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TCONS_00000599 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000599
Unique NameTCONS_00000599
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000599 ID=TCONS_00000599|Name=TCONS_00000599|organism=Clytia hemisphaerica|type=transcript|length=145bp
CTACCCATCTCCAAAAACCTGGTGACTCATTTCAGAGTGGAATGTTGTTT
CCTCATTAACTGCATCTTCTTCATTGTggactaaaTTAATATTGAGTGCC
TCATTTGAGTCAATCTTATATTTCTCAAGTGTTGAATCAATTGGA
Run BLAST on NCBI

transcript from alignment at sc0000002:1388223..1388767-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000599 ID=TCONS_00000599|Name=TCONS_00000599|organism=Clytia hemisphaerica|type=transcript|length=545bp|location=Sequence derived from alignment at sc0000002:1388223..1388767- (Clytia hemisphaerica)
CTACCCATCTCCAAAAACCTGGTGACTCATTTCAGAGTGGAATGTTGTTT CCTCATTAACTGCATCTTCTTCATTGTGGACTAAAATTTATTTTAATAAA ATAATCAATGAACTTTTCCATAAAAAAACCTTTTCAGGGTTAAGTTTGAA AATATGGGGGAGTTTCATAGGGGTATACAAAAGTAGAGATTAGACAAATT AGAGATGATGGATGGAATAATGGCCAAATTCAAGCTTTCTTATACTTCTT ACTGTAATCTTGCTGGCTTTGCCATTTGAAGAATTCAGACATGTGGTCAA TCACACTCCTAAAATCTGAATTTTGATGATTTAGACGTGTGATAATGCGT GCTAGCCACCACTTTTAATAATAAAAACTAAAAATCGCGCTCCTCAGAGA TTTTAGGCGTGTGTGGAGGCGTGCGCATGTATCACACGTCTCAAATGATT CAGCCTGACTGACTGATTATTACAACCTACCTAACTTAATATTGAGTGCC TCATTTGAGTCAATCTTATATTTCTCAAGTGTTGAATCAATTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000353XLOC_000353Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000599-exon-sc0000002-1575043694:1388683..1388767TCONS_00000599-exon-sc0000002-1575043694:1388683..1388767Clytia hemisphaericaexon
TCONS_00000599-exon-sc0000002-1575043694:1388223..1388282TCONS_00000599-exon-sc0000002-1575043694:1388223..1388282Clytia hemisphaericaexon
TCONS_00000599-exon-sc0000002-1510915933:1388683..1388767TCONS_00000599-exon-sc0000002-1510915933:1388683..1388767Clytia hemisphaericaexon
TCONS_00000599-exon-sc0000002-1510915933:1388223..1388282TCONS_00000599-exon-sc0000002-1510915933:1388223..1388282Clytia hemisphaericaexon
TCONS_00000599-exon-sc0000002-1491911889:1388683..1388767TCONS_00000599-exon-sc0000002-1491911889:1388683..1388767Clytia hemisphaericaexon
TCONS_00000599-exon-sc0000002-1491911889:1388223..1388282TCONS_00000599-exon-sc0000002-1491911889:1388223..1388282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1388223..1388767 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000599 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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