TCONS_00000530 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000530
Unique NameTCONS_00000530
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000530 ID=TCONS_00000530|Name=TCONS_00000530|organism=Clytia hemisphaerica|type=transcript|length=105bp
GTCTGGAGTTACTATTCTTAAACCAAAAGATTCAAGGATCTGGTTGGCTC
CATATCAAATACCCTCAACCTCCAAAGACACAATTGAGTTGGTATAAGAT
CGAGG
Run BLAST on NCBI

transcript from alignment at sc0000002:390144..390655-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000530 ID=TCONS_00000530|Name=TCONS_00000530|organism=Clytia hemisphaerica|type=transcript|length=512bp|location=Sequence derived from alignment at sc0000002:390144..390655- (Clytia hemisphaerica)
GTCTGGAGTTACTATTCTTAAACCAAAAGATTCAAGGATCTGGTTGGCTC
CATATCAAATACCCTCGTGAGTTTTACTATATCATTGTTGTTATTTTTGC
CATCTGAAGTTAACAGTATGGAAAGTAAAAAGTAAGTTTGTGACCGTAGT
CGAGGGCGACCTGAAGGCTCTCTTTTCGTATAGCTGTCTACCCGAAGGTA
GGGGAGGGCGCTACTCCTTTCCCTGGATTTCTCCGCTCACCCTTAATTCG
TCTCTTTAGTTGCTGAGCATCAAGTAGAGAGGCATCAAGTACCATTTTGG
GAATCTTTAGTATGACCCGGCTGGGGATCGAACCCACAACCTTGCGCACC
GTAGCTGGATGCTCTATCTTCATGCTACGGTCGCACAGTATGGAAAAGCT
GTCCTTTAAAAGTGCAAAGATAAAGTTTGTTGAAAGAACTTTTTAAGAGG
CAAGTAATTTCTTTCATTTACAGAACCTCCAAAGACACAATTGAGTTGGT
ATAAGATCGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000323XLOC_000323Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000530-exon-sc0000002-1575043694:390590..390655TCONS_00000530-exon-sc0000002-1575043694:390590..390655Clytia hemisphaericaexon
TCONS_00000530-exon-sc0000002-1575043694:390144..390182TCONS_00000530-exon-sc0000002-1575043694:390144..390182Clytia hemisphaericaexon
TCONS_00000530-exon-sc0000002-1510915933:390590..390655TCONS_00000530-exon-sc0000002-1510915933:390590..390655Clytia hemisphaericaexon
TCONS_00000530-exon-sc0000002-1510915933:390144..390182TCONS_00000530-exon-sc0000002-1510915933:390144..390182Clytia hemisphaericaexon
TCONS_00000530-exon-sc0000002-1491911889:390590..390655TCONS_00000530-exon-sc0000002-1491911889:390590..390655Clytia hemisphaericaexon
TCONS_00000530-exon-sc0000002-1491911889:390144..390182TCONS_00000530-exon-sc0000002-1491911889:390144..390182Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:390144..390655 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000530 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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