TCONS_00000689 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000689
Unique NameTCONS_00000689
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2676

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000689 ID=TCONS_00000689|Name=TCONS_00000689|organism=Clytia hemisphaerica|type=transcript|length=2676bp
aatttttgatcttttttagCCTAATTGTATTAATAAAAAGAGTGCATTCT
GACGACAAGAAAATGGAAGCATTGGAACGACCTGAATCAATTCCAGTAAA
TTGCGATTGTGATAAAGCAATGTTATGTCGTTCAAGCAGATGTTATTCAA
CGCCACATACAACCTCATACAAAGATGGTAGCATCAGCTTAGAAgacatt
gaaaaagaattcacAAACTCTTTATTCAAAGTTGCTAAAACGTTACCGAA
ACAAAAATTCTGTTTGAAACTTGGTCGATATATTACGAACAAGAATGATc
cgattttaaataaaatatggTACTCAGGTCGCCtgaaaaaccgaaaattc
aaTTGCAAGAAAGTGAATGGCGAAATCAATGATATATCTAATGAGAATAC
AGATTCAATAGAGTTGATGACTAGTCTATATAACCAATTACCGTTACCGT
TTCAATGCCAAATTCTAACGACTACTACACTGCGATATTTTGCTAAACGA
AGAAAAGAACATATAAGTGAAACAATACGAGCTAACCAAGAAAACACTGT
GGAATTGAAGTCTTCGCGTAAACAGTTATTAAAGTACACACGGTTGCACC
ATGATGAGGAAATTTTCAAAGGTATTAAAGACGTTGAAAAGACACTATCG
GTGTACCGTACGCTACCCGTTGCTAACCAGTGCCAACGATTGATTCGAAA
ACAAAATGCATTTAGTAAAGTTATCCAGTTCCATGTTAAGCGTCAAACAA
ATCTTACAGATATTGATGTTGAAATTAAAATACGAAAACTCATTCCAAAT
ATTGTTGAAAATTATGTTCGGAAAAACGGTATCAAAATCGGGTTATCCCT
CATTAAAAGACATTGGGTTCGAACTCTTCGAACATTGATATTCGTTACAA
GTAAAGAAAGTAATTCGACAGAAGAACATTTTATCTTTGATACTAAACTG
TTTCTCGCGTTAGGAAACACAGGTCCAATAAATGCTAATGTTGCACTGGC
TGCACTTTATGACTTTACGAGTGAACAACTTTCGCAAAAAATGGGATTCC
AAATCGATTTTAAAACACGGATAGATGACGGAGCACACCAGGGGAAATTC
CCAACTGACGCTAATCATTTTCAAGAAGAGTTGTTCATGAGACAAACTTT
CCCGAGATATCTTGACCGATATTTCAAGGGTCTTCGTGCACCGGAACAAA
ACTTAATCCTGGATTTAGTATCTGTATactcaaatcaaacaaagactAAA
ATTATACACGTCTTACAGAAAGAGCATGGGTTGAAATTATCGAAATTCTT
AGATCGACCTCGTAACGAGAGACGTGTTATACATACCTTCCCAGCAACGT
CAACTAAAGGGCAActccaaaaaaacattaaaactcACAAACAATCAACA
ATAACAATCAGCCAATTAACAAACATTGAAATTATTATGATTGCAGCACT
CTCGTGCTCAGTCCTCTTCGGTTTCGTTTTTGTAGCcgtttttgctgttt
ttcaaaAGCGTCGAAAGGAATTCAATAGAAAATTATTGGAGATCCAGAGA
AATACACAAGTGACTTTATACAACACACAAAAACCAAATAATACAAACAG
TATACAATTCTTGGATGGTGAGAATAACACACATACTTCAGATGGAATTG
TAACATTGTCAGAAAGTGACAAAACTGTATCATTCTGCACGAGGACTAAA
TTTTATTCACAACAGAATCAACATAAACAACAAAGCATGGTTCGAGCTAG
TACTAATTTGACGGTATCGACAGATATAGAAACTTTATTATAAtcttaat
tattttatttttaactaGTACAAATCATTTGTGACTGTTTTAAGTCATCG
AGGCTACAAAACCTACTTAGAACCAAACTACTTATaccataggccatttc
acactcgaaatgaatcatgggcaATAAAGACTGGTTGTGCTCTAGTAACG
ACTTccggttggctagacgcaaaaatcttctaattatttcaaaacttttg
gaccaatagtaagtcatCATTAGCACGCAGTGGTCCttctcttaggtgcc
aaataaacgcgttaatttttaagaatattttcagttgttaaACAATAGTC
CTCttattttttctccaaaaagccTGACTTTAGCcaatatttaccttatt
tttgggttttcagaagtacaatttccaacccccccggcaattaggtcccc
ccgtttattaaaatttcgaaaattttccaacccccccccatttatttggc
acctaagagtaattacccattacgctttgcaactgtgaaatggcctattg
tCCCGGAAAATATAGTTCTCCCAAGACAATTTTATAGCTTATTGAATGGT
CTAATTGATATTGAGGAATTTTGAGGGATAAATTTTGATCCATTTTCCCC
TTACTCAAGATACTTGGAACTAAAAAGCCTTTGATCGATATAAAAAATCC
GAAAGTCAGATTCCATGGGATTCCATTTCTATTACGTGTGACTAGAAATG
GAAATATTATAACAATAGACACTATCATATTTTTTAACTTATAAATACCT
CATCTTCTTGTAACTACTTAGGACGATtttttgatattctattttaatCA
CACTGTATATATTGTAAAACACACAATGgagaaattaaattaaaaaatca
tataATAAATCAAGATTTAAAGCAAT
Run BLAST on NCBI

protein sequence of TCONS_00000689-protein

>TCONS_00000689-protein ID=TCONS_00000689-protein|Name=TCONS_00000689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=596bp
FLIFFSLIVLIKRVHSDDKKMEALERPESIPVNCDCDKAMLCRSSRCYST
PHTTSYKDGSISLEDIEKEFTNSLFKVAKTLPKQKFCLKLGRYITNKNDP
ILNKIWYSGRLKNRKFNCKKVNGEINDISNENTDSIELMTSLYNQLPLPF
QCQILTTTTLRYFAKRRKEHISETIRANQENTVELKSSRKQLLKYTRLHH
DEEIFKGIKDVEKTLSVYRTLPVANQCQRLIRKQNAFSKVIQFHVKRQTN
LTDIDVEIKIRKLIPNIVENYVRKNGIKIGLSLIKRHWVRTLRTLIFVTS
KESNSTEEHFIFDTKLFLALGNTGPINANVALAALYDFTSEQLSQKMGFQ
IDFKTRIDDGAHQGKFPTDANHFQEELFMRQTFPRYLDRYFKGLRAPEQN
LILDLVSVYSNQTKTKIIHVLQKEHGLKLSKFLDRPRNERRVIHTFPATS
TKGQLQKNIKTHKQSTITISQLTNIEIIMIAALSCSVLFGFVFVAVFAVF
QKRRKEFNRKLLEIQRNTQVTLYNTQKPNNTNSIQFLDGENNTHTSDGIV
TLSESDKTVSFCTRTKFYSQQNQHKQQSMVRASTNLTVSTDIETLL
Run BLAST on NCBI

transcript from alignment at sc0000005:103776..110715+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000689 ID=TCONS_00000689|Name=TCONS_00000689|organism=Clytia hemisphaerica|type=transcript|length=6940bp|location=Sequence derived from alignment at sc0000005:103776..110715+ (Clytia hemisphaerica)
aatttttgatcttttttagCCTAATTGTATTAATAAAAAGAGTGCATTCT GACGACAAGAAAATGGAAGCATTGGAACGACCTGAATCAATTCCAGTAAA TTGCGATTGTGATAAAGGTTATTCTATTATACATGAACATTTGAAATTAT gagaaagaaataaaataatgtATTGTAATTCTCTTGTGTTACATCTTGTA AGCCCAaagttaaaaacttaaaaatttcgAACATTGGGGATGACACAACA GCTTCAAAAAGGTTCAAAACGGTGCttaaaaaaaactataagaTTGACCG AGTAGTCGTTTTAGTATGGATATCACAAAACACTATATGCTATCAGGTCA CGTTTTAGCCTTTCCCTCATTAGCAGATAAAGAGGTTTTAGGAGAATTAC GCAAATATCCAACATTATACTGTATTTGTATACGAGAAAAGGATTATGAA GGATTATCATCATCTCTTTTGTAAAGTAAAGACGATACGATGTCGGAGAC GAGACATTagatttgtttgtttgtattAAACATCCCGTTATGTNGACGAT ACCATGTCGGAGACGAGACATTagatttgtttgtttgtattAAACATCCC GTTATATAtgtcgttttttttataagacaagtaaaatttctgaagccttc ggatgtttttaactttttgagttttaagcctaaaaatgttctcaacatgt tcttatttctgccattgggctcttccagaaaaaatccgttcatggggggg tggaggatgaattgtccaggggtattgaaaaaatactaaaaaattgcaat gtccagggggtaaattgcaatgtccaggggtaattttttgtgtccacggg gttgatttgatgtttgtccaggggtataacccgtgtNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacccg tgtccagggggttaaaaatcaaaatgtccaggggtaattttttgtgtcca cggggttgatttgatgtttgtccaggggtataacccgtgtccagggggtt aaaaatcaaaatgtccaggggtaattcatgaaaaaaataatatatcctcc accccctatgaacggattttttctggaagagcccattttttagtattttt gtccattttcgtGTGAGATTCGGTGTTATAGAGCttgcaaagctttaaaa tgttctaaacttgttcttaacattttggtcattgaagcctcatgttctta tatagtttcttcttatataaaaacatgCATGTCGTTTGTCTATTTTGCTG CATTTATAGCAGCTAATTAAGATGGAATTGATAAAGTGTCAAACCCGTCT TATGTCTAGACAAACTCTTTTATCATGTAATTCGAATACCTTGAGCGgac taaaatatttgttgaattTACGCTTAATTTTGAATATTACAAGGTCATAT TACATCTGACTATAAAAGATCAACAGCTATTCGGATTGTTGGgtaatttt tatataatttggggaaaagtctttctaagggtcccaaaaatgTCCATTTG TTACTCTCAAAGGGTAGATGTTTTAACTTCTTGCTCGGACATATAtgtca tctcgcaaacctatACCACCTGTGATCATCCCTGTCTCAGAATTTCAAAC AATAAACTTACTAAATTTGCCAATGTCATGCTAAACTTTAATTCCCAGCC TACTTGGTCAAGACGTTATTGATATGGATTTAGCTGAAACATGAGAAAAA AAGGAATCAAAAGATATGAAATCATTTAAAGGACTTTGAAGTACTCAAGA CGTAATTGGATCTACATTTATAGACATAACGGAACGCTTAAAGCATAATA ATCTCAAGAAAAACAATAAGAAAGCTTAAGTAAATCACCATTTATTGGCA AAATGATAAGACCGAAATTGCATTTTTTGAGTCGCAAAACAATAATCATT TGCATAAAAGACCCTGTAAACAATATCAAAAGTTTTTATGTGGTCACGTC GTTAGTTTTAAGTAGAGTCGAGCACTTAGCAATCAATAATCACCCGTAAA TTGCTATTGcgaaaagaatgaaaaagccaAACCAATTTTGATGGTGTTCT TTATACAGAAATCTTTGAATTCTAtatggcacacaacgttatttcaacgt taatctgatgttaaatggacgttgcGGACCCGTTAGATAAACGTAACGCT ATGTGCCAGCTGGCGGAAAGTATTCTCTTAATCTCGCATTGCGTACTAAA ATATGATGGGCTTTGGTCTTTGAATGTGGAAAGGCCTTGGTCAAAGTATT GACTTTCCAGGGATTTTTCTTTCTGGgaagaaaataataatatcaTTAAA GTTGATTGTGAATCCCTTgctaaaatgtttttctttaaaaagttttttac cacaaaggTAGAATTCACCAGAGCACCTAGGGTATGGTAATTAAACAACA AATGGACCGCCTTTTTATCCGATATTTATTCCGGACACCTTGGTTACGTA ACCATtcgaaataaaagaaaaactagtattcaaagaaattatataaaatt aaagaatttatttttttcctctttGCATTTAACTTTATCTACCATTTATT GATGCCTTGATTATGATTGCCATGGAAACAAAAACATTAATGGTGCATTA CAGTACCTTAATTATAGATTCATAATTTAATTGGAATAAGTTTTAATTGA TCTCTCTATTGTTTGATACTTAAATTGggttccttttttttcttccttac TTTACTTTACAGAGATGGTCCTCTCTATCTCCTTATACATCATTAGTGCC CACTATTTTTAGTTCAGGATTAAGCAATCAATTCTAGTGTAGAGTGGGAG GCAGTGGGAAGGCTGAAAATTATCTGTGTTTGATCTACAAAACCATACTG TGGTTCAAAAACCAATTTCTGAAGGGTTtaaaggttactgaaaatttGTA AATGGTCTCAAGAAAAGTTGAACTATGTCAaaaaaaagaccaaaacaaTT ATACTCTACTATGGACTGCCTCTAGGTTATTGACCCAACGTActaaaaaa cttgtaaattcaATTGAATTGAGGCTTTCAACAAAGTTTATACAACTCTC CGGACATGATCATATACCAATATCATTTAAATATAATTCACCATCAAATG GTAAAAACGTAATATCGCCATGCTTACTCTGAGtagaaatatacaaaaaa aaatattggttcACCTCCTTTATAAAAAACCAAAGTACTCGGAAACTCGT GGATGCGAAATAATTAAGATTGTCGTCAGCCTAAAAAGAGAATATCTTTC GTTCGAATAGGAAATTATTACAACAAACTTACCGAATCTTCATGTATGTa attgattttttccttatttggGCATCGTCGTTACCTGGTCTAGGAAAGGT TAAACTTCCTTAGAGTGTAAGGTTCCTGAAAACAATGCGTTATAATTact cattttttataagcagctccaattttcgggtcaggagTGGGGTTACTTAG CATTCTagttcattttctgaaaattttactttgaccacccctgatattat accatatttatgcttattagGCTAAGTGTTATCGTTTTCCATGCTTAGAC TAAAGATTTTACTTTGCGAGATAGTGAAAAACATTGGCTAGTTTCAGGGC TCCAGCCTTAGCAacttggttgcttataaaaaaaaatgtgtaccaaCTAA AATATCAATATTCTATTTTATTATCCGATGGTCTATTATTTACTAAGCTC ATTTTTATGGTTAAGATTTCAAGTTCCATTCTCTCATTCCATTTTGAAGC ATAAAAAGACATTTAGGAGAAATCTTCCCACTACTCTCTGTACTCCCGTC GTTAATGAAAACTAATTCAAATTACCCTTAATTAAGAGAGCATCAATTAT ACCATAATACCATAATATACAGTGTTTGCGACGAGGTCTAGTCAATATTC TATTTGGTAACTTAATTTAGGCATACCTTTTTACTAACAATTAACAAAAG TATACCAGTTCTTTACtaaagttgacgctctctaattccaCGTTCTACTA TTTGATGTTTCCATTAATTGATAATATTAAAAGTCACCATCAACGAAGAA GCTCTCATAAACACTCTACTATTCATgctatgcaccattgcaatgtcttc cacggacccaatagctgattggttgcaagtgtcatattgacttattttac gtcacttacaaccaatcagctgttgggtccgtgatgtaatgtccaAAGAC TCTACTGAGACTCTTCTCAAAAATCACCAAAGTTTATTGGAAAGTTTTTC ACAAAATTCGTTTGTTTgtctatttcatttttcaatgagttttcatcaaa ttataacattttctTTATTATCTCTCTTCAGCAATGTTATGTCGTTCAAG CAGATGTTATTCAACGCCACATACAACCTCATACAAAGATGGTAGCATCA GCTTAGAAgacattgaaaaagaattcacAAACTCTTTATTCAAAGTTGCT AAAACGTTACCGAAACAAAAATTCTGTTTGAAACTTGGTCGATATATTAC GAACAAGAATGATccgattttaaataaaatatggTACTCAGGTCGCCtga aaaaccgaaaattcaaTTGCAAGAAAGTGAATGGCGAAATCAATGATATA TCTAATGAGAATACAGATTCAATAGAGTTGATGACTAGTCTATATAACCA ATTACCGTTACCGTTTCAATGCCAAATTCTAACGACTACTACACTGCGAT ATTTTGCTAAACGAAGAAAAGAACATATAAGTGAAACAATACGAGCTAAC CAAGAAAACACTGTGGAATTGAAGTCTTCGCGTAAACAGTTATTAAAGTA CACACGGTTGCACCATGATGAGGAAATTTTCAAAGGTATTAAAGACGTTG AAAAGACACTATCGGTGTACCGTACGCTACCCGTTGCTAACCAGTGCCAA CGATTGATTCGAAAACAAAATGCATTTAGTAAAGTTATCCAGTTCCATGT TAAGCGTCAAACAAATCTTACAGATATTGATGTTGAAATTAAAATACGAA AACTCATTCCAAATATTGTTGAAAATTATGTTCGGAAAAACGGTATCAAA ATCGGGTTATCCCTCATTAAAAGACATTGGGTTCGAACTCTTCGAACATT GATATTCGTTACAAGTAAAGAAAGTAATTCGACAGAAGAACATTTTATCT TTGATACTAAACTGTTTCTCGCGTTAGGAAACACAGGTCCAATAAATGCT AATGTTGCACTGGCTGCACTTTATGACTTTACGAGTGAACAACTTTCGCA AAAAATGGGATTCCAAATCGATTTTAAAACACGGATAGATGACGGAGCAC ACCAGGGGAAATTCCCAACTGACGCTAATCATTTTCAAGAAGAGTTGTTC ATGAGACAAACTTTCCCGAGATATCTTGACCGATATTTCAAGGGTCTTCG TGCACCGGAACAAAACTTAATCCTGGATTTAGTATCTGTATactcaaatc aaacaaagactAAAATTATACACGTCTTACAGAAAGAGCATGGGTTGAAA TTATCGAAATTCTTAGATCGACCTCGTAACGAGAGACGTGTTATACATAC CTTCCCAGCAACGTCAACTAAAGGGCAActccaaaaaaacattaaaactc ACAAACAATCAACAATAACAATCAGCCAATTAACAAACATTGAAATTATT ATGATTGCAGCACTCTCGTGCTCAGTCCTCTTCGGTTTCGTTTTTGTAGC cgtttttgctgtttttcaaaAGCGTCGAAAGGAATTCAATAGAAAATTAT TGGAGATCCAGAGAAATACACAAGTGACTTTATACAACACACAAAAACCA AATAATACAAACAGTATACAATTCTTGGATGGTGAGAATAACACACATAC TTCAGATGGAATTGTAACATTGTCAGAAAGTGACAAAACTGTATCATTCT GCACGAGGACTAAATTTTATTCACAACAGAATCAACATAAACAACAAAGC ATGGTTCGAGCTAGTACTAATTTGACGGTATCGACAGATATAGAAACTTT ATTATAAtcttaattattttatttttaactaGTACAAATCATTTGTGACT GTTTTAAGTCATCGAGGCTACAAAACCTACTTAGAACCAAACTACTTATa ccataggccatttcacactcgaaatgaatcatgggcaATAAAGACTGGTT GTGCTCTAGTAACGACTTccggttggctagacgcaaaaatcttctaatta tttcaaaacttttggaccaatagtaagtcatCATTAGCACGCAGTGGTCC ttctcttaggtgccaaataaacgcgttaatttttaagaatattttcagtt gttaaACAATAGTCCTCttattttttctccaaaaagccTGACTTTAGCca atatttaccttatttttgggttttcagaagtacaatttccaacccccccg gcaattaggtccccccgtttattaaaatttcgaaaattttccaacccccc cccatttatttggcacctaagagtaattacccattacgctttgcaactgt gaaatggcctattgtCCCGGAAAATATAGTTCTCCCAAGACAATTTTATA GCTTATTGAATGGTCTAATTGATATTGAGGAATTTTGAGGGATAAATTTT GATCCATTTTCCCCTTACTCAAGATACTTGGAACTAAAAAGCCTTTGATC GATATAAAAAATCCGAAAGTCAGATTCCATGGGATTCCATTTCTATTACG TGTGACTAGAAATGGAAATATTATAACAATAGACACTATCATATTTTTTA ACTTATAAATACCTCATCTTCTTGTAACTACTTAGGACGATtttttgata ttctattttaatCACACTGTATATATTGTAAAACACACAATGgagaaatt aaattaaaaaatcatataATAAATCAAGATTTAAAGCAAT

Coding sequence (CDS) from alignment at sc0000005:103776..110715+

>TCONS_00000689 ID=TCONS_00000689|Name=TCONS_00000689|organism=Clytia hemisphaerica|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000005:103776..110715+ (Clytia hemisphaerica)
tttttgatcttttttagCCTAATTGTATTAATAAAAAGAGTGCATTCTGA
CGACAAGAAAATGGAAGCATTGGAACGACCTGAATCAATTCCAGTAAATT
GCGATTGTGATAAAGCAATGTTATGTCGTTCAAGCAGATGTTATTCAACG
CCACATACAACCTCATACAAAGATGGTAGCATCAGCTTAGAAgacattga
aaaagaattcacAAACTCTTTATTCAAAGTTGCTAAAACGTTACCGAAAC
AAAAATTCTGTTTGAAACTTGGTCGATATATTACGAACAAGAATGATccg
attttaaataaaatatggTACTCAGGTCGCCtgaaaaaccgaaaattcaa
TTGCAAGAAAGTGAATGGCGAAATCAATGATATATCTAATGAGAATACAG
ATTCAATAGAGTTGATGACTAGTCTATATAACCAATTACCGTTACCGTTT
CAATGCCAAATTCTAACGACTACTACACTGCGATATTTTGCTAAACGAAG
AAAAGAACATATAAGTGAAACAATACGAGCTAACCAAGAAAACACTGTGG
AATTGAAGTCTTCGCGTAAACAGTTATTAAAGTACACACGGTTGCACCAT
GATGAGGAAATTTTCAAAGGTATTAAAGACGTTGAAAAGACACTATCGGT
GTACCGTACGCTACCCGTTGCTAACCAGTGCCAACGATTGATTCGAAAAC
AAAATGCATTTAGTAAAGTTATCCAGTTCCATGTTAAGCGTCAAACAAAT
CTTACAGATATTGATGTTGAAATTAAAATACGAAAACTCATTCCAAATAT
TGTTGAAAATTATGTTCGGAAAAACGGTATCAAAATCGGGTTATCCCTCA
TTAAAAGACATTGGGTTCGAACTCTTCGAACATTGATATTCGTTACAAGT
AAAGAAAGTAATTCGACAGAAGAACATTTTATCTTTGATACTAAACTGTT
TCTCGCGTTAGGAAACACAGGTCCAATAAATGCTAATGTTGCACTGGCTG
CACTTTATGACTTTACGAGTGAACAACTTTCGCAAAAAATGGGATTCCAA
ATCGATTTTAAAACACGGATAGATGACGGAGCACACCAGGGGAAATTCCC
AACTGACGCTAATCATTTTCAAGAAGAGTTGTTCATGAGACAAACTTTCC
CGAGATATCTTGACCGATATTTCAAGGGTCTTCGTGCACCGGAACAAAAC
TTAATCCTGGATTTAGTATCTGTATactcaaatcaaacaaagactAAAAT
TATACACGTCTTACAGAAAGAGCATGGGTTGAAATTATCGAAATTCTTAG
ATCGACCTCGTAACGAGAGACGTGTTATACATACCTTCCCAGCAACGTCA
ACTAAAGGGCAActccaaaaaaacattaaaactcACAAACAATCAACAAT
AACAATCAGCCAATTAACAAACATTGAAATTATTATGATTGCAGCACTCT
CGTGCTCAGTCCTCTTCGGTTTCGTTTTTGTAGCcgtttttgctgttttt
caaaAGCGTCGAAAGGAATTCAATAGAAAATTATTGGAGATCCAGAGAAA
TACACAAGTGACTTTATACAACACACAAAAACCAAATAATACAAACAGTA
TACAATTCTTGGATGGTGAGAATAACACACATACTTCAGATGGAATTGTA
ACATTGTCAGAAAGTGACAAAACTGTATCATTCTGCACGAGGACTAAATT
TTATTCACAACAGAATCAACATAAACAACAAAGCATGGTTCGAGCTAGTA
CTAATTTGACGGTATCGACAGATATAGAAACTTTATTATAAtttttgatc
ttttttagCCTAATTGTATTAATAAAAAGAGTGCATTCTGACGACAAGAA
AATGGAAGCATTGGAACGACCTGAATCAATTCCAGTAAATTGCGATTGTG
ATAAAGCAATGTTATGTCGTTCAAGCAGATGTTATTCAACGCCACATACA
ACCTCATACAAAGATGGTAGCATCAGCTTAGAAgacattgaaaaagaatt
cacAAACTCTTTATTCAAAGTTGCTAAAACGTTACCGAAACAAAAATTCT
GTTTGAAACTTGGTCGATATATTACGAACAAGAATGATccgattttaaat
aaaatatggTACTCAGGTCGCCtgaaaaaccgaaaattcaaTTGCAAGAA
AGTGAATGGCGAAATCAATGATATATCTAATGAGAATACAGATTCAATAG
AGTTGATGACTAGTCTATATAACCAATTACCGTTACCGTTTCAATGCCAA
ATTCTAACGACTACTACACTGCGATATTTTGCTAAACGAAGAAAAGAACA
TATAAGTGAAACAATACGAGCTAACCAAGAAAACACTGTGGAATTGAAGT
CTTCGCGTAAACAGTTATTAAAGTACACACGGTTGCACCATGATGAGGAA
ATTTTCAAAGGTATTAAAGACGTTGAAAAGACACTATCGGTGTACCGTAC
GCTACCCGTTGCTAACCAGTGCCAACGATTGATTCGAAAACAAAATGCAT
TTAGTAAAGTTATCCAGTTCCATGTTAAGCGTCAAACAAATCTTACAGAT
ATTGATGTTGAAATTAAAATACGAAAACTCATTCCAAATATTGTTGAAAA
TTATGTTCGGAAAAACGGTATCAAAATCGGGTTATCCCTCATTAAAAGAC
ATTGGGTTCGAACTCTTCGAACATTGATATTCGTTACAAGTAAAGAAAGT
AATTCGACAGAAGAACATTTTATCTTTGATACTAAACTGTTTCTCGCGTT
AGGAAACACAGGTCCAATAAATGCTAATGTTGCACTGGCTGCACTTTATG
ACTTTACGAGTGAACAACTTTCGCAAAAAATGGGATTCCAAATCGATTTT
AAAACACGGATAGATGACGGAGCACACCAGGGGAAATTCCCAACTGACGC
TAATCATTTTCAAGAAGAGTTGTTCATGAGACAAACTTTCCCGAGATATC
TTGACCGATATTTCAAGGGTCTTCGTGCACCGGAACAAAACTTAATCCTG
GATTTAGTATCTGTATactcaaatcaaacaaagactAAAATTATACACGT
CTTACAGAAAGAGCATGGGTTGAAATTATCGAAATTCTTAGATCGACCTC
GTAACGAGAGACGTGTTATACATACCTTCCCAGCAACGTCAACTAAAGGG
CAActccaaaaaaacattaaaactcACAAACAATCAACAATAACAATCAG
CCAATTAACAAACATTGAAATTATTATGATTGCAGCACTCTCGTGCTCAG
TCCTCTTCGGTTTCGTTTTTGTAGCcgtttttgctgtttttcaaaAGCGT
CGAAAGGAATTCAATAGAAAATTATTGGAGATCCAGAGAAATACACAAGT
GACTTTATACAACACACAAAAACCAAATAATACAAACAGTATACAATTCT
TGGATGGTGAGAATAACACACATACTTCAGATGGAATTGTAACATTGTCA
GAAAGTGACAAAACTGTATCATTCTGCACGAGGACTAAATTTTATTCACA
ACAGAATCAACATAAACAACAAAGCATGGTTCGAGCTAGTACTAATTTGA
CGGTATCGACAGATATAGAAACTTTATTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000434XLOC_000434Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000689-proteinTCONS_00000689-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000689-exon-sc0000005-1491911889:103776..103892TCONS_00000689-exon-sc0000005-1491911889:103776..103892Clytia hemisphaericaexon
TCONS_00000689-exon-sc0000005-1510915933:103776..103892TCONS_00000689-exon-sc0000005-1510915933:103776..103892Clytia hemisphaericaexon
TCONS_00000689-exon-sc0000005-1575043694:103776..103892TCONS_00000689-exon-sc0000005-1575043694:103776..103892Clytia hemisphaericaexon
TCONS_00000689-exon-sc0000005-1491911889:108157..110715TCONS_00000689-exon-sc0000005-1491911889:108157..110715Clytia hemisphaericaexon
TCONS_00000689-exon-sc0000005-1510915933:108157..110715TCONS_00000689-exon-sc0000005-1510915933:108157..110715Clytia hemisphaericaexon
TCONS_00000689-exon-sc0000005-1575043694:108157..110715TCONS_00000689-exon-sc0000005-1575043694:108157..110715Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:103776..110715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0990719 0 0.319712 0.00238948 0 0.0373641 0 0 1.17521e-08 0.462362 0.00392703 0 0 0.435454 0 0 0 0.708511 0 0.32344 0 0.488314 0 0 1.2126 0 0 0 0.142349 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000689 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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