|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000587 ID=TCONS_00000587|Name=TCONS_00000587|organism=Clytia hemisphaerica|type=transcript|length=1729bp
GTTTTAGATAAAACATATAGAGCatacaaaaagttataaaaaagttACAG
CATGGATAAATTCGTGATTAGAACACCACGTGATCAGGTCAATgacaaac
aaaatggtagacctCAGAAGCCAAGGAAGAAACAGACCACTATTGAGTCA
TTATCGAGGGTTGTTATCGTGGAACAGGTGCATCGTCAGaaagaaatcct
gaaaaacgCAGAAACCACACCACAATTTCTCATCTCAACACTAAAAGACC
TGCACAAAGCTATCCCTTCAAAAAGTGTTCTACTAGAGACGAAAGTTGGT
CACGTGGTCAATAAATTACGTCATCATTCCGATCCAGAGGTCAAAGAACA
GGCGCGTTTACTACTTAAGAAATGGAAGAAGTTTTATAGAGAGATCAATG
CACGCCAACCAATAGATGTACGGTCTGACTTGAAGACGGAAAAGTTCCGA
ACAAAAGCAAAACAGCTTTTAAGGAAAGCAATCGGCATTAAAGATGACCA
CGCTATAGCTTTGTCGATCGAGAAAACGATATACCGCGCTGAGAAATCGG
TCAACACGCCAAAATATCGGAGGCTGATACGAACTATATGCATCAAAGTA
ACTAATGACTCGCAGACCAAGGAACAACTCAAAAACGGCAAACTTTCTAC
TGTTTCGTTGATTAAAATGATTGAAAGTTCAGTGACTTGAGGTTTGACGA
ATGAAAACGGTTTTCAGTTTGAGAGGATTTGAAGGAATATGGTCAATGGG
CAGTAGTGACGGGTTGTACTGATGGAATCGGTAAAGAATATGCTAAACAA
CTTGCATCTCAAGGACTCAATGTTGTTCTCATCAGCCGTAATGTGGAAAA
GTTAAATCAAGTGGCTTCTGAAATCAAAGAATCTAGTAATGTTGAAACga
aaattattcaacatgacttTTGCAATATTGACGATGAAAAAACTTATGAA
TCAATGGCTTCTGACCTAAGGGATCTGGATATTGGAATTTTGGTCAATAA
CGTTGGAATGGCTCATGGTGGTCCTCTAAAAGCTTTTGACGAATTCAACC
TTAATCGAATGTTAAGCATCATAAAAGTGAACAATTTTTCAACTGTTCGA
ATGACACACATGATTCAAGGTGGAATGGTCAAAAGAGGGCGTGGCGCAAT
GGTTCATATCTCGTCTGGACTTGTATTCTTTAAAGGTGCAAAGGCTAACA
CGTACACGGCTTCCAAACAGTTTGTTTTGAAGCTAGCAGAATCGTTACGC
TTAGAATGTCAAGGAGTTGTAGATCACCAGGTACTCACCACTATGCAAGT
GTCGACAAAAATGACTGGAGCAAATCCTGATTTTGCAACACCTACTTCTG
AAAATTATGTGTCGTCAGCTCTTCGTACTATCGGCATTGCGCCCATAGCT
TGCGGTACTCCAGTTCATGAACTCCATCGTTTATTCATGATTTGTCTGTC
GGAGAAAATCAGCAATTTGGTGCATACATATACTTTTAGTAGCAGAAGCG
ATGCAAAGGGCAAAAGAGATTaatttccttttcaatttttccattcgatt
gcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttctc
CAACcagtcattcattcattcaaccGTCCACTCACCCATTCACACATTCT
TTTATCTTTGAAATAATGATACACAAAAG Run BLAST on NCBI transcript from alignment at sc0000002:1191593..1202743- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000587 ID=TCONS_00000587|Name=TCONS_00000587|organism=Clytia hemisphaerica|type=transcript|length=11151bp|location=Sequence derived from alignment at sc0000002:1191593..1202743- (Clytia hemisphaerica)
GTTTTAGATAAAACATATAGAGCATACAAAAAGTTATAAAAAAGTTACAG
CATGGATAAATTCGTGATTAGAACACCACGTGATCAGGTCAATGACAAAC
AAAATGGTAGACCTCAGAAGCCAAGGAAGAAACAGACCACTATTGAGTCA
TTATCGGTGAGCAATTGAATTTAATGCACTGCACAATGGTAAAGTACACA
GGATTTTTCATTGAAACTTCACACCCCCTTCTCACTTTTCACAGACCCGG
TAAGTTTTTTTCAGCCAGTGGGAGTAGAAATATCCGACAGGGTCAACTTT
TGGTCATTCCAAGAAACCATTTTTTAGGGTTTGTTTTAAAAAGTAATTGA
AACTTTGAATCTGATAGCATCCACAATCCAGGTAGTCAATAGATGGTTTT
TTATGTTTTGTTTTTAAGTTACGTAACTTCTGCAATTATGAAAGCAAACG
TTCGATTTGCGAATGTATCCTCTACATGTTCGAATGTTTGCTTCCATAAT
GGCTGAAATTACGTAAGATAGCCAAACATGAAAAACCTCTATACTGTATT
TACAATCGAAATCAAATCTTTTTAGAGGGTTGTTATCGTGGAACAGGTGC
ATCGTCAGAAAGAAATCCTGAAAAACGCAGAAACCACACCACAATTTCTC
ATCTCAACACTAAAAGACCTGCACAAAGCTATCCCTTCAAAAAGTGTTCT
ACTAGAGACGAAAGTTGGTCACGTGGTCAATAAATTACGTCATCATTCCG
ATCCAGAGGTCAAAGAACAGGCGCGTTTACTACTTAAGAAATGGAAGAAG
TTTTATAGAGAGATCAATGCACGCCAACCAATAGATGTACGGTCTGACTT
GAAGACGGAAAAGTTCCGAACAAAAGCAAAACAGCTTTTAAGGAAAGCAA
TCGGCATTAAAGTAAGTCGTATTTGATTTCTTTATTATCCTTTTTGCTGG
ACAAGTTTTTAAAAATCCTTCATGTGCAGATTGAACAGATTTCCCTTCTT
TTATAGGAAGTTGTCGTTTTTGTTTAGGTTTCAGTTTTCGTTATTTTTCT
TTGTTCAGAATGGCCCTTCATGGAATTAATTCTTCAGATGCTTAAAAGCT
TTTGAATTTCGGAGAATGCCACTTTAAAACAAATGTTATTGATTATTACC
CGCATCTGCATTCTTTGTCCTTAGCAGTAATAAATAGCCCCTGTTTTTTT
AGATCATTGGATTATGGAGTCTCCATTTCTAACGCAAACGTGTCTTCAAC
TCGAACAAGTTGATAGACCCTTCAAATTAGCAAACTCTATAAACCAGTCT
CAAAAACTGGGACAAATTTGTGTTCCCCGTGCGTGTTCTAATTCTAGAAA
TTCCACTGTATCTATGCTTGTTCTTATACTTTTAAATAACTTTAGTTTGG
GCAAAAATGAAAAAATGTAGTGTTTCTGGAAACCGGCCGGGTGAAAAAAA
ATAATTTTCTGACCCGGCCGCAGACTACATTAGTAGTTGATACATATTCA
AGGCGTACATAAAAGTTATCTTTAAAGTTCAATGATCTTAAGTTATCAAA
AATAGCAACAAAAAAAATTTTTCGGCCGGCCCCATGAAAGCTTTTTTCCT
TAACCCGCATTCCGGAAACACTACATTTTTTTATTTTCACCTTCCCTGTA
ATTTTAAAATCACAAAATGCAGACCCTAAAAAGGACATATTATTGACCTA
GGCCTTTTTCCTTCGAAGTATTTCATTATTTGATTGAAATAATAATTTTA
GAAACTTGCAAACAATCTCATTTCCAAAAGGGTTTTTTGAAATAATTTTT
GTGAACATGGATTCTAATTAACATCATTCAAAAATTAAGTAACTTTACGT
CTCTTTCATTAGCAAGGGAATGTTACAAAATTTCTTAGCAATTAAAATCA
AATGTATATAACGATTGAAAATAGAAAAATTCCATTGTTCTCTAAAAATG
TTAAAAATGTGAAAACCGCCTATACAAAAACGGCGAAAATATAAAGCTGC
AACCATCTTTTTTTTGCGTTTGGAAATGAATTTTGATTTTCTTGAACAAA
ATCTTCCGAAAATGGATTAATATTACAGGAAGATCTTGTAATATAATCTG
ATTGCAAACTTGCTGGATATATACCACACCTCGGGTGAAAGTTTATAAAA
AATTGAGCTCATAAAAACTTCAAGTCAGCTTATAGACTACGAATGCGTAG
GAGTAATAAGTAAATGAAGAAGTTTTTGGAAAAGTTGTTACATGATTCTT
TCGAAATACAGATAGAATAGCAAGATTTTTTTAGAACAGAGTTTATGTTT
TCTGAATGAAGTTTTTAAAAGCCATCAAACTTTCGATGATAAGCATATAA
TTAGGACAATTAAATGGGATTTTATCTTTTTTGACTACACATGTTATCAG
CAGTAATAGATTAGCCGACGAATTTTCATGTTTTAACTTTTAGTTTTTTT
CATATATATTTGTTCGTTAGGATGACCACGCTATAGCTTTGTCGATCGAG
AAAACGATATACCGCGCTGAGAAATCGGTCAACACGCCAAAATATCGGAG
GCTGATACGAACTATATGCATCAAAGTAACTAATGACTCGCAGACCAAGG
AACAACTCAAAAACGGCAAACTTTCTACTGTTTCGTTGATTAAAATGATT
GAAAGTTCAGTGACTTGAGGTTTGACGAATGAAAACGGTTTTCAGTTTGA
GAGGTTTGTATTGCATGAAAATTTCATTATTTTGGAAGACCTTTGGTAAA
GCTGTACCTTTAGCCTTTAACCATTGAACTTAAAGAGGATTCTCAATCGC
GGCTCGTTTTTTAACAATATTAAAAATTGGTTTGCTTGTATATTATCTGT
GTACATAGTTGTTTTTATTCAAACCCCAAGGAAAATGAAATTTTTACAGA
AACATTAATTAAATTGATTAATCCTCCTGAATATTTTCAACTTGAAGTTC
AAGCACAGAAGTGTTCTCATTTTAGTTGAATAAAATTTATAAACATATAT
TTAGACGTTTCGGTGTCTTCCGATCACCATATCATCAGTAAAAATTAGGA
AACACTAAACCAATTTTCAATATATCATCTAATTTACAAATACAGCCTTT
CCAAACATGATACATATAAATACTTCTAATGCATGGACAGATTTCGCAAA
ATGAAAGTAACCTGAAACTATTTGTTTCCATGAGCAAGTATTGACACGAT
ATTTCAATAATCTCTTGTCAATGAATTTATTTTATCAAAATAGATAATCT
TTGCAGCTCTTATTTCAGTTTGTTTCAGCTTGTTTGATTGAGCTCTCTGC
AAATTGATACATGTGTGTATGTAGAAAGAAACGTTGCTAGAAAACACACC
TCTTTTATGTAGGAAAGGAGTTTTCAGAAATTTGGGATCGTTTAAAGAAT
AATGGACAATTCATGTAACTGAGAGATGCAATTTTTGTGCTTTAGTGAAC
AAATTTTGGCCGAAATATGACAGACAGACAGACAGACAGACGGACAAAGT
TATGGTGAAATTTTTGCTTTATTCAAATTATTTTATTATTTTCCATTTTA
TTTAGAAAGATATAAAATACAAAAATGTCAGCGCTTTTATCCTTGATATT
TTACACGTGGCTAGGATATTGGTCATACCGTGTCATTAAATTCGTCTTGT
TTATGATCACGTGTCATGTTCTACCTTCTTTTGGTATTTATAATGACCTC
AAGAAGTATGGTCAATGGGCTATCATTACTGGCGCTACTGATGGTATTGG
TAAGGCTTATGCTGTGGAGCTCGCCAAGCAGAAATTCAACATCGTCTTGA
TCAGCCGAACGGAAGAGAAATTACAACGAGTGGCTGAGGAGATTAAAAAT
GCTCATGGTGTCGACACCAAATATATTGTTTTTGATTTTTCTACACCTGA
GGGTTATGAAGAACGTATTGGGAATGTGATCTCAGATCTGGATGTTGGAG
TTTTGGTCAATAACGTTGGTATGTCCAGTAAGTGGGATCGCTTGTATGAT
GAGTTGGAGATGGCTGAACATATCCGTGTCATGCATACCAACACCTTTGG
TGAAATGCATATGACGTATATGCTGACGAAGAAAATGATTCAACAAAAAC
GTGGTATTATGATTCACATTTCCAGCTTCTTTGGTTATTATCCGATCGGT
TTAATAAGTGTTTATTCACCTACTAAAGCCTTCGTCAACTCTTTCGTCCA
GAATCTCCAAGCTGAAACTAAACACTGCAAAGACGTCCATCATCAATTAG
TGACGCCCTTCTTTGTTGCCACAAATATGACCAAAGGGAGTGTTAAAGTC
ACCAGAGTTACCCCAGATGCTGCCACCTTTGCTGGCGCAGCTTTACGCAC
CGTTGGCTTAACGCCGCACACTTTTGGGTACTGGACTCATGATATTCTTG
GGTCAATCTTAATGACCTTTCCACCTTTTGTTTTTGGTAGATTACCGTTT
GTCAAAAGCTTTCAAAAGTATTGTAAAAACAGACGCTTAAAGACCCTCGA
GAAAAGCGAGTGAGAAAAACATTAGGTTGGTTTCATAATTTTGATTATTG
CTTTGTTTTTGCTACCCATTTATATCGTAACTTTTACAGTGCGTAGAGAC
CCCTAGATATCCAACTTCTCAGATAATCTTCCTGTCATTTTTGTAAATAA
TATTAACCTCTGGGTATCGTATTTTGAACCAGGGGGGGGCACGCAGTTAC
TACAAGACAGTATGACACTTACTACCGTGGTGGTACTGTATTCAGAAGTT
ATGAAAACAGTTACTACACAGTGTAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAACAGTTACTACACAGTGTAGTAACTGCTGTTTGGGGGTGGTGCCAAA
CACTAAAACTAGCACTTTTGGTGTAGTAAGTGCTTATATTTTGATTCTTT
TTAAAGAACTTTCAAAATTTTTCACAAAAAATGAATTTTTTTGTGAAAAA
ATTCTTTGTTAAAAAAAATATTTTTGTTATAAAAGGACGAAAAAAATTTG
AAATTTTTCTCAGACCCAACTTTGAAATTATGCTTTCCCTAATTATCATT
AAAATGTTTTCAACAGCTGTTAACCAAGTAAGTTAGAAGAAAATCTAGCA
CAAAAATGGCTTTAGGTTGAAAAATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
ACAGGGGTGGTACCTGGAAATCTTTTCTGAAAACAGTTACTACCAAGGTG
TAGTAACTGCAAAGGGTGGTGGTCCTGAAAAAAAGTGTTGAAAAAGCACT
TAATACACATCATGTCTTGTAGTAACTGCGTGCCCCCCCCCTGTTTGAAC
AAACAAAATTGGATATCCGCTATGCTCGATATAGTTATTTTTTGAATATT
TGCATTTGAAAATACCGAGCTCCCAATTAGCTTGATTTCTTCTTTTCTAT
ACTGATGGTAAAATAAACTGCATGGTTTTGGATGAGTTTCAATTTCCCAG
CTCCAAATGACAGTTGATAACACAGCCAATCAAATTTTGCTATTATTTCA
CTGGTCATACTTTCTTTATAGAAAAAACACAACTTTCTAAACTAGTTTTA
GTTTTAGTAAGTGAATTGAATCCGTCCTGTATTTTTATAAATTGATATAT
ACAGGACGGATTCGGAGCTCCCCGTCTGCTCGTTATTTGAATTCGTTCTG
TAAATTTCTTTTATCCACGCTTGATTATTATGAAGACATTTTAGAATTTT
GAATTTTATGAATACCGTATTACTTTGAATAAACGCCCCTCCTTTAAACG
CTCCATCGAATAAACGCCCATCCTGAAAATCAAAAAATTTACGAGGGGGC
GTTTATTCGAAGCAATACGGTATAATTTTTGTGACTATGATTTTATATGA
GGAAATAATGTAAACAAATTAAATATTTTTTATGAATCTTAAATAATCAA
TTGGATATAATATTTCAATAAAACTGCTGTTGTCAAAGATGATTTCATTT
ATTTTCTATTTCTTCACTTCATACACACTCCCTGGTGACTATAGGCTGCG
TCATATCTTCGAGCGTAAAAATTCTGCTCATGAAAAATGAGGAGCAAACA
GTAACAGAATTTATTTTTATTTCTTAATTTTTCATCCGAAATTTTCCAAA
TTTTTATTTAATTTCTTCTAGTTCTTCTTTTAGTTTTCTTTTCGACAAGT
AAAAAACTGCTATTTAATTTAAAACTCCATCACAGCTACATCCTTCTTTT
TCTCCGTTGCAGATTTTATTTCTGTTTAAACGTTTTATTGAACGTTGGAA
ATCTGCACATTACAGTGAACAGAGGGGGTACATGTTCAGTGTAGTAACCC
ATGGGGTAGTAACCTGATTTTCGGTAATTCTTAAAAAGTCTGGGACCACC
ACCCTTTTTTATTACATGGTACTAGTTTTTTCTGGGACTTCTTTATGGGA
CCACCCTTTTTACTACCATATAGTAGCTATTACCACCAATTCAAATCCTT
ATACCACCCTTTTTAGTACGTTGTAGTAGATATCACCGCCCATATGAATC
CCTATACCACCCTTTTAGTAACATGTAGTAGCTATCACCAGCCATTTCAA
TCCTCATACCACCCTTTTAATACCCTGTAGTGGCTACCATCACCTATCTT
GAATCTTTACAACACCCTTTTTATACGCTGCAGGAAACTAACCACCATTA
ATAATAACCATTCTTTCTGGTTCTTTTGAAAAGCAATAACAAATACAGCC
ATTGATACTAACCATGATTTTTTTCCTAAAATTTTGGGATAGAAAAGCTT
TCGCTGGCTCCTTGAACCTGCTTTAAACCTATTGAAAAGTGAAAATAGAA
AACTGAAAGATTTCTTACTAAAGTATAAGGGGAATTGGGGAGGATAAAAA
AGAATAGTAAGTTATTCCCAGGCAGTTTACTAAGCAATGAACAGAGTTTG
AAAGAAGTTTCGTTATATCAATATAGAGTTTTTTTGAGTCAGTTACATAG
ATGATTTTGTTTGTTTACAAGTCTGAATCTAATCTCAATTTCCAAAGCGC
ATTTACCATTCTCTCGTCTTTTCACATTTGTTAATGACTTCAAAATTCAT
TAAAAGCGTGTATTCTAGGCCTTACAAATGCCTGCCATTTCTGGCAGGCA
ATCCATCTTTTTAACTGCCCAAATCATTTCTTGAGTTGATGACTATTTTA
CGGTTTGAATAAGTTAGTCCTTCAATAACATTAAACGTAATGCAAGTTTT
TCCACCGAGCCCCAAAACCCCCAATAGTACCTGAAAGAAATAACAACTTA
ATAATCAAAATATTTTCAAAGTAAGCATAATGTGTCAGCTTACACCGCTC
TAAAAAAGCTCCATTTAATTTCGCAATCATTTTTTATCGAGATTAAGCTA
CAAATTATAAAGCTGTTCAAATATCATAATGTATTTCGTTTTTTTTGTCG
GGAAAGTGACGAACTTATTTTCTTCGAATATTTTACCTGACTATTTTTCC
GGATGGTATTTTTTTGCCATTCATTGTCAAAAGTTGACGGTTGAAAAATA
ATATAGTGAATAAGGAGGTGCAACTATGTTCCAAGGAGAGAAAGTTTCGG
TTTGACCCCACAATATGCCTTAAAATTGCCCTATTTTAGACTGATTATGC
CCTATCTCACAGCACTAGTTTTCCCACAGCGCGGATGAAAATTTCTGTTC
AAATCCCAGTGGAGATAGAAATTTTATTGTGCCAAGCTTAAAAAATCCAG
TCGGGATGGGTTTTGNATCTTACAGCACTAGTTTTCCCACAGCGCGGATA
AAAATTTCTGTTGAAATCCCAGTGGAGATAAAAATTTTATTGTGCCAAGC
TTAAAAAGTCCAGTGGGGATGGGTTTTAGTGTGCAAATTTTTACATTGAA
TTTCTAATTGGGATGAAGGCATTGTTAATCTCCCAGTGGGGCTGAAAGTG
TAGGTTATTTTACCCAGACGAAAGAGAAATTTTGTATACGAAATTTTGGC
CAAATTTTCCGGTGGGGCTGGGGACTCAGCGGGTCTGTGACACAGGGGTG
TTTGTTTTTTCAAAAGCATTACATACTTCTATTCGTTACAGTTTAATAAA
ACATTAGACAAGCTTACACCATGGAAGAAACATACTTGGTCTATCTTGGC
TGGTTATGTTTGATGTACATCACGTACCATATTGTTTCATACACTTGGTT
TATCGTTCGTACTTATTATTTGACTCGTATCCCTTATTTTCGTAAGAATT
TGAAGGAATATGGTCAATGGGCAGTAGTGACGGGTTGTACTGATGGAATA
GGTAAAGAATATGCTAAACAACTTGCATCTCAAGGACTCAATGTTATTCT
CATCAGCCGTAATGTGGAAAAGTTAAATCAAGTAGCTTCTGAAATCAAAG
AATCTAGTAATGTTGAAACGAAAATTATTCAACATGACTTTTGCAATATT
GACGATGAAAAAGCTTATAAAATAATGGCTTCTGAGTTGAGTGGTTTGGA
TATTGGTATTTTGATCAATAATGTTGGATTGGCTTATGGCTACGATTTAC
AACTCTTTCATGGATTCGATTTAACTCGAATGGCAAACATCATGAAAGTC
AATATGTTTTCTGTGGTTCGAATGACACATATGATTCAAGGTGGAATGGT
CGAAAGAGGTCGTGGCGCAATGGTTCATATTTCATCAGGAGCTGTCTTCA
CTAGAGCTGGTATGGCTAATACATATGCTGCCACAAAGTCGTTTGTTGTT
AAACTGGCAGAATCGTTACGCTTAGAATGTCAAGGAATTGTCGATCATCA
GGTCTTGACAACTCTGCAAGTATCAACGAAAATGTCAGATAGTAAACCCG
ATTTTAAAACACCAACTGCTTATGCTTATGTTTCATCAGCTTTACGTACC
CTTGGTCTTACTAATGTTGCGTGTGGATATCCTGCTCATGAATTCGTTCG
TTTAATTCTGATCAGCTTACCAGAGTGGTTAAGTGATTCCATTTATAGAA
CAGTTATTAAAAGTAACATGAAAATAAAAACTCGCTAATTTTTGTATACT
TGTAATATCTAATCATTTTTAATTCGAAACATCATTTATATATTAGTACT
CCGAAAAGCTGACCTTCCAAGTTTTAGTCTAAAATTGACCAATATTATTC
TCGTGTGCTCTTTCGTTTTTGATAATATGGATTACATACAATCGGGTGTT
AGAAATATCAACATTTGCTATTCGAATCGCTCGGGAAGCCTTTGTACGGT
CATCAGTTCAGCAAGAGAAAACTGCATAATTCTGCAGCCCTGTAATATTC
CACAACGTTGATGGTTTTTGCAACGCTTCCGCCAGGGGTGCGCTGTAATT
CTACGCAACGCTTTCAATTTTAAAGCTTGTAATTGAAAGTTATGAACGCC
GACCAATTTTTTTCGAAAAAAGCGAAGTTTACATGTTTTGAGATCCCTTT
TCAAAAGCAAAAGTTGCAATATTTTGCAGTGGACAGGAAAAGTTGCAAAA
TTTAACGTTGTAGAATTTGACAAAGCTAAAATTGTGGAATTTCGGAGTGC
TGCAATTCTATGCAATTTTCCGAACTGGTTAGTTAGTCGTTTTGAAATTT
TCCAGTAAATTCAGTTAAAAGCGTGGTTGATAAAGCTTGCATGACAGTAA
GTGTGCGAGATAGAGATTATTATATTTTGCTATCGTTGTAGACATAAAAC
AAAATATAAACAGCAAGAACATGGAAGAAACATACTTGGTCTATCTTGGC
TGGTTATGTTTNCTGGGGACTCAGCGGGTCTGTGACACAGGGGTGTTTGT
TTTTTCAAAAGCATTACATACTTCTATTCGTTACAGTTAAATAAAACATT
AGACAAGCTTACACCATGGAAGAAACATACTTGGTCTTGGTCTATCTTGG
CTGGTTATGTTTGATGTACATCACGTACCATATTGTTTCATACACTTGGT
TTATCGTTCGTACTTATTACTTGACTCGCATCCCTTATTTTCGTAAGGAT
TTGAAGGAATATGGTCAATGGGCAGTAGTGACGGGTTGTACTGATGGAAT
CGGTAAAGAATATGCTAAACAACTTGCATCTCAAGGACTCAATGTTGTTC
TCATCAGCCGTAATGTGGAAAAGTTAAATCAAGTGGCTTCTGAAATCAAA
GAATCTAGTAATGTTGAAACGAAAATTATTCAACATGACTTTTGCAATAT
TGACGATGAAAAAACTTATGAATCAATGGCTTCTGACCTAAGGGATCTGG
ATATTGGAATTTTGGTCAATAACGTTGGAATGGCTCATGGTGGTCCTCTA
AAAGCTTTTGACGAATTCAACCTTAATCGAATGTTAAGCATCATAAAAGT
GAACAATTTTTCAACTGTTCGAATGACACACATGATTCAAGGTGGAATGG
TCAAAAGAGGGCGTGGCGCAATGGTTCATATCTCGTCTGGACTTGTATTC
TTTAAAGGTGCAAAGGCTAACACGTACACGGCTTCCAAACAGTTTGTTTT
GAAGCTAGCAGAATCGTTACGCTTAGAATGTCAAGGAGTTGTAGATCACC
AGGTACTCACCACTATGCAAGTGTCGACAAAAATGACTGGAGCAAATCCT
GATTTTGCAACACCTACTTCTGAAAATTATGTGTCGTCAGCTCTTCGTAC
TATCGGCATTGCGCCCATAGCTTGCGGTACTCCAGTTCATGAACTCCATC
GTTTATTCATGATTTGTCTGTCGGAGAAAATCAGCAATTTGGTGCATACA
TATACTTTTAGTAGCAGAAGCGATGCAAAGGGCAAAAGAGATTAATTTCC
TTTTCAATTTTTCCATTCGATTGCGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCTCCAACCAGTCATTCATTCATTCAACCGTC
CACTCACCCATTCACACATTCTTTTATCTTTGAAATAATGATACACAAAA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000587-exon-sc0000002-1575043694:1202588..1202743 | TCONS_00000587-exon-sc0000002-1575043694:1202588..1202743 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1575043694:1201833..1202168 | TCONS_00000587-exon-sc0000002-1575043694:1201833..1202168 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1575043694:1200041..1200273 | TCONS_00000587-exon-sc0000002-1575043694:1200041..1200273 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1575043694:1191593..1192596 | TCONS_00000587-exon-sc0000002-1575043694:1191593..1192596 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1510915933:1202588..1202743 | TCONS_00000587-exon-sc0000002-1510915933:1202588..1202743 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1510915933:1201833..1202168 | TCONS_00000587-exon-sc0000002-1510915933:1201833..1202168 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1510915933:1200041..1200273 | TCONS_00000587-exon-sc0000002-1510915933:1200041..1200273 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1510915933:1191593..1192596 | TCONS_00000587-exon-sc0000002-1510915933:1191593..1192596 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1491911889:1202588..1202743 | TCONS_00000587-exon-sc0000002-1491911889:1202588..1202743 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1491911889:1201833..1202168 | TCONS_00000587-exon-sc0000002-1491911889:1201833..1202168 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1491911889:1200041..1200273 | TCONS_00000587-exon-sc0000002-1491911889:1200041..1200273 | Clytia hemisphaerica | exon |
| TCONS_00000587-exon-sc0000002-1491911889:1191593..1192596 | TCONS_00000587-exon-sc0000002-1491911889:1191593..1192596 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:1191593..1202743 - |
Blast
BLAST of TCONS_00000587 vs. Swiss-Prot (Human)
Match: DHB12 (Very-long-chain 3-oxoacyl-CoA reductase OS=Homo sapiens GN=HSD17B12 PE=1 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 2.405e-44 Identity = 96/232 (41.38%), Postives = 140/232 (60.34%), Query Frame = 3
Query: 741 GQWAVVTGCTDGIGKEYAKQLASQGLNVVLISRNVEKLNQVASEIKESSNVETKIIQHDFCNIDDEKTYESMASDLRDLDIGILVNNVGMAHGGPLKAFDEFNLNRML-SIIKVNNFSTVRMTHMIQGGMVKRGRGAMVHISSGLVFFKGAKANTYTASKQFVLKLAESLRLE--CQGVVDHQVLTTMQVSTKMTGA-NPDFATPTSENYVSSALRTIGIAPIACGTPVHEL 1424
G+WAVVTG TDGIGK YA++LA G+ VVLISR+ +KL+QV+SEIKE VET+ I DF + E Y+ + + L L+IGILVNNVGM++ P D +L+ ++ +I +N S +MT ++ GMV+R +GA+++ISSG Y+A+K FV ++ L E +GV VL V+TK+ P P+ E +V SA++T+G+ G +H L
Sbjct: 50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFAS---EDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYF-VATKLAKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHAL 277
The following BLAST results are available for this feature:
|
