TCONS_00000596 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000596
Unique NameTCONS_00000596
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1407

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000596 ID=TCONS_00000596|Name=TCONS_00000596|organism=Clytia hemisphaerica|type=transcript|length=1407bp
TCTGCTTCTTCACTATACCGTAACAGGCAGATAAGCCGATATTTGGCGAG
GTTGGAAAGTTGAAAATCTTCAAGTGAAAACCAGatgcatttttttcttt
aggAGGTGCTGTATTTCTGTTGAAATTATCGATAATTAGTAATACTACAC
AATAAGAAGATGGAGGCTATTAAAGATACATttacaaaatccaaaaagaa
aaaggtgAAAGCCGTTCACCAAAAGGTTAAAGTTTTTAGAGTCCATGATC
CAAAGATGGCTGTTTTAATGTGGGGTGTGACACATTCGGTGTCGCAATTG
TCTCATGTCCCACAACAAGTTATGTTGCTCAAAGACGACTTCAAAGCATA
CAGCAAAATCAAGATAGATAACCATTTTTATAACAAAGAACACATGCCTG
GTcacttcaaattcaaagaatATATGCCGTTAGTTTTCCGGAACCTAAGG
GAACGATTTGCAATCGATGAAAAGTTATATGCAGCTTCATTTTTAATCCA
ACCGCAACTCAGTAAAGCACAAGGGAATAGCGGTGCAAAATTTCTACTGA
CCACCGACAAGAGATTCTATATCAAAACATTGCAGAGCGTTGAAGTGGAA
ATGATGCATCATATAATGCCTAGTTACCACAGatataTCGTCGAATCACA
CTCGGACACACTGTTACCACAATACCTTGGTATGTATCGGACGACGTTGG
ACAACAAAGAATATTACTACCTCGTTGTACGAAGTGTTTTCAGCTGCAAG
AAGAAAGTACAAAAGAAATACGATTTGAAGGGCTCGCGAATCGATCGAGA
AGCCAAAGACTCTGAGAAGGATAAGGAAAGTGTCACTTTCAAAGATAATG
ACTTCACCAAAGAAAATGCCAGGATATTCATTGGTgctgaacaaaaagaa
aaattcaaagataGGCTAACTAAAGACGTCAACttTCTGTCTGGTCTGAA
CATAATGGATTACAGTTTATTGGTTGGTATTCACGACACCGAACACGTCG
ACTCTTCCGAACCGGAAGACGAACAAGACGGTGAAGGACCTGACGGTGGC
ACTACCGGTGACGAATCTGGCGACGGCCTCGAAGAGCCGGCATCTCCTAC
TACTGACGGAGAAACATCTGCCGCTACCCCTGAGACGCTTGCAGCACGTC
GCCAACGTTACTCGCGAACGGAAAGTGTATCCAGTAGCGATGGTTACGAA
TCGGAGTACTTTGCGCTCCCGTCCTCTGACGaatCACTTCATTCCGTATA
TTACATGGGTATCATCGACGTCTTAACGTATTACGGCGCCACCAAAAAAG
CGGCACACGCGGCAAAGACAGTGAAACACGGGGTGTTAAACATAAAACGG
CGTTCGACAAGCGAACCCAATATGCCCAACATGAAACTCAGCATGGAGTT
TAATAAG
Run BLAST on NCBI

transcript from alignment at sc0000002:1322434..1335950-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000596 ID=TCONS_00000596|Name=TCONS_00000596|organism=Clytia hemisphaerica|type=transcript|length=13517bp|location=Sequence derived from alignment at sc0000002:1322434..1335950- (Clytia hemisphaerica)
TCTGCTTCTTCACTATACCGTAACAGGCAGATAAGCCGATATTTGGCGAG
GTTGGAAAGTTGAAAATCTTCAAGTGAAAACCAGATGCATTTTTTTCTTT
AGGAGGTGCTGTATTTCTGTTGAAATTATCGATAATTAGTAATACTACAC
AATAAGAAGATGGAGGCTATTAAAGATACATTTACAAAATCCAAAAAGAA
AAAGGTGAAAGCCGTTCACCAAAAGGTTAAAGTTTTTAGAGTCCATGATC
CAAAGATGGCTGTTTTAATGTGGGGTGTGACACATTCGGTGAGATTTTCT
TTTATTACCAGAAACTTTAGAGGAGAACTACAAATACAAATATAAAACCG
TCACAACTGAACTTGNTTTTATTACCGGAAACTTTAGAGGAGAACTACAA
ATACAAATATAAAACCGTCACAACTGAACTTGAGACATTTAAAGAATTTA
GCTAGCCAAAGCTAGCTGCCAAGCTCAGTTTTTCAAATCCTATTGGTTCA
GGACCCGCCCTGCCGACGCACCGGACTGTCTCGGTATTTGTCCGGTGGTA
AAAAGTATCCTTTCGCTACACCGGAGGCAATAAGTCCGGTGTCAGTCCGG
TGTTGCATACAGGTAATTTTGGACGCCGGACATTTATGAAACAAAAAATT
AAGAAACACCGGACGCACAGGACTGGTGTTTTGATTGTCCGGTGGAAACA
AATATCCTTCTCCGACACCTGACATCCGACTTCTTTAAGTCCGGTGTAGA
GATTGTCCGGTGGTAAAAAAATTTCTCATTTTACACCGGACTTTCGCGTG
TCCGGTGTTCCTTAGGTCCGGTGCATCGGCAGGGTCCTATTGGTCCTTGT
CTTTTTATTTCAACTCACAAAAATTTTAGGGACCTGTCAAATACTGTAAG
TTCATAGTCATAGTGGACATCCCAGCCTCATCTTATTCTGACACCCTTCT
TTACTTTTATAAGAGTTGGAAATAAAAGGAGGTCAGATCATATAGATTGA
TTTGGTGTTTGCTTTAATAGCGTGGTTAGAGAGGAAAAAATTCAGTCAGT
CACACTAGCGTCCCGCCAAAATGCGTAGCAAAGATTAATGATGATGCGAA
AGTGCTATAATCTTTAACTTGACTTGCAAGCAAAATAATGTGCCGTAAAA
CTTCTAAAGGGATTCATGAAAAAATAACCTGGCGCTTTTTAATGAAATTA
ACATTTACAAAAACAATGAGAAATTGCCAATTGCCATTTGAGCCATAGAT
GAAAAAATTTGAGCCAAGCCAACCTTAAAAACTAGTTTGAAGATCAACTT
CCCAAGAAAAAGATCTATGGGGGAGAGAAAACCCACCTAGATCCGCGCAC
CGCAGAATAAGCTATTTCCTGGAAATTTTGCCAGACCTCAAACAATGGCC
CATTTACATGTGCAGAATTATTTTTGCTTTAACGATAATCAAGGCCTAAC
AAATTGAAGCGCTGTCTCAGGAATTGAATTACAAAATTTGGTTGGCTGAT
TGGCTGCTGCACGTTTAGTAATCGGTCATTTTGTTCATAGTGTCCTCCCC
CCCCCCTTTATAAAGGGGGGGGAAACCAATTTTCCAATTTTGAATGGGTG
AGGGGGGAAAATGAAAATTTGAATAGTAAAGGGGGGGAAAAAAAGAGGGG
GGAAAACATCGATAGTTGGCAAATTTGGTGGGGGGAAGTATGAAATCACT
TCAACTTTATCTCAGCAACCAAGGTAAGTCCACATGATATCATGTGATTA
GATCATGATTGAAAAATTAACCAAATTTTGTTCTATTTTGTCCAGTTTTG
TCTAGTATTCCTTTTGCAGCAAAATTTTACGTTTGTGTCAGGTTGATATT
TGAGAAATTTATACGGGTATATGGGGGCAACTGATATTTTCAGAATTTTC
TGGGGGGAAAGCAAAAAAGAGGGGGGAAACTAAAAAACCAAAAAGTCATA
GGGGGAAAAAAAAGAGGGGGGAGATTTAAAAAATTCAAGAATTTGGTGGG
GGAACAAACCCTGGAGGACACTATGATTTGTTTCATTTGAACAAGTCTTA
ATTAATTGTCTTGGGATCTTGAACTTGATTCAGGTAACTCTCATCATTGT
TGTTGCAAATACATCCTGTAAATGACTGATGTGGTTTTTTCTAAAAGCTT
GAAAAAATTTGGGGTATTTACGGGACACTTTTACAATAATTTTTAGGAAC
ATCTACTAAATTTCATGGAAAAGTAATAAATGTTGTATAAAGGTCATACT
TTGACAAATAAAATATCAAAATATCAGATCTCTAGGATCAATACTTTCAG
AGTAATGCTCAAACAAGTCAAAATTGTTCCGTAATTACCCCAGATGACTA
TATTCCTATCCCTTTGATAAAAGATTTTTCTAGTCACATACAGTCACCTT
TAAAATAACACTATCACACACTGTCGTAATCTTAGTATACTAAGACATAA
AAGCATCATTATAACATATTTTAACATTCAATAATTCATGTATATAACCT
TGCAGGGTAACAATGAGAAATGCCCCTAAATTTGTATAGGGATTGCAGCG
TAAAGAACGAGTCTACCAGAACAAGCTACTATCTGCTCTTGATCTACCTG
TTGATTGAAATATTTCTATCCCAAATATCTTAGACTGCAGTAAAATCAGG
ACCTGTACAATTGATTGGAGGTAATATACTAAGACAGGTTAAAAAAATTT
CCTCCAACAGAGTCTTCTTCGCTGATCAAATCATCATGCTCTTTNAAGGT
TATAAAAATTTACTCCAACAGAGTCTTCTTCGCTGATCAAATCATCATGC
TCTTTTAGCATTCTAAGACATCAATCTCTTTTCAGCATACTATGACATCT
TATCTTAGTATACTGCAACCTAATACAAGTCAAATATTTCTTAGTATATT
AAGAGGTTGCAGTACACTCTGTGGTCTTAGTATGCTACAGTTAAACTTGA
CTGCATACTATGTTGAATAAAACTCCAGCATCAAAAAAATGATAAATAAA
AAATTAATATACACACTTATAATTACTATACATTAATGTGTTATTGTTTT
AATGCTAGAGTTTTTGATTATTCAACACAACATTCTGACTAGCAAAAGGT
CTAATAAACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGCTTAGCTAGAT
AGCTTTAATAAGTGGGTTAACAGATGTAAGAGATGTACTGAAACAGAGTA
GACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAATTAGGGATGTGGACATTAGACCAACTTATG
GTACAAATCATGACATAATATTCTCTGAATGTTCAAAGTTCAGTACAAGG
TGTTGCAGAGAACTGAGGACTGAGAACTGTTTCAAAGGTTTCAGCTTTTT
CATGTGCATGCACATGCGCATGCATGGGCAAACAGGGGAAGTTTTTTAGG
GTATAATATCACTTACTTTCTATGATAAATTTTAAGTAAGATCCTAGGAT
TTAAAAATTCTTAAAAGCGATATGAAACAAACATGGTATTTTTTTAAAAA
TGATAGACTACAGTAGTAAAGGTTGCAATTTCATGTGTACTTTCCATTCA
GATCAATCTTGATAAACGGGTGATTAAACATACCTTTAAAAAATTCTACG
ATTTTGAAAGCCTTTATTACGTTTTAAAAAACTCAGAAATCCAGTTTTCA
CTAAGAGGATTTTTCAGACTGACATCTATCACTGTCTTGAAGCTGATATA
ATATCTAGCTTTGAGCTACTCTTATCACCTTTCCAATATCGTGTATATAA
TTACATTCACTCTTGATAAATGGGATATATTGCATGAAATTGTTACTGCA
CTTTTATATCACATAAGTTAAGCTTGTATTATGAAGATTTCCCAGACTGG
CAACAATCTTAAGCTTGACATCCATATGAAAATGAAGATTTCTATCTACT
CCACCTAAAATTTATATTTTCGGAAACTTTGAACCTGGCTGATTTCAAAT
CATTGCATGAAACTAAGAGAGATATTGTCAATTTTTTTTGGAAATACAGT
CTATTCAGAATTTTGTCAATTTTCAATGTTCAAAGCCAAATTTTGGTCTA
AAAATAATGGAACCAAAAATTTGAAGAAAGAAAGCCATATGTGAAAATAT
TTTTTGAAGTTATGCTGAACTTTGCCTTGATCAGGTAACAATATTACTTT
CATGTAACATCATGTTGCCTTTTTTCCAACTTGATTTTGTAGGTACAAAT
TCTTTTTTCCTTTATTAAAAATGAAAGAAATTAAAACTGATTAAAAATAA
AAATGCCATTTTTTTAGCGGCTGGTCATTTAGGAGCAGAGGGAGGGGGTT
CATACTAAATCTCAGTCGTCATGTTGTTTAGTCTGGGGAGGCACTCAAGG
TAAGTGACCTACCGTTGTGCAACCAGTGCGTTTTCAGGCCTCCAAGTGCA
CTGTAAGGGTCGAAATGAGTAAAGATGAGAGATGCGCTTTATAAAGGGTT
AATAAATAGCCTTGGCAAAGTTTTTTGGGCAAAATTTCAGATATGATCTA
ACATTTTTTGCCTAAAAAAAATGGACAAAAATTTTCCAGAAAATGCACTG
TAGTAAGGGTCGTTTTTTGCCTAGATTTACTCAAATTTGGCTAAATTTTC
TGTGCTGTAAGGGTCCGATTTACGGCCAAATCTTGGGTTGCACACAGTTC
ACTTTTTGATGTCTATTTAAAGATGTACAAAAAATCAAGATTATATCCTA
TGTTCTCAGAAAATGTACATATTTTTTCAGGTGTCGCAATTGTCTCATGT
CCCACAACAAGTTATGTTGCTCAAAGACGACTTCAAAGCATACAGCAAAA
TCAAGATAGATAACCATTTTTATAACAAGTAAGTTCGAATTTGTAAGTTT
TTATATTCATACGAATACCTGCCCTTTTAATTATTGTAGACTTTCTGAAA
CTTAAAGGTTTTATTTTTAAATAAGAGTGATATCGTTTGCTTACTCTTCA
ATTTTAATTTACAAGCTTTTTGATATTGAATTGACACGGATTTTGAGCAA
GATTGGTCAGAAAGAGGAAAAGAAAAACATTTTTTTGCTCATATCAGAAT
AATAGGCAGACTCTGACCTGGTATGAAACATGTGCCTGATATGAAACGGG
AATGCTTATGTAAAAATAAAACCTTTGAATCAAATCGCAATTTAGGAATT
TGCTATAATAGCCTGTACCAGAACATTTTCAAATTTGTGACAGAATAGCT
TGGCACTGTTTTAGATCAGCGTGTGGTGCTTTTTATCCAACCTTCTAGCG
AATGGTCCGTGGTTTGACTCGCGTTCTTTTCTTTTGTGTTGAAATAAAAG
CTCAATCGATTTAGTCGTCACAAGACCTGAATTTCCAGATCTTAAGTCAT
AATTGCTTTCTCGGCGTTATTATTGTTAATGATTATGAATTTTTCTTATT
CTAATTTCTTTCAAATAATTGATGTGGTTATAACTAGCTCATTAAAAAAG
TGATATAGTCATTTTAAACTTATGATTCATTGAGAATGATCAAGCCTAGT
TTTATGGAAACTCAGTCACAGATTCATTTTGTTAATCTAAAACTATTTTC
TTCATGAATGTGTCACAAGGCTGGCCGTTCAGAGTATGCCTTCTCTTGTT
TCTGACTCAATGTTTTGATAATTGAGGTTCATACTTTTGACGAAAAATGT
AAAAGTATTTCCCTAACCTTTCTGCTTTCCCTTGGTCGCTTTTTTACTAA
CGGAACACGTTTTTGTGTTTTCATAACGTTAACACTATCTTTTATCTCGA
CTGAAATGTTTGCTTTCTAAATTCTTAGAAATGAGGTTGTTTTTTGAAAA
AATATGTTTGTCAGAAAGGGATTTTCCAGTTGTACAGTTTTGTTTTTTTC
CACGAGGAAAATGATAAAAAAACCTATCGAAATTGTGACAGGATTAGAAA
TTGAATTTGAAAGATATGAAAAATGAGTGAAAAGTAACGAATATCAATAA
TGAATTGGATATGACATATTATTTCCCACCAATAGAATCGGCCCAAAATT
TGAATAGCAAGTCAATGAGATTTGCTTATTTCGAGAAGAAGTATTTAAAT
TATTTATCAACATTAAGGCAAATTCTCTATATACATTTTATTTTAAGGTT
CAATATCGATTTCTGTTATGATAAAGGTTTAAAGCATTTGAAGAAAAACA
TCAGAATTGAAAACCCCAAAACGCTTAAGTCGACGAAACGAACTTCACAT
CAATATTATTGTGATAAAGATTAAGAATCATTATTAGCAAAAGCCTTGTA
CAATCTTTTATAAGAAAAAATCGATTCTTTGTGATTTGGCTGTCAAAATT
AAGGTACTCTCATCCAAATCTTACTACTTGACCCAAAAATGCTTGAATTT
CAGCAATTGCAGTATCAGCATTCTTCTTAAAAAATTATTTTTTAGTCTTA
GTTATTCTTTTGAAGATTTTGAGCCTCACTCTTTCTTAAAAATATGAAAT
TGTTCTGATAAAAAAATGTTAATTATTTTAATAAGTTTTCACAAGTAAAA
ATTCCAGACAGGTTATAAAAATTGACCTGTCAAATAATGTCTATTACAAT
GTCGTGTATGAAAACATAATCCTATTATTCGAAATAACATGTCTGTCATC
TTATACGCCTTGCATCTGAACTCTCCCTTGTATTACTGTCTGAAAACAAG
AACTATCATAAAATATTTTTTAAACATCCCTTTTCTTAGCTCCAAGCAAC
TCTTTTCAAGTTTTTCCGTTTTTCGTGAAAGAAAATTGTTTCTTTGGTCC
ATCACCGCCATCACCAAAGAAGCTAGGACAAATAAGATAATCTCAGTCTC
AGCTTTCAGAATTTACCAAGAAAATGCTTTTTTTAGCCCCTTTGAGGCTA
ATAAGTACATTTTCTGATCATTTAATTTTTTAGATTGCGGGGCTTAGCCA
AAGCTTTGCTCCTATTGTCTTTTAGGACTTGCGATGGACTGTAATTTTTT
GCCATGAATTAGCGTGGAGCAAAATATTGTATTGTCCATTATCGGAAATC
TCTACTCTTACCCCACATTCGTAAACCTTTTTGAAATCTCAAAGAAGAAT
ATACTCTTATAAAACAATTAGAGTATTAATGATTAAAATTATACTTGTTT
CAATTTCCCTCTACTGTTTTTAATGTGTTTTCTTTGTAGAGAACACATGC
CTGGTCACTTCAAATTCAAAGAATATATGCCGTTAGTTTTCCGGAACCTA
AGGGAACGATTTGCAATCGATGAAAAGTTATATGCAGTAAGTACAACATA
ATATACTCCTCATGACATCGTGATTTTAGGGCTGCTCGGTTTTCTGCTAT
AGAAAATCCCAATCCTGATTTAAATATTCTTTGGAAAGGAGGTTTTTTTT
TTGTTTTCAAGCACCTTTCTTACTTGCTTTCCCAAACTGAATAAAAGCCT
CTTCACTTTTAAAAACTATTTTCTTGTTTAGTTAATATTGATGTTTATGA
AATTTCAATATTTTCTTCCTTTTTAATAGGCTTCATTTTTAATCCAACCG
CAACTCAGTAAAGCACAAGGGAATAGCGGTGCAAAATTTCTACTGACCAC
CGACAAGAGATTCTATATCAAAACATTGCAGAGCGTTGAAGTGGAAATGA
TGCATCATATAATGCCTAGTTACCACAGAGTAAGTTTGTTTGTTTGCAAA
GATTTTGTTTGAAAATCCTCCTTCGTCGTCACAGCAGCATTTGCTTTTCC
TTTCGTCAAGTGTCCCATCGTATCTCTACTAAGCCTAGATTACACTTTGA
TTTGCTAAAGCTTACTTCACACTAACTGTGCAGCAAATATAGTTTTAAAA
ACCCTCCGAGTACCTTCTTTTGGGCCCCACCCCATTCAGACCATCTGTAT
CTTGTATTATTGAATTGATCGTTTTTAATCTCTGGGAGCTAACAAACAAC
TCCCATTGGTTAAGTTGATTTTTGTAAAACAAGGCGGCATTTTTATTTTA
ATCTCCACAACAATTAGTGTTCGAAAGTATTTCCACCTACCTAGACTATT
CCAGACCCTCTTCTATTATGTACGCTAAATATAAACCTTCCACCGTTCAC
AAACCAATGGTGAGTTTATGTATGAGTGTTTTTCTGGATTTGTTAGATCC
TGACTGACTGAGGACGACGGTAAATAGGCACTTTTACAAATCGTTTCAGT
CGCTCCGCCGTCCTCAAAATTGCAAATACATCAACTCGCTAATAACTGGG
GAGGGGGCGATAGGAATAAGAATGGCTGGACAAGATGTTGGGTGAAGTGT
TTATTAGACTAAAGTGTCTCCAGATATAATTGGCAGTGGAAACAAGAATG
CCTGTAACTTTTGATAGTTTTTATTAAAAATAGCGCTTTTGATTCTCTAA
AACAAGCAAAAGAATTTCCGCAATTATGTTTGACTATCAAAAGTATTCTT
GTTTCCACCGCCAATTATCTGGATAGACTTTAGAGACCGTTCTTCAAGGC
GTTTTAATTATTGTTTTTCATTTTTAGTATATCGTCGAATCACACTCGGA
CACACTGTTACCACAATACCTTGGTATGTATCGGACGACGTTGGACAACA
AAGAATATTACTACCTCGTTGTACGAAGTGTTTTCAGCTGCAAGAAGAAA
GTACAAAAGAAATACGATTTGAAGGTACGAAGATACAGCTGAGTCACTGT
TTTTCCTTATTATAGAGAAATTTTTGTTCTTTGCCCTTCTTTATTTAAAG
ATATTAAGATTAGCCCGCTGATGGGAGAAGAATCTCTCGAAACGTATCCG
AACGTAAAATCTCTTTCGTGGGGCAAACCACGGTGGACTTTCAATCTGAT
TTTTTAATTACTTATCTTTTCTTCATCACAGGGCTCGCGAATCGATCGAG
AAGCCAAAGACTCTGAGAAGGTTTGTAGTTAGAATATAGCTTGCTTCTTG
AACTCGCCTTAATATTTTTGTGTTGGCTGGTTTGGGCTACTTGAAACATT
GGGTTCACTCGGAAAACTTTTTTGCAAACCTTTTTTAACTTGGCTGAATT
CTGCCTCGCAACACTTTCGTACGGTCTTGAGTTCATTTCACAGGTTTTCA
ATGCTTATACGGACCAATTTTCACCCTCCGGAGTAAAGGCAAGCTTAAAC
AGAAAAAGTAATTTAATCAACTTGAATTAGATTATTTTCTGAAGCTGTCT
GAGGTAACAATATATTTTTAGGATAAGGAAAGTGTCACTTTCAAAGATAA
TGACTTCACCAAAGAAAATGCCAGGATATTCATTGGTGCTGAACAAAAAG
AAAAATTCAAAGATAGGCTAACTAAAGACGTCAACGTAAGTGTATTTACT
ATGAAAGTGTATGGGCCGAGGCTGTGAGGTGTACATAATGTAAAATGACA
TTTGCATAGCATTACGACCAGACTCGCTGCTATTCAATCAGCCATCCTCA
GTTGATAACCCAGTAATGTAGGACTTTTAGACGATTGAGAGTATTTGTTT
TCATGGGGTCCATGACCATGAACATGAACATGAACATGAACATGAACATG
AACATGAACATGAACATGCGAAGAAGTGGGGTTCAGGGATTAAGGGGGTT
GTGGCATTGAGACGTCTAGATCATTCCATCACCGCTCCTAAAAAACGAAT
TTTATTTTGCTTCAGTTTCTGTCTGGTCTGAACATAATGGATTACAGTTT
ATTGGTTGGTATTCACGACACCGAACACGTCGACTCTTCCGAACCGGAAG
ACGAACAAGACGGTGAAGGACCTGACGGTGGCACTACCGGTGACGAATCT
GGCGACGGCCTCGAAGAGCCGGCATCTCCTACTACTGACGGAGAAACATC
TGCCGCTACCCCTGAGACGCTTGCAGCACGTCGCCAACGTTACTCGCGAA
CGGAAAGTGTATCCAGTAGCGATGGTTACGAATCGGAGTACTTTGCGCTC
CCGTCCTCTGACGGTTTGTATTTTCTTCAACCTAAGAAGTGTATAGGCTC
AGAAAACATCACTCACTCTTTATGGTATCCTTTACTACAGTACCTGAAAA
TGTTAATTTCAAATTTTTTCTTTTAAAGAATCACTTCATTCCGTATATTA
CATGGGTATCATCGACGTCTTAACGTATTACGGCGCCACCAAAAAAGCGG
CACACGCGGCAAAGACAGTGAAACACGGGGTATGTTTTTTTACGTGCTGT
TATTTTAATTAGTGATTTTTTTTTTGGTTTGAGGGATTTTATGCACTTGA
AAATCTCTGTAAAACCTTTATGTTTGTATTGCAGACGTTGGGCTTACATT
ATTAAAGCTATAATTTTTAGTTTGTTAAAATTTGATTGTTTGATGCTTGG
TTGTGGAAGCTCAAGTTGATTTCTTCGAAGCTGATCAAACTCGTTTTTTA
GATGTCCGAAAAGGAAAATTTCTAACAAAAATAATGACAAATTCGCCTAG
GGTGAGTCATTAGGATTAGAAGTTAAGGATCGGCTTATTTCAAAGTAAAA
GTCGTTACCTTTCCAACTGTTTCGCTTTACTGTTGGAAACCGCTAACGTT
TTGTATAGATTTGAAAATCGATATTTGAGGTTTTAAAGTAACAAGATGTT
TGAATAATTCATTATGCGAGATGAGAGAATTTCAAAAGATTCTTTTCATG
CATTCTTGTTGTGGGTGTTACTAAGGAAAATATTATGCAAGGTTCACTTT
CAAAACGTATTCAATTTCAAAAGAGGGTGGTAACGAATTATTTTCTCAAA
GAATTTTCGTTAGGTCATCATTAAAGTAAAATGGTAAAATAATTGTGAAA
GTGGGCTGGTTTCTATTTGTTAATTTTATTCGTTTATCTGTTGGGTAAAT
GAACATTCAACTTGTTGTACATCAATTTTCGATATTGCATAGTTTCTAGA
GGGGTCAAGACCCCCCCCCTTATGTAAGAGGACCCCCCTTAAGTGCAAAC
CCCCCCCCCCCTATTAAGAGGATCCCCCCTTAAGTGCTACCCCCCCCCCC
CTTAGGAAATCCATTTAAAATTAGAAACATGTAAATGATTTTTAAAGTTA
CGTTTAAATTTTTAGTATGAAATAATTTTCCTGTTAAATCGAGAAATATA
AAAGAGTTGATACTAATATTAGACGAATATGCTAAATTTTATACACTTTA
AAATAAAATATAATCGACGTAATTTTGTTCAATCATTCCAGCTTAATTAT
AAACGCTCGGGCTAAACCAATCTTATTTAAATTTTCTCACGAATAAATGA
ATTAAATATTTTTTTAATCTCACTAATCATTTTGATTAATAGGTGTTAAA
CATAAAACGGCGTTCGACAAGCGAACCCAATATGCCCAACATGAAACTCA
GCATGGAGTTTAATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000350XLOC_000350Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000596-exon-sc0000002-1575043694:1335663..1335950TCONS_00000596-exon-sc0000002-1575043694:1335663..1335950Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1328923..1329020TCONS_00000596-exon-sc0000002-1575043694:1328923..1329020Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1326515..1326611TCONS_00000596-exon-sc0000002-1575043694:1326515..1326611Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1326122..1326271TCONS_00000596-exon-sc0000002-1575043694:1326122..1326271Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1325127..1325273TCONS_00000596-exon-sc0000002-1575043694:1325127..1325273Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1324881..1324919TCONS_00000596-exon-sc0000002-1575043694:1324881..1324919Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1324466..1324579TCONS_00000596-exon-sc0000002-1575043694:1324466..1324579Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1323838..1324135TCONS_00000596-exon-sc0000002-1575043694:1323838..1324135Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1323622..1323722TCONS_00000596-exon-sc0000002-1575043694:1323622..1323722Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1575043694:1322434..1322508TCONS_00000596-exon-sc0000002-1575043694:1322434..1322508Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1335663..1335950TCONS_00000596-exon-sc0000002-1510915933:1335663..1335950Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1328923..1329020TCONS_00000596-exon-sc0000002-1510915933:1328923..1329020Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1326515..1326611TCONS_00000596-exon-sc0000002-1510915933:1326515..1326611Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1326122..1326271TCONS_00000596-exon-sc0000002-1510915933:1326122..1326271Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1325127..1325273TCONS_00000596-exon-sc0000002-1510915933:1325127..1325273Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1324881..1324919TCONS_00000596-exon-sc0000002-1510915933:1324881..1324919Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1324466..1324579TCONS_00000596-exon-sc0000002-1510915933:1324466..1324579Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1323838..1324135TCONS_00000596-exon-sc0000002-1510915933:1323838..1324135Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1323622..1323722TCONS_00000596-exon-sc0000002-1510915933:1323622..1323722Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1510915933:1322434..1322508TCONS_00000596-exon-sc0000002-1510915933:1322434..1322508Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1335663..1335950TCONS_00000596-exon-sc0000002-1491911889:1335663..1335950Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1328923..1329020TCONS_00000596-exon-sc0000002-1491911889:1328923..1329020Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1326515..1326611TCONS_00000596-exon-sc0000002-1491911889:1326515..1326611Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1326122..1326271TCONS_00000596-exon-sc0000002-1491911889:1326122..1326271Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1325127..1325273TCONS_00000596-exon-sc0000002-1491911889:1325127..1325273Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1324881..1324919TCONS_00000596-exon-sc0000002-1491911889:1324881..1324919Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1324466..1324579TCONS_00000596-exon-sc0000002-1491911889:1324466..1324579Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1323838..1324135TCONS_00000596-exon-sc0000002-1491911889:1323838..1324135Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1323622..1323722TCONS_00000596-exon-sc0000002-1491911889:1323622..1323722Clytia hemisphaericaexon
TCONS_00000596-exon-sc0000002-1491911889:1322434..1322508TCONS_00000596-exon-sc0000002-1491911889:1322434..1322508Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1322434..1335950 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.2103	10.9927	6.45478	8.52843	59.8535	48.4799	55.6467	61.895	39.0604	47.1875	30.4573	27.9539	31.7896	31.8678	32.1209	33.8096	31.1208	29.9412	25.4604	37.6368	18.1638	18.0852	26.7493	29.826	31.913	35.3972	20.8367	13.6151	32.6985	33.8129
Blast
[Close]
BLAST of TCONS_00000596 vs. Swiss-Prot (Human)
Match: PI42B (Phosphatidylinositol 5-phosphate 4-kinase type-2 beta OS=Homo sapiens GN=PIP4K2B PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 3.808e-97
Identity = 143/254 (56.30%), Postives = 186/254 (73.23%), Query Frame = 1 
Query:  235 FRVHDPKMAVLMWGVTHSVSQLSHVPQQVMLLKDDFKAYSKIKIDNHFYNKEHMPGHFKFKEYMPLVFRNLRERFAIDEKLYAASFL-IQPQLSKAQGNSGAKFLLTTDKRFYIKTLQSVEVEMMHHIMPSYHRYIVESHSDTLLPQYLGMYRTTLDNKEYYYLVVRSVFSCKKKVQKKYDLKGSRIDREAKDSEKDKESVTFKDNDFTKENARIFIGAEQKEKFKDRLTKDVNFLSGLNIMDYSLLVGIHDTE 993
            FR  +P ++VLMWGV H++++LS+VP  VML+ DDFKAYSKIK+DNH +NKE++P  FKFKEY P+VFRNLRERF ID++ Y  S     P  S +QG  G +FL T D+RF IKT+ S +V  MH+I+  YH++IVE H +TLLPQ+LGMYR T+D  E Y +V R+VFS +  V +KYDLKGS + REA D EK K+  TFKDNDF  E  ++ +G E K+ F ++L +DV FL+ L IMDYSLLVGIHD +
Sbjct:   36 FRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVD 289
The following BLAST results are available for this feature:
BLAST of TCONS_00000596 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PI42B3.808e-9756.30Phosphatidylinositol 5-phosphate 4-kinase type-2 b... [more]
back to top