TCONS_00000675 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000675
Unique NameTCONS_00000675
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000675 ID=TCONS_00000675|Name=TCONS_00000675|organism=Clytia hemisphaerica|type=transcript|length=135bp
TTTAACTGATATGACCAGAGATCGAGGATATCAGGTTTTCCTCAGGATTT
ATAATAAAACAGATGACAATGCGATCGTTCTGCAGCTTGCAGAAACTGAG
CAAAGTAACCAGAATAATCTCCAAAGTTCTCACGA
Run BLAST on NCBI

transcript from alignment at sc0000002:1603450..1603584

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000675 ID=TCONS_00000675|Name=TCONS_00000675|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at sc0000002:1603450..1603584 (Clytia hemisphaerica)
TCGTGAGAACTTTGGAGATTATTCTGGTTACTTTGCTCAGTTTCTGCAAG
CTGCAGAACGATCGCATTGTCATCTGTTTTATTATAAATCCTGAGGAAAA
CCTGATATCCTCGATCTCTGGTCATATCAGTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000421XLOC_000421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000675-exon-sc0000002-1491911889:1603450..1603584TCONS_00000675-exon-sc0000002-1491911889:1603450..1603584Clytia hemisphaericaexon
TCONS_00000675-exon-sc0000002-1510915933:1603450..1603584TCONS_00000675-exon-sc0000002-1510915933:1603450..1603584Clytia hemisphaericaexon
TCONS_00000675-exon-sc0000002-1575043694:1603450..1603584TCONS_00000675-exon-sc0000002-1575043694:1603450..1603584Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1603450..1603584 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000675 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top