TCONS_00000545 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00000545
Unique Name	TCONS_00000545
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1833

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000002:470542..486348-

transcript sequence

>TCONS_00000545 ID=TCONS_00000545|Name=TCONS_00000545|organism=Clytia hemisphaerica|type=transcript|length=1833bp
gttcaaaattattaaaaattatgtgaaaataatataaaagaaaataatgt
aaacaaagatgccgaaaaaggccaaaaaagctaaaggaaaatctaaaaaa
gacaaaaaaggAAGGAAGTCATCAAAAGGAGTCAAAGTCAATAATGACGA
CGTTTTGAAACAAGCTATAGCCAATGCTTGCTTATGGGAAAGTCGTCTTG
GAACTGTCGAAGTTGCCAAAAATGAGTATAGGGACACGACACGAACGTTG
CTTCATGAAAATGAGAAACTTCAAACACAAGTATCACAGACAGAGAAGGA
GACTGTTGACGTCCTTAGTTTCCTGAGGGATGAAGATATCAAGAAAAATA
ATACGATCAACAAACTACAACTAATGATCAAAGACTTGAAAAAAGattac
aagaaagaaaaacaaggaTTTATAGATGACTACACCAAACAGATCGAAAC
ACTTCAGACAAGTCTAACGGACAAAACAAATGAAGTGAAACTGATGCAAT
CGGAGTTGAAATTGGTGAAAGAATTTCGTCGGAAAAGAGCTCTCATGCAG
AAAGAGATTGATGATATCAAAGACAATCTTTTCATGAACGAAAAACAACA
TGAAAATGCTCTGGAAAAAATCGAAAGAAAGTTCTTCGATGAAAAGATTC
GTATGCAGCAAGAAGCCAATCGAAAGATTTCCGAACTTGCTGAAAGAGCT
CATAACGAAGCTATCAGCAATTTGGACGATACAACGAAATCAGTTTATAA
AGAGAACGTTCGATTAAACGAAGCATTGACTTATCATATAAAAGCTGGTG
AAGAACTATCACAGcacaaagaaaatttggaaGAGCAGAACAAGAAATTA
AGCAGTGAAAAAGAAATGAACAGCCTCATCGTCGAAGAGAAAGTCATCGA
AagcaagaaaattaaaaaagctaACAGCTCGCTTCAACAAAAAGTTGATG
ACCTTGAGAAAGCATTGACAGAAGTGATGTCGGAgaataatcaaaagaaa
acatcCTTAGTTCAGAAACATAATCAAGAACAAGAGGGAAATAAAATGGA
AATAGCACGGCTACAACGTATCATTGAACTAAAGAATAAGGAGATGAGCC
GTGTCAAGAAACTTGCCAAAAACATCCTCGATCAGCGTTCAGATGTCGAA
AAATTCTTTATCGAATCATTGGAAATGGTCAAAACTGAAATCATCAGAAA
TCGtgcgCAATATCGACGAGACGCTGAAGTAGCATACAATAAAAGAATGA
CCGAAGCACATTCTGGTCACTCTGATTATCCCAAAGTCCGCACATTTCGT
CATCTAAAGAACAGCACTAATTCCGTGTACGCAGATCTACGCGCGGCCGA
ACGGTGGGATGGGTTTGACGCGTCGGTTGATCTTTCAGAATTAACATGGG
AACAGAGAGAACAGGTTCTTCGCTTGTTGTTCGCTAAGATGAATGGCCAG
AAAACATCAAAAGTCAGCAAAAGTATACTTCCACCCATCAACAGTAAGAT
GGACGAAACTAAAGCTCATCAACCGAAACCACCTTCCGTTCAAAAAGCTT
TTCTCACGGAAGCCGATGATCCAAAAGAGGGTGTCAGTAGTGATGCAAGT
AGGGTATTTTCAGCCACTGAGATCCTTGCTTTTACATGACTTTTATGACT
TAGCAATTTTTAGGGTACTGATTatttgtaattaattttttttgaaaagt
tgtatATAATAGTTTGTGTATAGATTTAATCAGAATAGAAtgtgatttta
ttttattaccttgtaaaataattaattttttaatgatggtttaatttatt
ttttggtaaagaCTGATTCAAGGAAAAGTAATT

Run BLAST on NCBI

transcript from alignment at sc0000002:470542..486348-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00000545 ID=TCONS_00000545|Name=TCONS_00000545|organism=Clytia hemisphaerica|type=transcript|length=15807bp|location=Sequence derived from alignment at sc0000002:470542..486348- (Clytia hemisphaerica)
GTTCAAAATTATTAAAAATTATGTGAAAATAATATAAAAGAAAATAATGT
AAACAAAGATGCCGAAAAAGGCCAAAAAAGCTAAAGGAAAATCTAAAAAA
GACAAAAAAGGGTAAGAACTTTCTTTCATTTTTACTTCAAAAAGACTTAT
TTTTACTGAAAAAAAGCCTCTTCGACAAGGCTATAAGCAGAGGAAACAAA
AAATGCTATAACTTCTTATAGAAATAGAACCAAATGTTTTTGTACTTGTT
GAAAAGATATTCAGGAGTGGAACATTATTATAAAGAAAAAACTTTTCTTT
AAAAAATTTTTTTTCGCAAAAAGACTTTTTCACAGTGATAACACTTTAAG
ATTGAAGATATTTTTATTTAAAAATGGTGACCATAGCACAATTAATTCTA
CAAGGGCTGGATTTTTCTCTTCTTTACTTTTCTTTATTTTTTTAATCTTA
GAAGGAAGTCATCAAAAGGAGTCAAAGTCAATAATGACGACGTTTTGAAA
CAAGCTATAGCCAATGCTTGCTTATGGGAAAGTCGTCTTGGAACTGTCGA
AGTTGCCAAAAATGAGTATAGGTAATGATTATTTTTCTAACAGATCATTC
ATTCTACCAGCACTTTGCTTTGCACTAAAGGTACAGCTCTCTTTTAGTAA
TACTCATCCAATATCGATATTTACTTGGATAGTTCAGTAGTCTGCTAATT
TTAGACAGTCTTTTGATTATTTTCACCGGTCCAGGGCCAGTCGGCTATCT
ATGAACTGAACAGAACATTGAAAGGAGCGGGGATTCGACTTTGGAATTTG
TTTAATATTTTTATTCTTTATTTAAAGTTGGGGACGCTAATAGAAATACA
CAAGTATAATAGGAATTCTGATCAAATCCAACCAATTTCTAAGATAAAAA
GAATTGTTAAACCTCTCAACCAATCTTAATAGGGACACGACACGAACGTT
GCTTCATGAAAATGAGAAACTTCAAACACAAGTATCACAGACAGAGAAGG
AGACTGTTGACGTCCTTAGTTTCCTGAGGGATGAAGATATCAAGAAAAAT
AATACGGTATTCATCAGTTTAATCATAACCATCATGGACCTAGAGTTTTT
TCATGGCACGATGAGTGTCCTCTCATTTGGGAGGGGCGGTTACAAAGTTA
GGGTACTTGACTAGTGCCATAAATGTGTACTAACCACTGACCTTTATATA
TCCCTGGAACAAGCTATATCCACCATCTTTGATCAGAGTTTTTTTGGAAT
TGGTACCCGAGAAGAATCCATTGCAATGTTAAAAATTAACATATATAAAG
GCCCTACATCATCAAAAGTATTCGAGATAAAGTAGATCTAGCGCTCTCGA
TGCATTTTCACCATTTCGCCATTAGGGTACCAATTTCAAAAAATCTCCGA
TCAAAGATTTTTGGTTGGCCGGAATTGAGTAACTTGGTCAAGGGTATATA
AAGGTGAGTGGTACTAACATGGTTTTGGGAATGGAGTTTTGACCATCATC
CGTTTGTACCTTAATATAAAAAGTTGAAAATATGCCTTCAATGTAGGTAG
ACCACCCCTAACTAACTGGAATTACCTGTTAAAATCCTTATTTTGACGGG
AAAGCAAGAGTAGAATTATACAGCCTAGTACCCAAAAATGTCCTAAGTTT
TTACTTCCCTTAAAAATAAAAAATAAACACTTTTTCTTAGGCACTTTTCG
ATACTGAGGTATTATAATCGACTTTTTTTCTCCAAATTTGCACAAGGTAA
AGTTGAAAATCAGCTTTTAAATGAATTTCCAGCTTTGACCACTCCACTTA
GTACATGGTACTAAGTTGTTTTTGACTTGCCAATTTTGACCATCAACCCC
GGTAGTGGTCCCTACAATCTAGTACTGAGCCCCTGTTCAATAGATTTGAT
TTAGACCTCGACTTGGGGTTCCATCGATATCAAGGACAATCCTCTCCAGG
TCGACGAATAAGAAATCCATTGTACTCTATAACTTTTTTGAATTCTTTAC
AGTATTCTATACATTGTCGCTTTCCTATTACAGTATCTGTAATATGCGAG
AAATCGGTCTTGTTTTTTTCATTGCCTTTTCCTTGGTTCCATACGTAAAT
ATAACCGACATCTCTTCAGAAGTATGCAGTATGTTTTTTAATAGGGATAA
TAATATATTTTCGTAATACTTTTCAAAAGGGTGGAAAATTTCTTGCTCTA
CTGAAGAAATTTGAAATTCGATTGTCTTATTCGATCATTATTTTTTTTGT
TGGTCGTTCTGTTCAATTTAGTTCTTATTGATCCGATCGTCTATTCCGTT
CGACTGAGATTACCTACCGAGCAATTTTAATACATATGTATCTCATATGA
CATGGAGTTTTTGGCGGGAATTCGTTTGGTTTATTTTAGAGGCAGCCTAA
AAATGCCTTGCGCCGAGAGCAAGTAAATCTTGCTTGTAAATTCGTTCCCA
TTCCTCTAAAAAAGGCGACCGCGCTGATGCAAAGGGTTGATTGATACATT
CGAACCTACACCATTCGGAGCTCAAGATTAATTGAAAGTCAACTGTTGTT
ATACACGCTTTTTTTATTATAAGAACAAACTATATAAGAACATAAGGCTT
CGATGGCCAAAATGTGAAGAACAAGTTAAGAACATTTGAAGGCTTTGCAG
GGCTTTGCGGACTCGAAAACACCCTATTTCTTAGGAAAGTGGGTAAGAAT
GGTCACAAAATGGTGAAAGTAAGCACATGTTAAGAACATTTTTAGGCTTA
AAACTGAAAAAGTTAAGAACATCCAAAGGTTTCAAAATTTTTGGATGTTC
TTATAAAAAAAGGTATCTTTTATTATCCATAGATCAACAAACTACAACTA
ATGATCAAAGACTTGAAAAAAGATTACAAGAAAGAAAAACAAGGATTTAT
AGATGACTACACCAAACAGATCGAAACACTTCAGACAAGTCTAACGGACA
AAACAAATGAAGTGAAACTGATGCAATCGGAGTTGAAATTGGTGAAAGAA
TTTCGTCGGAAAAGAGCTCTCATGCAGAAAGAGATTGATGATGTATGAAA
TGTTTTTCTTCTTCGTTTTTTTATGGATTTTCTTTTAATAGACCTTTTTG
TAAATTACGTCACGAACATCACTTGCCTCGTATTCAAACAATTACCATGG
TGATTGTGTCCCTTGAGACATTAAATGAATATTTTTTGATGAATAGGAAG
TAGTGGACTCCGCTGGGAGTTAATCACCATGGCAATAATTTCAAAACGAG
GTAAGTGATGTTCGTGACGTAATTTATGAAAAGGTCTATTCGTTTGGATA
TTATCATAATAATATAGAAAGGAGGCGCGTCTCTTATGCCGACAAAGCAG
AATCAACAAAATAGTTTCTCGTTACTCAAAATGTGTGCTCGTGCGGTGGG
AGGGGGGAATCTTTTTTTCTTTTTTTGTTTAAAACTGCTGAAAACGCAAA
TGGTAGGAGATCCGTTAAAAATATCCTTTAATATGCTTAAAATTTCAAAT
TTTGATACAAATATTATGGAATTATGGTTAGCCACAGTCAAACTTTTGAT
GTAAAGTCTCATTTCTTCTATTAGTAAGATCAGTGCATGGCCGCAATTCA
TAACATCTCGAATTAGAAATTCGTTGCAATTTCTAATTTGACGACCTTTA
CGGTATTTCTTTTTGCAGTTTGCGATTATTTCCAATCTCTTTTGATACTC
GTTTTCTTTTTAGATCAAAGACAATCTTTTCATGAACGAAAAACAACATG
AACATGCTCTGGAAAAAATCGAAAGAAAGTTCTTCGATGAAAAGGTATGA
TTTTCACATTTTCATTTCCAATCTTGTTTAAGTTAAGAATGATAGGGAAA
TTTCGTCGTTTGATCTAAAAATTATGCTTATTTATATCGATTATTTCCTG
CTTAACGCGAGTTTTTGATGTGATAACATCATTGTATTATAAACTTTTTA
GATTCGTATGCAGCAAGAAGCCAATCGAAAGATTTCCGAACTTGCTGAAA
GAGCTCATAACGAAGCTATCAGGTATATTAATGAAAAGGCATCTGTTTCA
CGATTACCTCAAGGGGATTAATTTCCGCAAGGATTATATTTTGCGAGTTT
CGCGAGTTTTTTCAAAAACTTGCGAAATTTAATCCTCGCGAAAATTCATC
NAAATTTTTGGATGTTCTTATAAAAAAAGGTATCTTTTATTATCCATAGA
TCAACAAACTACAACTAATGATCAAAGACTTGAAAAAAGATTACAAGAAA
GAAAAACAAGGATTTATAGATGACTACACCAAACAGATCGAAACACTTCA
GACAAGTCTAACGGACAAAACAAATGAAGTGAAACTGATGCAATCGGAGT
TGAAATTGGTGAAAGAATTTCGTCGGAAAAGAGCTCTCATGCAGAAAGAG
ATTGATGATGTATGAAATGTTTTTCTTCTTCGTTTTTTTATGGATTTTCT
TTTAATAGACCTTTTTGTAAATTACGTCACGAACATCACTTGCCTCGTAT
TCAAACAATTACCATGGTGATTGTGTCCCTTGAGACATTAAATGAATATT
TTTTGATGAATAGGAAGTAGTGGACTCCGCTGGGAGTTAATCACCATGGC
AATAATTTCAAAACGAGGTAAGTGATGTTCGTGACGTAATTTATGAAAAG
GTCTATTCGTTTGGATATTATCATAATAATATAGAAAGGAGGCGCGTCTC
TTATGCCGACAAAGCAGAATCAACAAAATAGTTTCTCGTTACTCAAAATG
TGTGCTCGTGCGGTGGGAGGGGGGAATCTTTTTTTCTTTTTTTGTTTAAA
ACTGCTGAAAACGCAAATGGTAGGAGATCCGTTAAAAATATCCTTTAATA
TGCTTAAAATTTCAAATTTTGATACAAATATTATGGAATTATGGTTAGCC
ACAGTCAAACTTTTGATGTAAAGTCTCATTTCTTCTATTAGTAAGATCAG
TGCATGGCCGCAATTCATAACATCTCGAATTAGAAATTCGTTGCAATTTC
TAATTTGACGACCTTTACGGTATTTCTTTTTGCAGTTTGCCATTATTTCC
AATCTCTTTTGATACTCGTTTTCTTTTTAGATCAAAGACAATCTTTTCAT
GAACGAAAAACAACATGAAAATGCTCTGGAAAAAATCGAAAGAAAGTTCT
TCGATGAAAAGGTATAAATTTTCACATTTTTCCCAATCTTGTTAAGTTAG
AATGATAGGGAAATTTCGTCGTTTGATCTAAAAATTATATCGATTATTTC
CCGCCTAACGCGAGTTTAATTGTGATAACATCATTATGTATTATAAACTT
TTTAGATTCGTATGCAGCAAGAAGCCAATCGAAAGATTTCCGAACTTGCT
GAAAGAGCTCATAACGAAGCTATCAGGTATATTAATGAAAAGGCATCTGT
TTCACGATTACCTCAAGGGGATTAATTTCCGCAAGGATTATATTTTGCGA
GTTTCGCGAGTTTTTTCAAAAACTTGCGAAATTTAATCCTCGCGAAAATT
CATCTTGCACAGTTTGTCCATGTTTGTCTCTTGAAATCTCAAAAACCCTT
AGGAAATTGAAAGAAAATAGTCAAAGAAGGTAATTATCTCGCGAAAATAA
GTCCCGCCAAGATTAAATATTTTCGCGAAAATGTCTTCCCGTGAAAATTA
ATCCCCTAAGGTATTCAGTCCACTTGCCAAAACGCATAGCAGAGTTGTTC
TCTTTGACTTCTGTTTGATTTCTGTTGATTATGTATGTTTACTAACTGAT
TTTTTATCTCTTTATTCTTTTTTGACGTTTTGAGAATTCTAGAGATGGTG
AAGAAGATTATCTTTTTCAATGGTTATTATCAGATTTACAAAATATTTTG
GATTTGGGAAAAATGAAGATAGGGCAAATATACGCGAAGAGCATGGCTCT
GTGACTTCCAATCTCGCACAAGGTTTCTTATGGCAAAGATATAACGGCCT
TATCCGTTACATTGCAATACGAAGCGCAAAATTCCTCATAATTATGTGAT
TTTTAAATCGTTGGTTGAAATAACACATGCAAGACCATTTTCCATTCCAT
TATACAGTTGGGTGTCTTTAGCTCGAACCTTCATAGCTCGAATGTCTTCT
TGACACGAACAAGTTTTATGGTTTCAGTTAACAATGTCTTATAAACCTTA
CTCCAAAACTCGAACAATATTGTGTTCCCCGTGCGTGTTCAAGTTATAGA
GACTCCACTACTGTACATGTTTTTTTATAAGCATATTTTTTTTGAAAAAC
AAGTTATGCTTATGCTACATTTTGAAATCAAGCTCAAATTATGCTTGTGA
TATGCTTATTTTTCCGAAAAAATTGGTTCTTTAAAAATGGAAAAGAAATG
ACCAAAGGCCAAAGCTCACTGATATGCTAATGATATGCTTATCTTTTCAC
CAGCCCAGGTCTTAGTATGCTTATAAACGTTATGCTTTTAAAAAAACATA
TATTTCAGCATTCTACAGAATAGCGCTCCGCAACGCATACGTCATAATTA
TTACTTTTCACTTCTTTTTGACATTTGTACGAAATGCAATCCCACAATTC
AATGCGGCTCAATTAAAGATACGTGCAAGTTGTTGTATACAGCTTTTGTG
AAATGATGCAATTAACGTGAATAGAGATTTTTAACTCAAAGGTTGACAGG
ATTGGAACTCGTACAAACACATCGAAAGTAATGATTAAGTCAAAAATGAA
ATCTATTTTAGATTCAGTGCAGTGCGCTATTAACTTCTCCAATTTTAACT
CGTTCTCTTTCCCATATTACGCAGCAATTTGGACGATACAACGAAATCAG
TTTATAAAGAGAACGTTCGATTAAACGAAGCATTGACTTATCATATAAAA
GCTGGTGAAGAACTATCACAGGTTTGTGTTGACTACNCCCCTGTTACGCA
GCAATTTGGACGATACAACGAAATCAGTTTATAAAGAGAACGTTCGATTA
AACGAAGCATTGACTTATCATATCAAAGCTGGTGAAGAATTATCACAGGT
TTGTGTTGACTACATTATACTTAAAATCTATCACTTAGCAAAAACCTTCA
AGTTTAAAAATCTTGAAAGATACTCCCACAAAACTGATGCATTTAAGCTA
CCATCACAGCGTTACTGCAAATTATACTTAAAATCTATCACTTAGCAAAA
ACCTTCAAGTTTAAAAATCTTGAAAGATACACCCACAAAACTGATGCATT
TAAGCTACCATCACAGCGTTACTGCAAATTGTTCAAATATTTTTTTTTAT
TTGACATTATGTTAACCACCCTGGACTTTTCTTCCTCAACATATGGTAAC
CACCCTGGATTTTTACACTCAAGAAACCGGACCACCCTGGATTTTTTATC
TTCCATATCACCCTGGACGTCACACCTCCCCCAACATAGGGGGTACACAC
TATTTCTGGAATAGCCAAATGCGTGTATACACCAAAGAAGAGTTGAACCA
GGGCTTTCTCAAAAATATTCACCCTCCCCTCGTTGAGGTCATGTCAAGGA
CTTGAAAAATGGTTCTTAATGCCTCTCTGCTGACTGTTCTGAAATAAAAA
AACCTATATCCAAGGGAAAAGAATGGCGTACTCTCTACATGTTTTTTTTA
TAAGCAAGTGTCTGCCCCTTGATCAGGCTCGTGTATGCATAAATTCTCAA
AGCATCCAGGCATAGCTTTTGCTAATTATATGCTTATGAATCATGCTTAT
CATTCACCCCGAGCCAACTTTTTAGTAAATTTTCAGAAACTTTGTAAACA
TTTGTTCAGATTTTGGGAGCAGTGGAATGTAGCTAGCCGTGGAATGTCTT
TATTTTTACTTGACCTCTACCAAACCTTTTTAAACATATAAGAAATGACA
ACTTGAAAAATATTCCAGGCTGACATATATGCTTATGTTCTGCTTACAAA
TTCTGCAAATACGAGTCTTAATATGCTTATAATCGTTATGCTTATGAAAA
AATGTACCTTCGGGTAGACATCTATCTACCTATATGAAAAAGGAGTCTTT
GGTCGCCCCCCCCTTACGTGTTGCAAACCTACTTCAACTATAGAGATTTC
TTCTTTTCAGCACAAAGAAAATTTGGAAGAGCAGAACAAGAAATTAAGCA
GTGAAAAAGAAATGAACAGCCTCATCGTCGAAGAGAAAGTCATCGAAAGC
AAGAAAATTAAAAAAGCTAACAGCTCGGTAAGAATGCTGTAGAAATTCGA
AATTTGTCATTCTCAGTGACCGTCCTTTTTGTTTTGTTTATTCGGCAATC
CCCTAAAATCAATAACGCGTTTTGAATTAAATTTTTTTGATTTTTGAAGA
AAATAATTAAAACTAAAACATAACAAAAAAGGACGCTTAGCTCTCGCTCT
TATTTAACCTGTTATTTGCCATATCTTAGTTAAAAGACCATTTCAAGACC
GATCCAATTTTCAAAATCTGGAAACTTATATTACCGGGAATATGATTTAT
TTTTGACGTATCTTTAATGTCATTTACTTTACAATTTTTCCTTTAATTTC
ATTTATAGTAAAACAAATTCAAAAAAAAATTACGATTTTGAATAATCTTG
ACATATTAACAGGCCTTTAAATGGCCAAAAATGCCAAAGAAACTTTTCTA
ATTTTTGCCTGTAGTGCGAATCAGGACCCCCAGAAGGGTTCGGCCAATTT
TGGACTTCGTCTATTTATTATTTGTATCCCATTTATAGCTTCAACAAAAA
GTTGATGACCTTGAGAAAGCATTGACAGAAGTGATGTCGGAGAATAATCA
AAAGAAAACATCCTTAGTTCAGAAACATAATCAAGAACAAGAGGGAAATA
AGTAAGTTGGAATTCTACATGGTACTATGTTACAGGGGTCATGTTACAGA
CTGTGGTGCAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTGGGTT
CAATCCCTAGCTTGGTCATACCAAAGATTCCAAAATGGTACTTGATGCCT
CTCTGCTTGATGCTCAGTAATTAAGATAAGGATCAAGGATGAGTGGAGCG
AGCCAGGGAAAAAGAGTGGCGCCCTCCCCTACCTTCGGGTAAATAGCTAT
CGAAAGAGGAGCTATCGGGTCGCCTCTGACAGCAGTCACAGACTTACTTA
AATTCTCGCATCGCTGAGATTTTTTAGATACACAATGCTTCTCGTGCTTG
TTCTGATTTTTTGCACAATTAAGTAAAATAGTAATTCCCAAAATATGATA
GAGGCCAATTTTCGATTAAAAATCTTTCCGGCCGCCAGAACCTGAAAAAG
CGGTTTTTCTGGATTTTCTCGAGATTTTATCTTTTTTTTTTCCTGACTTG
TTTATTTTGAATTTAATTTTTTTTGTTGAACAGACGGGTAGGTCCATTAA
AGTATCACTTTTTTCATTAATTTTTATTAATTAACTTTTACAGAATGGAA
ATAGCACGGCTACAACGTATCATTGAACTAAAGAATAAGGAGATGAGCCG
TGTCAAGAAACTTGCCAAAAACATCCTCGATCAGGTAAGACAATTAACTT
ATCATTTTCTTATTTGTATGGCTCTTAAAATCAGAGCTTGGCATGGGTTT
ACGGCAACACTGTTTTACCGACGAGTTCTTCGACAGGTTTTGAAGGATCC
TGTAAAGCCTCAACTCGTCGTAGTCATAGATTTATAAAGCCCGAAGGGCT
AGATGTCGTGCTTTGGCTGAAATGTGTTCAATATGCTGATGACACGACTA
TATATCGCCACACCAAACCAAACGAGCTTGAAAATTGTGTCACTGAAATG
AACTCTGATATTAGAGTAATTGAGAAATGGTCGCTGGATTCGAACTTGAT
ATTTAACGCCAGAAAAACTAAATCGATGCTCTTTGCCACATCTCAAATGG
CAAGGAGGCATGATTTTGAATTCGAAATCAAGTCAAATAACGAAAATGTG
ATTGAGCGTGTTCCCCTATTCAAGCTGTTGGGAATCATCTTCACCGAAAA
CCTAACATGGAATGAACATGTCAAAAAAATCGTCACTAAAGCATATGGTA
CGCTGAAGAGTCTATCACTCATCAAACGATATTTACCATACCGTGTACGA
CGCCAATTGGCAGAATCTCTTGTATTGAGTAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTGACTTTATTATATTTCTAGTTCTATGAAGTTTTTTTT
CTTTTCTATTTGATGTTTAATTAGTTTCAATTAATTTAATTTAGATAGTT
GATAGCTCACTGGTCGTGTTTTGCAAGGTCCAGTACACTTTTACACAGCC
TTCGGTTTGCAATCTATGCTAGTTTTGCTCATAATATCTTACGCTCTGTC
GTGATTCTATCTCACCGAGTTCTTAGATCTATTTTGTCGCTTACTTTATC
TCTAGCCATCAATAGTACTTGAGCCTTAGTCTAGTCTAGCTTATAACATT
ATGTTAGTATTTTTTTTTTAAATATATTCGTTAATTTTTTATAATAGCAC
ACATTGCGATGGCCTCAGCTAGCATACTCAGATACTCGGATTTGTTTAGG
TTTTAGTCTAGCTCTATCACTATTCACATTTTACCCCTCAATCCTAATCT
TTTATTCATCATACTAGCCCACCGCTTCGTCCCTATCTGTTTGTCTATAC
NTTACAGAATGGAAATAGCACGGCTACAACGTATCATTGAACTAAAGAAT
AAAGAGATGAGCCGTGTCAAGAAACTTGCCAAAAACATCCTCGATCAGGT
AAGACAATTAACTTATCATTTTCTTCTTTGTATGGCTCTTAAACTCAGAG
CTTGGCATGGGTTTACGACAACACTGTTTTACCGACGAGTTCTTCGACAG
GTTTTGAAGGATCCTGTAAAGCCTCAACTCGTCGTAGTCATAGATTTATA
AAGCCCGAAGGGCTAGATGTCGTGCTTTGGCTGAAATGTGTGCCGAGGTT
AGGTAGGATTCCTAACTGAAGTCTGTCTCAAAATAATTTGCAGCTGGAGA
CAAAAATGGCTGTAACTTTAGATAGAATACGAATCAAGTTGTGAGTGGAA
TATTATCAAGTAAAAAATTTGAGAAAAAAAAGGAAAATGAAAATGAAAAA
TGAAGAAGAAAAAAAATCAACTTCTTGTAGAAATGTGGTATAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCAATCAAAAGATATCAAACAAAGTTTATTGCTGGTTGATCGACAAAAGG
CTGTTTTTTGTCGTTTTTTACTACTTTATAGAGTCAACCAGCAATAAACT
TTATTTGATATCTTTTGATTGAATGAATATTTTTTTGAACCATTTACTTG
ATAATATTCCACTCACGAATATCTTTTTAACGAGCACAAAATCGCTACTT
GATTCGAATTCTATGAAAAGTTACAGCCATTTTTGTCTCCAGCTGCAAAT
TATTTTGAGACAGACTGTAGGTCACGTGACATTACAATAGAATTTCAGCG
CTTGACCAATCTTTGCAGGTTTTCGAAAACAATAGCAGCAATATTCTTTG
CCATATTCACTTTTTTTTTGCTTAAAGCACGACATCTAGCCCTTTGGGCT
TTACTGAAATCTGTAGTCGTTGTCTTGCTTTTCAATCAATCTTTTCATTG
AGTATTATTAAAAGTCCACTCCTTCTTCACTATTGCGTTGATGATGTATT
CGCATACAATAATAATCTCAATAATGCACGATAAAAAGCTGACATTTTTC
AATATATTAAGTTCTCTCTCTTTTTCTCTATATTAAGTTCAAAAGTGACA
ATGACCGGGGGGTAAATTTCCAAGAAATGTTATATCCTCCACCTCCACCC
CCCCCCCATATTCAAATTTTTTTCTGTATAAGCCCATTGCTGCTCATTAC
CGTGAAGACACCTAAAACGTCGCTTTTCTTGTGATACGTTTTTTTAAGAA
ACTAAGAAACCAAGCAGCCTCTCAATGTTTCTTAAGAAATCGGCTTTTTG
AGCCTTAAATGTTTCTTACATGTTTCTAAACTTTTTGACATAATCAGCCT
CGTGTTTCTTAAATTTTGCTTCTTTCAAAAAAAAAACCGAATTAAAAAAC
TTTATTTTCTCATTCTCAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTT
TTAAGGCATTCTGAGCCTCGTGTTTCTTAAAATTGTGTTTCTTTAAAAAA
AAAGTGTAGCTGTCGGTAACTTTTAAAATCTATTCATGGTAAGTTTGCAC
TCTTTTTTCTTTTACCTATAACTTTTGAAGGATTTCTTCAATCTTTATAA
ATTTGGTATGTATCTTTGGAGAGATATTTCTCAGTGAAACAATTCGAAAT
AAAAAATTCTTCAAAAAAATTCTAAAAATGAAAGATGAAAATAAGGAAGA
AAAAAATGAAGATCTTATGTAAAAGTGCTATAACTTTCATTTTCACTGGA
GAGATTCTTTGATCTTAGGAGGTCATCACTGTGAAGAAATTTCACTAAAA
TATTTATTCAATATAAAGTTATGATACAAAGTTAACAAGTGATTGACCCC
AAAAAACAAGATCTTCATTTTTTTCTTCTTCATTTTTATCTTCATTTTTA
TAATTTTTTTAAAGATATTTTTATTTCAAATTGTTCCACTCTCCGCACTC
TCCCACACAATCTTTCCAACGATACCAAATTTAAAAAGATTGAAGAATTC
CTTCAAAAGTTATAAGTAAAAGAAAAAAGAGTGCACACTTATCGTGAACA
GACTTTTAGTTTTGATTATTTCATTCCTCTACATACGTGTAATCAAAAGG
TCTTCAAAATCATCTTTTACAGCGTTCAGATGTCGAAAAATTCTTTATCG
AATCATTGGAAATGGTCAAAACTGAAATCATCAGAAATCGGTAACCGTAT
TTTTATTTTTCTGAATCAACTTTTTTTATAAGATTATTCAAAGATAACTT
AAAATAATTGTGGCTAGAATATTGATGGTCACACAATTATGATCATTGAA
TGATAAATAGAACGGTTATTTTCAATTGTAGACCCAAATTCAATTCAGTT
TTCGTAATTTAACACTGTTATTCAAGTGATAGACAGATTTTATTAGCGTG
TAATCAAATTTCAATATTGTATTTAATATATGTACGCTTAATTATCGTAT
CAGCTGATATAACAACGAAAGTGTTTTTCGATGTCGAAAGCTCCTTTTAC
ATAAGTCACGTTTTGTATCCCAGTTTGCAGTGCTGGAAAATTTACCACTA
GAAAGTTATCAAACGTGGCTTTTTACCGACAGGTTTCAAAAACACCAAAA
TTGTGTACGAAAGTAACCTTTGTTATACCTCTAACCTTTACACCACCCAG
GAACTAGAAATAATCATAAAAGTTATGAGGGAAACACCAAGGCTACGATT
AGCTCACAATAAAACCTTCCTGGGTATACGGTTAAACGCTTTTTCGATCT
ACGAAGGCAACGAAAATATCTTTTCTTTTATCATGACAGTTCTCTTGCAA
TTGCAGGAGGATAAAAACGCCATCAGTCGTGTCACGCACGGCCAGGCAAA
ATGCCGAATGCATATCATCAATTAATGATATTCATGACGTAATATTATGT
ACGGAAAGACCCCGGTTTTTGCCAGTAGTGGCAAATTTTATACAACTTTT
GTCTAGTTTAAATTTGCCACTACTGGCTGAAACCGAGGTATTTCCGTAGA
AAACATTACGTCATGAATATCATTAATTGAGATTAAATCTCTAACGTCGC
ATCTTAAAAATAAATAAATTTTGCTGTCATTCCTTCCCTGGAAACTAGAC
CCAATTCATTTGTAGTGTTTAGGATTAAGACCATGTTCAGACGCTACGGT
TCCGTTCCGGAACAAGTGCAAACGTCAAAATTCGGAGCGTCAAAAAAGAG
GACGTTACAAAGCAAAATATATCGAAACAGTTTCGCTCCACTTTTTTTAT
CGTAACGGAACTGCTCTGTTTTCTTGCTCCGAAACGTTCCGAAACCAATA
TGAACACATTCGATCCGTAACGCAAATCATACCGGAGCGAAACGGAACAG
TAACGTGTGAACATTGTGGAATAGATGTATTACTTCTTCGGAAAAGAAAT
CTTTAATGTTTTTTTTTCAGTGCGCAATATCGACGAGACGCTGAAGTAGC
ATACAATAAAAGAATGACCGAAGCACATTCTGGTCACTCTGATTATCCCA
AAGTCCGCACATTTCGTCATCTAAAGAACAGCACTAATTCCGTGTACGCA
GATCTACGCGCGGCCGAACGGTGGGATGGGTTTGACGCGTCGGTTGATCT
TTCAGAATTAACATGGGAACAGAGAGAACAGGTTCTTCGCTTGTTGTTCG
CTAAGATGAATGGCCAGAAAACGTGAGTTATAATTTGAATTCCGTAATTA
TTTTTCATGCTTTCGAACTTTTTAGGTGTGAAATTTTAACTTATGGGAAT
CTAGAAATCGGAGCTTTCTACCACGAAAATCGAAAAATTGAAAAATTTCA
AAAATCAGATTAAAAAAGATTTGCGTGATACAATGTCAAAATGTCTCACT
CTCAAGCTCAAGGCTTTATTTAAAGGCTTATTTTTTTAAGGAAAGTATTA
CTAAATATCTGCTATAATATTTCCTATAGATCAAAAGTCAGCAAAAGTAT
ACTTCCACCCATCAACAGTAAGATGGACGAAACTAAAGCTCATCAACCGA
AACCACCTTCCGTTCAAAAAGCTTTTCTCACGGAAGCCGATGATCCAAAA
GAGGGTGTCAGTAGTGATGCAAGTAGGGTATTTTCAGCCACTGAGATCCT
TGCTTTTACATGACTTTTATGACTTAGCAATTTTTAGGGTACTGATTATT
TGTAATTAATTTTTTTTGAAAAGTTGTATATAATAGTTTGTGTATAGATT
TAATCAGAATAGAATGTGATTTTATTTTATTACCTTGTAAAATAATTAAT
TTTTTAATGATGGTTTAATTTATTTTTTGGTAAAGACTGATTCAAGGAAA
AGTAATT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000328	XLOC_000328	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000002	supercontig	sc0000002:470542..486348 -

Expression

No biomaterial libraries express this feature.

Blast

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BLAST of TCONS_00000545 vs. Swiss-Prot (Human)
Match: BBOF1 (Basal body-orientation factor 1 OS=Homo sapiens GN=BBOF1 PE=2 SV=3)

HSP 1 Score: 337.806 bits (865), Expect = 1.615e-107
Identity = 192/477 (40.25%), Postives = 319/477 (66.88%), Query Frame = 2

Query:  143 NDDVLKQAIANACLWESRLGTVEVAKNEYRDTTRTLLHENEKLQTQVSQTEKETVDVLSFLRDEDIKKNNTINKLQLMIXXXXXXXXXXXQGFIDDYTKQIETLQTSLTDKTNEVKLMQSELKLVKEFRRKRALMQKEIDDIKDNLFMNEKQHENALEKIERKFFDEKIRMQQEANRKISELAERAHNEAISNLDDTTKSVYKENVRLNEALTYHIKAGEELSQHKENLEEQNKKLSSEKEMNSLXXXXXXXXXXXXXXANSSLQQKVDDLEKALTEVMSENNQKKTSLVQKHNQEQEGNKMEIARLQRIIELKNKEMSRVKKLAKNILDQRSDVEKFFIESLEMVKTEIIRNRAQYRRDAEVAYNKRMTEAHSGHSDYPKVRTFRHLKNSTNSVYADLRAAERWDGFDASVDLSELTWEQREQVLRLLFAKMNGQKTSKVSKSILPPIN----SKMDETKAHQPKPPSVQKAFLTE 1561
            ++ V+ +A ANA LWE+RL   E+++ +YRDT+R L   NE L+ +  + EK+ + VLS+L+ +D +K+N I KL+  + + K+  ++EK      YT+QI  L+     K  E+ ++ +ELK V++F++++  +++E+DD+K+NL   E+ H+  L ++E +FF+EK R++QEA +KI  LAERAH+EAI  L+D  ++V+KEN  L +AL YH+K  + L ++ + L+E +  L  +KE+N L+V+EK+++  + +    +LQ+KV +LE AL+ +  E   +   L Q    E +  ++EI +LQ ++++K++EM+RVKKLAKNILD+R++VE+FF+++L  VK +I+ +R  Y++ A+ A+N +M  A +G ++YPK+RTF   ++STNSV  DL  AE+W   + +VD+ +LTWEQ+E+VLRLLFAKMNG  + K ++S  PP+     S   ETK    +     K F+T+
Sbjct:   25 DESVVDRAKANASLWEARLEVTELSRIKYRDTSRILAKSNEDLKKKQCKMEKDIMSVLSYLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHTELKAVRQFQKRKIQVERELDDLKENLRNTERIHQETLRRLESRFFEEKHRLEQEAEKKIIMLAERAHHEAIVQLNDAGRNVFKENDYLQKALAYHLKETDALQKNSQKLQESHTLLLHQKEINDLLVKEKIMQLVQQRSQIQTLQKKVVNLETALSYMTKEFESEVLKLQQHAMIENQAGQVEIDKLQHLLQMKDREMNRVKKLAKNILDERTEVERFFLDALHQVKQQILISRKHYKQIAQAAFNLKMRAACTGRTEYPKIRTFDGREHSTNSVNQDLLEAEKWTHIEGNVDIGDLTWEQKEKVLRLLFAKMNGCPSRKYNQSSRPPVPDYVVSDSGETKEFGDESKLQDKIFITQ 501

The following BLAST results are available for this feature:

BLAST of TCONS_00000545 vs. Swiss-Prot (Human)

BLAST of TCONS_00000545 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

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POSITION

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Match Name	E-value	Identity	Description
BBOF1	1.615e-107	40.25	Basal body-orientation factor 1 OS=Homo sapiens GN...	[more]

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TCONS_00000545 (transcript) - C. hemisphaerica

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