540415..540596TCONS_00000701-exon-sc0000005-1491911889:540415..540596Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:540415..540596TCONS_00000701-exon-sc0000005-1510915933:540415..540596Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:540415..540596TCONS_00000701-exon-sc0000005-1575043694:540415..540596Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:541707..542043TCONS_00000701-exon-sc0000005-1491911889:541707..542043Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:541707..542043TCONS_00000701-exon-sc0000005-1510915933:541707..542043Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:541707..542043TCONS_00000701-exon-sc0000005-1575043694:541707..542043Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:548280..548539TCONS_00000701-exon-sc0000005-1491911889:548280..548539Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:548280..548539TCONS_00000701-exon-sc0000005-1510915933:548280..548539Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:548280..548539TCONS_00000701-exon-sc0000005-1575043694:548280..548539Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:549018..549150TCONS_00000701-exon-sc0000005-1491911889:549018..549150Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:549018..549150TCONS_00000701-exon-sc0000005-1510915933:549018..549150Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:549018..549150TCONS_00000701-exon-sc0000005-1575043694:549018..549150Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:549562..549611TCONS_00000701-exon-sc0000005-1491911889:549562..549611Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:549562..549611TCONS_00000701-exon-sc0000005-1510915933:549562..549611Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:549562..549611TCONS_00000701-exon-sc0000005-1575043694:549562..549611Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:550554..550750TCONS_00000701-exon-sc0000005-1491911889:550554..550750Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:550554..550750TCONS_00000701-exon-sc0000005-1510915933:550554..550750Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:550554..550750TCONS_00000701-exon-sc0000005-1575043694:550554..550750Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:551220..551260TCONS_00000701-exon-sc0000005-1491911889:551220..551260Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:551220..551260TCONS_00000701-exon-sc0000005-1510915933:551220..551260Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:551220..551260TCONS_00000701-exon-sc0000005-1575043694:551220..551260Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1491911889:552529..554298TCONS_00000701-exon-sc0000005-1491911889:552529..554298Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1510915933:552529..554298TCONS_00000701-exon-sc0000005-1510915933:552529..554298Clytia hemisphaericaexon
TCONS_00000701-exon-sc0000005-1575043694:552529..554298TCONS_00000701-exon-sc0000005-1575043694:552529..554298Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:540415..554298 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.11698e-05	0.129164	3.15625e-05	9.88011e-05	9.9779e-05	4.92408e-05	0.000117548	3.68365e-05	4.05784e-06	2.22942e-05	0.000115189	2.05334e-05	6.49051	4.74949	0.368519	0.0699228	0.616523	1.18007	7.85004	7.91563	1.3129	0.262466	1.63053	0.467112	1.90333	2.25942	1.92507	1.48391	9.66942e-05	3.16871e-10
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000701 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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