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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000562 ID=TCONS_00000562|Name=TCONS_00000562|organism=Clytia hemisphaerica|type=transcript|length=1537bp
TTGGAATGAAGCtttatcgaaatcccaatgggataAAAAGACAGTTTCCA
ATTTTCACTGCTTGATTTTGAATGGGAATAAAATCGTCGGGTGATATCGC
AGAGAGGTtaaaattggtattttttttAACGGGGACGAGTttctggccaa
tttttccagttggCCGTGGgaccaccgggtctgtgacacgacGTTGTTTC
GTATCATCCTTCTTTATTTATCTTACTCTATTCGTTTTCTCTTTTCAGCT
CAGTGGATTAGCACTCATTATAATAGGGTCGTATATGAAAACACGATATG
GTGATTATCTATCTTACGGTGACGGTTACAAATTTCTATCAGTATCAGTC
TTCGTTATTGTTCTTGGTGTAATTATTTTCATTCTTGGATTTTTGGGTTG
CTGTGGAGCTATCAAAGAAAATTACTGTATGATCACAACATTCGCAATTC
TCATGAGTATCATTTTGATTCTTCAAATTGCAGCTGGTGTTCTTGGATTT
GTTTACAAAGGAAAGGCAAAATAACTTCAGTATGGGtaaacccccttctc
acagacctggcatgagttttttagccagtgggggtaaaaataacggacaa
gAACTTGATGGGGGATTGCTATTGCCATATTTCTATCTATTGTTTTTCAG
CGGGGATgggaaaaaaaagatatttttgcagtgaggattattttcagtgg
ggacggaatttggagtataattttccactggggaggatatttaggccaat
ttttcaagtggggctgtgagaagggggtatacGGATTGTGGAAATACTCT
CATACCTCTACAAATACAGCTACATGCTAGGGCCCTAGANAGGGGTATAT
GGATTGTGGAAATACTCTCATACCTCTCAAAAAACAGCTACATACTAGGG
CCCTAGAACAATTAATTACCCAACAGCTGTCTGAAGGCAATCGTTTAGGC
TTCTGCTATCCTCTGGAGGAAGATATCAATCTAGTTATTTTCTGCCCTGC
ATATTAGAGGTTAATTACAGGTATCAAGCGGTGACACAAATAGCActgtc
ttcattttttttgggaattttaatGTAAGAAATGGCATATATTCGTTCCT
AAGATCTTTGTACTACTATAAGTTTactaaaaattaattttcaacaCGAC
AGGTCGAAACAATCGTTGAAAATACATTAAACGGTGCtgtgcaaaaatat
tttgacgatAGCCAACCAGGTGCTAAAACACTCTTAGATTGGGctcaaca
aaaatttgaatGCTGTGGAATCAAAGGGCCTGGTGACTACAGACAACCCT
CCACAACATCATCTTATTACTGTGCCAAGTCTGGTGGTGTGGCTTCTTGT
TACTCTGATAACAAATGTGGTTCTGGCGTCCAATATGGTGAAGGTTGCGA
GCAAAGTGTAATTGATATTGCCAAGAATAACATGTTACTGTGTGGTGCTT
TTGCAATAGCATTNGAGTGTAATTGATATTGCCAAGAACAACATGTTACT
GTGTGGTGCTTTTGCAATAGCATTCGCTCTAATACAA Run BLAST on NCBI transcript from alignment at sc0000002:699860..701396- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000562 ID=TCONS_00000562|Name=TCONS_00000562|organism=Clytia hemisphaerica|type=transcript|length=1537bp|location=Sequence derived from alignment at sc0000002:699860..701396- (Clytia hemisphaerica)
TTGGAATGAAGCTTTATCGAAATCCCAATGGGATAAAAAGACAGTTTCCA
ATTTTCACTGCTTGATTTTGAATGGGAATAAAATCGTCGGGTGATATCGC
AGAGAGGTTAAAATTGGTATTTTTTTTAACGGGGACGAGTTTCTGGCCAA
TTTTTCCAGTTGGCCGTGGGACCACCGGGTCTGTGACACGACGTTGTTTC
GTATCATCCTTCTTTATTTATCTTACTCTATTCGTTTTCTCTTTTCAGCT
CAGTGGATTAGCACTCATTATAATAGGGTCGTATATGAAAACACGATATG
GTGATTATCTATCTTACGGTGACGGTTACAAATTTCTATCAGTATCAGTC
TTCGTTATTGTTCTTGGTGTAATTATTTTCATTCTTGGATTTTTGGGTTG
CTGTGGAGCTATCAAAGAAAATTACTGTATGATCACAACATTCGCAATTC
TCATGAGTATCATTTTGATTCTTCAAATTGCAGCTGGTGTTCTTGGATTT
GTTTACAAAGGAAAGGCAAAATAACTTCAGTATGGGTAAACCCCCTTCTC
ACAGACCTGGCATGAGTTTTTTAGCCAGTGGGGGTAAAAATAACGGACAA
GAACTTGATGGGGGATTGCTATTGCCATATTTCTATCTATTGTTTTTCAG
CGGGGATGGGAAAAAAAAGATATTTTTGCAGTGAGGATTATTTTCAGTGG
GGACGGAATTTGGAGTATAATTTTCCACTGGGGAGGATATTTAGGCCAAT
TTTTCAAGTGGGGCTGTGAGAAGGGGGTATACGGATTGTGGAAATACTCT
CATACCTCTACAAATACAGCTACATGCTAGGGCCCTAGANAGGGGTATAT
GGATTGTGGAAATACTCTCATACCTCTCAAAAAACAGCTACATACTAGGG
CCCTAGAACAATTAATTACCCAACAGCTGTCTGAAGGCAATCGTTTAGGC
TTCTGCTATCCTCTGGAGGAAGATATCAATCTAGTTATTTTCTGCCCTGC
ATATTAGAGGTTAATTACAGGTATCAAGCGGTGACACAAATAGCACTGTC
TTCATTTTTTTTGGGAATTTTAATGTAAGAAATGGCATATATTCGTTCCT
AAGATCTTTGTACTACTATAAGTTTACTAAAAATTAATTTTCAACACGAC
AGGTCGAAACAATCGTTGAAAATACATTAAACGGTGCTGTGCAAAAATAT
TTTGACGATAGCCAACCAGGTGCTAAAACACTCTTAGATTGGGCTCAACA
AAAATTTGAATGCTGTGGAATCAAAGGGCCTGGTGACTACAGACAACCCT
CCACAACATCATCTTATTACTGTGCCAAGTCTGGTGGTGTGGCTTCTTGT
TACTCTGATAACAAATGTGGTTCTGGCGTCCAATATGGTGAAGGTTGCGA
GCAAAGTGTAATTGATATTGCCAAGAATAACATGTTACTGTGTGGTGCTT
TTGCAATAGCATTNGAGTGTAATTGATATTGCCAAGAACAACATGTTACT
GTGTGGTGCTTTTGCAATAGCATTCGCTCTAATACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000562-exon-sc0000002-1575043694:699860..701396 | TCONS_00000562-exon-sc0000002-1575043694:699860..701396 | Clytia hemisphaerica | exon |
| TCONS_00000562-exon-sc0000002-1510915933:699860..701396 | TCONS_00000562-exon-sc0000002-1510915933:699860..701396 | Clytia hemisphaerica | exon |
| TCONS_00000562-exon-sc0000002-1491911889:699860..701396 | TCONS_00000562-exon-sc0000002-1491911889:699860..701396 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:699860..701396 - |
Blast
The following BLAST results are available for this feature:
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