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TCONS_00000529 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000529
Unique NameTCONS_00000529
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4253

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000529 ID=TCONS_00000529|Name=TCONS_00000529|organism=Clytia hemisphaerica|type=transcript|length=4253bp
agatgAGTAAAAAAAATGGTCATCGGTATTAGATAAAATAGCTACACACA
CACATACACAGACATACAGATTGAAATACTTCGTGAATGGTAGCCATGGT
AACCTAAACAATAAAGATAATGACAGAACATtggtttttaagttttctca
TTTTGAGTTTAGGATCTGTGGCCACACTCAAAACGATTCACATCTCGCAT
AATGGACAAAGCAAAGACAACAGCACGTGTGGCCAGATATCACAACCGTG
TTTTCATCTTGATTACGGAATCAACACCATCTCCATGGATACAAATATAA
TTTCATTGGATGCAAACTACAATTACAATTACAACAGAACCATTGAATTA
CCTCATAGTTTAACATTGACAAGTTACTATGACAACGAGGATGGACCACC
ACCAAAAGCATCCTTGAATATAACAATGGTGAATACCGATGAAAAAGTGA
TATTCAAAGCACGCGGAGATTTATCACTGTATAACTTAAACGTATCCGTC
AACGCTGAAAGCTTGGTATCCATCTTCCAAGTTcaaagtgacacttttca
aCATATTGAGATCCATGATTCTGAGATTTTTCTTATTGAGAGATCCGGGA
ACACTGATCTTCTAAGTTCTCCGTACAATGCGAATATaaaattcaacaaa
acaaaactcttTTATCACTTAATAGATCAAGATAATGTCAAACGAGTTAT
GACAACAAACCAGCAAAGCAGAGAAGCTTTGTTTCGGTATACAATGGCTA
CAAAACGTAACTCTACCCTTGTCTACGGGAAGAGATCCCGACACTTAAAA
CAAAAgctaaatgaaaaagttttgccTTCATCTGCAAAGCATAACCTACA
TTCAGAAGAAGGAAACCCCTCAGTCATTTCCCAACATCAGCCGCCAAGAG
AAATAGTATCAAACGAATTTACTAACATGCGTGACAACGATAAAGACTTT
AAATTCAGCAGAAGCGATGGAAAACAATTTACTACCACACCAGTCTATGA
CCAACTTATGACAACATACAGGATAAATTCTACTACTCACTACCGCAACA
AAGGTAGAACaggatttcaaaagaaaataacaattcaaatgtatgattca
gtttttcatgctgataGTTATATGggagatttcaaatttcaaattgagcC
TTTAGGTGAAGTCTCTGTTAACCTGTTCGTGTCAAACTGTTGTTTTACCC
AAGTTAAAATGAATATCTTCCCAACGGCACCGCCAACTAAGGTGGTTTTC
AAAGATAGCTTGTTTGAATCTACTGTTATATTTGTTGATTTCAGCCACGT
ACTATTTAAAACTGAGCAACTAGTAAACACTTTAAACATGGTAAATTGCA
CTGGAGACATATTGATATTTAGTGCAAACTTTGATGATGATTCAAATTGT
CAAATATCCGATTCCAATTTCACAAACTCAAAGTTTGATTTAACCAGCAT
GTTAATATACACTGAAGTCAAAGTCAGCGTTCACGTATGGAATTGTGTAT
TTTCAGAAGCCACTGTTGATCAACAACTAAAAGTTAGACTCCGTGGAAGC
TACAATGGTGCAGCTCCGCATAAAAATATCACGATCATGGACTCGTTCTT
CCAAAGATGTACTTATGGGGCACTTGTGGTGAGCGGATTTGCATTCAAAC
TAATCCGGACAAGATTTGCCGATAATTTTATTGACGGTCTTGATTACAAA
ACTGGAGTTTCAGCTGCACTCACTGTCCAATCCGACTCCATTGAAATTGA
GAACTGTACATTTATAAACAACACAGCTCCAAACGGCATTCCAAACTCGT
TAAAGACCGAATTTATATCAGggaaatattttcatatatcAAATACCCAC
TTTGAGTCAGGAAAAATCTCCATCGGAGATGTTAACAACGTCGCTTTTAT
ATCAGAGATCAATGTTGGGTATATATTTCAGAATGTATCATTTTACTGCG
CTAAACCAGACTATTATCTACTCATATACGGGGGAACAGAGCAATCCTTC
GAAGCTAAAATGATCACATGCACGCGATGCGGAAGGCTGACATACAACGC
ATTTGATCAATCACACGTCAATTACCATGGATGTTTGAAAAAGAGAGTCC
ACAATATCACATGCTATGCTTGTCCATATCAAGCCTCGTGCGGCAACGGA
ATCCAAAGTCGTGGCAACTACTGGGGAACATCAAATGCGACTGGATTTGT
TACTTTCTATCCATGTCCACCTTTTTATTGCTGCTCCTCGTTACGTACCT
GTTCATCCTATAACACCTGTGTAAACAACCGCCAAGGACGCCTATGTGGT
GCTTGCAAAGATGGCTACTCACTCAGCATTTTCAATAAGTGTGTACGCAC
TAAACATTGCAACTATAATTGGTTTTGGTTGGCGTATAGTATACTATGTG
TCTTGGCGTTTATTTTCTTCCTGTATTTCAAAGATGTTTTACGATTCATG
AAAATGAAACTTTGTGCTTTGTTCTGTAGTAGCAATGATGCTGATCTACC
ACAACCACAACAAAACAGAAATATAGAAGAATCACTAACTAATTCACCGA
CGCTGAGTACAAATACGGACGATCCTATAAACACCATTTCAAATAGCAGC
AATGCAGTAAACGTGTCGATGGACGGCGACAATGAAAGCATCGTAGCCAA
TAAAACTGCTCAACAACAACAAGGTACTTTCTCCGGTACTATCAAGATag
ctttctttttttatcaAGCAGCCTCAATCATCCGCATCAATGCATCTGCA
AAAGCAGAATACACAATCCCAATCATTCTTAATTTGATCACCTCGTTTTT
CAATATAAAGATCGATGATAGTTCATCCTCTGGCAGTTCCGCCATAGACT
TTTGTCCACTCCAAACATCTAATACCACAGTCATCAAGGTCATCAGCTTA
AGCACTATTCTTTCATGTTGGCTCCTGTTTCTTGCGGCTATTTTGATTAC
ATACGTATATCGACATATCAAGAATCGTTTTTGCCAACGACAGCCAATTG
ACCAAAACGAGGCTCATGACCATGGAGAGCAATCACACAGCCTTGCATCT
CGTTTTATAAACAGATTAAAAGGTAGCTATGTGCAGTTGCTCTTGTTCGC
TTATGCCAGCATTGCAAAGTTCTGTTTGCAGGCCGTGCACTGCATCGAGA
TTAACGGTCATAAATATCTATACTACCAAGCTGAGCAGAAATGCTACCAA
GGATGGCAAATGCTCGTATTCGGGATCATATTCTCGTGGGTTGTTCCGTT
CCCATTCGTCTTGTATTTTGCATGTCGATGGTTGAGAGACAGATCGATCA
GCGCTAATGGTTTCTTGATTATGGTGACATTTCCACCGGCTATGTTAGTG
TATGTTTCAATGTCGATGATGTTAAGATGTTGCAACAGTTTTAAACATAC
CAGATTATTGCCTGCTGTTGATAATGATCAGTCGAATATAGAAAGAGAAA
GTATTTTACTGGTTTTGAACGAACCATTCCGCGTAAATGTTACGACAGAG
GAAGAAGACACCGAGACAGACGAAACTCAAGAGGATGACAACAATCAATT
AATTTGGGAACCAGTTCTTATCCTACGTCGATTGGTTTTGACCATATCAG
CAACGTTCTTTATGTCACCAGTTCAGAAACTTTATCCTGCTGCTTTGCTG
TTAATAGTATATACTCTGCATGATCATTTGAAGCAACCTTACAGTGATAA
ACGATTGAATCTGGCTCATTTGGTATCCATGCTGTTGTTGGTTATCCTAG
TTATGATTAACACGTTCTGGGCATATTCCGataatattgatttgattcaa
gATCGACAATTCTACTTGATGGGCAGTGTTCTCTTGTATTTTGAACTTTT
CATAATGTTGGCTCCAGTTTTATTGGTTGTACTCTATGGGATTGTTAAAT
TGGGGCGGTTCGTTTACAAAcgttattttcttaaaaaacaagACTGATTA
TTTGTTGttgtaaagtctgtctcaatataatctgcagcggagacgaaaaa
ggctgtaactcttgatagaaCTCGAATTAAACAGCGGTTTTGtacttgtt
gaaaagatattcaaggGTGGAATATTACcatacagaaaaaaatgaaaaat
gaagatgaaaaatgaagaagaagtaTACCAACTTTATAAAAGTCAGTGCT
ATAATTACTGTTATCACAAcagtgattctttgatcttagaacatcatcac
tgtgaagactAAAGTATATCACTGATTGactttaaaaatcatcaaaaaac
aac
Run BLAST on NCBI

protein sequence of TCONS_00000529-protein

>TCONS_00000529-protein ID=TCONS_00000529-protein|Name=TCONS_00000529-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1275bp
MTEHWFLSFLILSLGSVATLKTIHISHNGQSKDNSTCGQISQPCFHLDYG
INTISMDTNIISLDANYNYNYNRTIELPHSLTLTSYYDNEDGPPPKASLN
ITMVNTDEKVIFKARGDLSLYNLNVSVNAESLVSIFQVQSDTFQHIEIHD
SEIFLIERSGNTDLLSSPYNANIKFNKTKLFYHLIDQDNVKRVMTTNQQS
REALFRYTMATKRNSTLVYGKRSRHLKQKLNEKVLPSSAKHNLHSEEGNP
SVISQHQPPREIVSNEFTNMRDNDKDFKFSRSDGKQFTTTPVYDQLMTTY
RINSTTHYRNKGRTGFQKKITIQMYDSVFHADSYMGDFKFQIEPLGEVSV
NLFVSNCCFTQVKMNIFPTAPPTKVVFKDSLFESTVIFVDFSHVLFKTEQ
LVNTLNMVNCTGDILIFSANFDDDSNCQISDSNFTNSKFDLTSMLIYTEV
KVSVHVWNCVFSEATVDQQLKVRLRGSYNGAAPHKNITIMDSFFQRCTYG
ALVVSGFAFKLIRTRFADNFIDGLDYKTGVSAALTVQSDSIEIENCTFIN
NTAPNGIPNSLKTEFISGKYFHISNTHFESGKISIGDVNNVAFISEINVG
YIFQNVSFYCAKPDYYLLIYGGTEQSFEAKMITCTRCGRLTYNAFDQSHV
NYHGCLKKRVHNITCYACPYQASCGNGIQSRGNYWGTSNATGFVTFYPCP
PFYCCSSLRTCSSYNTCVNNRQGRLCGACKDGYSLSIFNKCVRTKHCNYN
WFWLAYSILCVLAFIFFLYFKDVLRFMKMKLCALFCSSNDADLPQPQQNR
NIEESLTNSPTLSTNTDDPINTISNSSNAVNVSMDGDNESIVANKTAQQQ
QGTFSGTIKIAFFFYQAASIIRINASAKAEYTIPIILNLITSFFNIKIDD
SSSSGSSAIDFCPLQTSNTTVIKVISLSTILSCWLLFLAAILITYVYRHI
KNRFCQRQPIDQNEAHDHGEQSHSLASRFINRLKGSYVQLLLFAYASIAK
FCLQAVHCIEINGHKYLYYQAEQKCYQGWQMLVFGIIFSWVVPFPFVLYF
ACRWLRDRSISANGFLIMVTFPPAMLVYVSMSMMLRCCNSFKHTRLLPAV
DNDQSNIERESILLVLNEPFRVNVTTEEEDTETDETQEDDNNQLIWEPVL
ILRRLVLTISATFFMSPVQKLYPAALLLIVYTLHDHLKQPYSDKRLNLAH
LVSMLLLVILVMINTFWAYSDNIDLIQDRQFYLMGSVLLYFELFIMLAPV
LLVVLYGIVKLGRFVYKRYFLKKQD
Run BLAST on NCBI

transcript from alignment at sc0000002:373628..380611-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000529 ID=TCONS_00000529|Name=TCONS_00000529|organism=Clytia hemisphaerica|type=transcript|length=6984bp|location=Sequence derived from alignment at sc0000002:373628..380611- (Clytia hemisphaerica)
AGATGAGTAAAAAAAATGGTCATCGGTATTAGATAAAATAGCTACACACA CACATACACAGACATACAGATTGAAATACTTCGTGAATGGTAGCCATGGT AACCTAAACAATAAAGATAATGACAGAACATTGGTTTTTAAGTTTTCTCA TTTTGAGTTTAGGTAAGATTTCACTAATTTTTTTATTCGTTTTCAATTCA TTTGTCATATTTCTAAATCTACTTAATAGCCAGATAATTTGTTGCGGCAA TGTAATTTTTTTGCGTGCTTATCATGAGTCGTTAAAATGAACATAAACTA CTCAGGCGTGTTGCAGCACATCCGGTTAAATTTGTCAAATTTTACCGGAA CGTTTCCTCATCGTAAAGAGGCGTTCTAAAATATTCAAAGACTATCGAAA ACTCCTCTTAGCCCTATTATTATTATCAAGCTTTTTGGGTGTTCCTATTA TCAAAGAGGGTGTTTTCCACCACCCGCCTTCAATAGCTTTTGATCTAGAG ACCCACTTTTGAGGGCTGAAACTTTTGATCCAAGAAATATATGAAAAATC TGAATACATATTTGAAATAAGGGAAATTCGAAAAATAAGAAAAGCGTAAA TTGAAGATTTTTGTGCCTGTAGATAAAATGTTAATTTTTTTCTTCTTTAT TTTTATCTTTATTTTCAAAATTTTAAAAAGATTTTAAAACCTAAAAATAT TCTGCTTATAATTATCTTTCCAACGGGGTATTATTTTTCATAATGTCTTT TTTCCTTCAAGAGCGATGAATGAAAATGTGCAGACTCTAAGGGCTCTGAC CATAGTCAGAAAATCGGTTACAGTATGTGATATGAAAATAAAACTTTTGT TTCAGGTTCCTTGACATTTTTAACATAAAATACCTTCACAAATTGTTTGT TAATTTACTATGTGAAGAGTAATTAATAATTTAATTACAAAAATGACGTT ATGAACTTTAAAAAGACGTTAATAAAATGTCATAATATACCCTCTTTTAC AAAAAATGCTAAGTTTTAATGGGTAATCAACCTATTTTGTTTCGAATTGT TTTTAATTGTCCGCAAAGAATTGCACTGTTTGAAATTTTGCGGAAATATT TTCTTGATTGATGTATCAAAAGATATGAGTGTATTTGTATGAAATATTTC GAAGAAAATCGGGCAAAAACCACTATTTTCAAGATTTTGAAACAAAGAAG CTTTTACAAAAATTTTCCGCAAATCTCTTTTTAGTTTGGGTAAAGATGAG TCTGCTAAATGACGCGCCTTACGCGCCCACGCGCCCTCATATTTTTAACG CACCTTACGCGCCTCACACGCCCACGCGCCCTAAAATGTTACGCGCCCTG GTAATTTGACACGCCCTAAAAATTTGACGCGCCCTAAAATATCGACGCGC CCTAAAAAATCGACGCGCCCTGATAATTTGACACTACCTAAGTAACTGAC AGTAATGAGAACAATTACTTCGACTTTATTGATTTATCCTTCATATTCAA ACGTCGGGTGAGTGTCTTATAAAGAATGTTGTTCTTATCCCAGTGTCGTC GTTCTATGAGCGATTGAGGATACAAACCTTTTTCCCGAGTATTTTATTAC CAAGCCATAATTCGTGTTTTCAGTACATGATTTTTTTCTACGCCACTGCA GTAATCAAATTATTATTTTAAATCACTCTTTTCCAAATTGAGATGTAAAT TTAACAAAGACAGCGACAATGGAAAACGTTTCACAAATTCCCAAGTCAAA GATGATTACAAAAAGTTGGGTTTTCTGTGAAGGGACAAATTTGTGCATTC CCCCCTGTAAATTGAATAGAAATAACGTGTAGCATGCACAAATTCTATGA AATAGACTAATAAAGCGTACATAAATAAAGTGTACAGCCGATAAATGGAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNCAAAACCGTCGAAAACTTAAGGCACATCAAAACCCTAGGG CGTGTCGAAATCTTAGGGCGCGTCAAATTTTCAAGGCGCGTCGAAATCAT AGGGCGTGTCAAATTTTCAAGGCGCGTCGAAATCATAGGACGCGTCAAAT TTTCAAGGCGCGTCAGGCGCGAAGGCGCGTTAGAAATATGAGAGGGCGCG TGGGCGCGTAAGGCGCGTCATTTAGCAGACTCGGGTAAAGGTACACCACC TAGCCCAAAACATTCTTCAAAATGTATTTCTTCGCCGAAAATAAGGTCCT CGAAGTTGAAATACTCTCCTTCGCAAAAGTCCTCATTTTCTTCTTCATGG ATTTTTTTCATTTCGATTTTCAAAATTTCAGATAACATGTCATAGTTTTG TTAGCTACTTCAGGCAGAACCTTACATTTTGTACATGGCAAACATGAAAA ATTCACTATGGTCAGAGCCCTTGATTATATTAAAAGTCAAAAAGATTCAG AGTCTCAATAAAGATTTTCAGTGAGCTATTAGCAAAAGAAACGCTAGGGT GGTGGAAAACACTCCCTGGTAAAGATAGGGTTAAAACTTAAAAAACACAA CACAAAAAAAACTCCATAGCATGCTTTCGATACAAGTCCAAACAGATATA ATGGCAAAACATCTTTTGTCGATTTTTCGTTCTTTATAAAAGTAAAAGGT ACATTTATTCGTGCTATTGCGTAATCAGCTAACCTTCAACGCCCTCGATA GCCCAACAGTATACTTTAAAAATAAATAAATTTCTTTTTATAGGATCTGT GGCCACACTCAAAACGATTCACATCTCGCATAATGGACAAAGCAAAGACA ACAGCACGTGTGGCCAGATATCACAACCGTGTTTTCATCTTGATTACGGA ATCAACACCATCTCCATGGATACAAATATAATTTCATTGGATGCAAACTA CAATTACAATTACAACAGAACCATTGAATTACCTCATAGTTTAACATTGA CAAGTTACTATGACAACGAGGATGGACCACCACCAAAAGCATCCTTGAAT ATAACAATGGTGAATACCGATGAAAAAGTGATATTCAAAGCACGCGGAGA TTTATCACTGTATAACTTAAACGTATCCGTCAACGCTGAAAGCTTGGTAT CCATCTTCCAAGTTCAAAGTGACACTTTTCAACATATTGAGATCCATGAT TCTGAGATTTTTCTTATTGAGAGATCCGGGAACACTGATCTTCTAAGTTC TCCGTACAATGCGAATATAAAATTCAACAAAACAAAACTCTTTTATCACT TAATAGATCAAGATAATGTCAAACGAGTTATGACAACAAACCAGCAAAGC AGAGAAGCTTTGTTTCGGTATACAATGGCTACAAAACGTAACTCTACCCT TGTCTACGGGAAGAGATCCCGACACTTAAAACAAAAGCTAAATGAAAAAG TTTTGCCTTCATCTGCAAAGCATAACCTACATTCAGAAGAAGGAAACCCC TCAGTCATTTCCCAACATCAGCCGCCAAGAGAAATAGTATCAAACGAATT TACTAACATGCGTGACAACGATAAAGACTTTAAATTCAGCAGAAGCGATG GAAAACAATTTACTACCACACCAGTCTATGACCAACTTATGACAACATAC AGGATAAATTCTACTACTCACTACCGCAACAAAGGTAGAACAGGATTTCA AAAGAAAATAACAATTCAAATGTATGATTCAGTTTTTCATGCTGATAGTT ATATGGGAGATTTCAAATTTCAAATTGAGCCTTTAGGTGAAGTCTCTGTT AACCTGTTCGTGTCAAACTGTTGTTTTACCCAAGTTAAAATGAATATCTT CCCAACGGCACCGCCAACTAAGGTGGTTTTCAAAGATAGCTTGTTTGAAT CTACTGTTATATTTGTTGATTTCAGCCACGTACTATTTAAAACTGAGCAA CTAGTAAACACTTTAAACATGGTAAATTGCACTGGAGACATATTGATATT TAGTGCAAACTTTGATGATGATTCAAATTGTCAAATATCCGATTCCAATT TCACAAACTCAAAGTTTGATTTAACCAGCATGTTAATATACACTGAAGTC AAAGTCAGCGTTCACGTATGGAATTGTGTATTTTCAGAAGCCACTGTTGA TCAACAACTAAAAGTTAGACTCCGTGGAAGCTACAATGGTGCAGCTCCGC ATAAAAATATCACGATCATGGACTCGTTCTTCCAAAGATGTACTTATGGG GCACTTGTGGTGAGCGGATTTGCATTCAAACTAATCCGGACAAGATTTGC CGATAATTTTATTGACGGTCTTGATTACAAAACTGGAGTTTCAGCTGCAC TCACTGTCCAATCCGACTCCATTGAAATTGAGAACTGTACATTTATAAAC AACACAGCTCCAAACGGCATTCCAAACTCGTTAAAGACCGAATTTATATC AGGGAAATATTTTCATATATCAAATACCCACTTTGAGTCAGGAAAAATCT CCATCGGAGATGTTAACAACGTCGCTTTTATATCAGAGATCAATGTTGGG TATATATTTCAGAATGTATCATTTTACTGCGCTAAACCAGACTATTATCT ACTCATATACGGGGGAACAGAGCAATCCTTCGAAGCTAAAATGATCACAT GCACGCGATGCGGAAGGCTGACATACAACGCATTTGATCAATCACACGTC AATTACCATGGATGTTTGAAAAAGAGAGTCCACAATATCACATGCTATGC TTGTCCATATCAAGCCTCGTGCGGCAACGGAATCCAAAGTCGTGGCAACT ACTGGGGAACATCAAATGCGACTGGATTTGTTACTTTCTATCCATGTCCA CCTTTTTATTGCTGCTCCTCGTTACGTACCTGTTCATCCTATAACACCTG TGTAAACAACCGCCAAGGACGCCTATGTGGTGCTTGCAAAGATGGCTACT CACTCAGCATTTTCAATAAGTGTGTACGCACTAAACATTGCAACTATAAT TGGTTTTGGTTGGCGTATAGTATACTATGTGTCTTGGCGTTTATTTTCTT CCTGTATTTCAAAGATGTTTTACGATTCATGAAAATGAAACTTTGTGCTT TGTTCTGTAGTAGCAATGATGCTGATCTACCACAACCACAACAAAACAGA AATATAGAAGAATCACTAACTAATTCACCGACGCTGAGTACAAATACGGA CGATCCTATAAACACCATTTCAAATAGCAGCAATGCAGTAAACGTGTCGA TGGACGGCGACAATGAAAGCATCGTAGCCAATAAAACTGCTCAACAACAA CAAGGTACTTTCTCCGGTACTATCAAGATAGCTTTCTTTTTTTATCAAGC AGCCTCAATCATCCGCATCAATGCATCTGCAAAAGCAGAATACACAATCC CAATCATTCTTAATTTGATCACCTCGTTTTTCAATATAAAGATCGATGAT AGTTCATCCTCTGGCAGTTCCGCCATAGACTTTTGTCCACTCCAAACATC TAATACCACAGTCATCAAGGTCATCAGCTTAAGCACTATTCTTTCATGTT GGCTCCTGTTTCTTGCGGCTATTTTGATTACATACGTATATCGACATATC AAGAATCGTTTTTGCCAACGACAGCCAATTGACCAAAACGAGGCTCATGA CCATGGAGAGCAATCACACAGCCTTGCATCTCGTTTTATAAACAGATTAA AAGGTAGCTATGTGCAGTTGCTCTTGTTCGCTTATGCCAGCATTGCAAAG TTCTGTTTGCAGGCCGTGCACTGCATCGAGATTAACGGTCATAAATATCT ATACTACCAAGCTGAGCAGAAATGCTACCAAGGATGGCAAATGCTCGTAT TCGGGATCATATTCTCGTGGGTTGTTCCGTTCCCATTCGTCTTGTATTTT GCATGTCGATGGTTGAGAGACAGATCGATCAGCGCTAATGGTTTCTTGAT TATGGTGACATTTCCACCGGCTATGTTAGTGTATGTTTCAATGTCGATGA TGTTAAGATGTTGCAACAGTTTTAAACATACCAGATTATTGCCTGCTGTT GATAATGATCAGTCGAATATAGAAAGAGAAAGTATTTTACTGGTTTTGAA CGAACCATTCCGCGTAAATGTTACGACAGAGGAAGAAGACACCGAGACAG ACGAAACTCAAGAGGATGACAACAATCAATTAATTTGGGAACCAGTTCTT ATCCTACGTCGATTGGTTTTGACCATATCAGCAACGTTCTTTATGTCACC AGTTCAGAAACTTTATCCTGCTGCTTTGCTGTTAATAGTATATACTCTGC ATGATCATTTGAAGCAACCTTACAGTGATAAACGATTGAATCTGGCTCAT TTGGTATCCATGCTGTTGTTGGTTATCCTAGTTATGATTAACACGTTCTG GGCATATTCCGATAATATTGATTTGATTCAAGATCGACAATTCTACTTGA TGGGCAGTGTTCTCTTGTATTTTGAACTTTTCATAATGTTGGCTCCAGTT TTATTGGTTGTACTCTATGGGATTGTTAAATTGGGGCGGTTCGTTTACAA ACGTTATTTTCTTAAAAAACAAGACTGATTATTTGTTGTTGTAAAGTCTG TCTCAATATAATCTGCAGCGGAGACGAAAAAGGCTGTAACTCTTGATAGA ACTCGAATTAAACAGCGGTTTTGTACTTGTTGAAAAGATATTCAAGGGTG GAATATTACCATACAGAAAAAAATGAAAAATGAAGATGAAAAATGAAGAA GAAGTATACCAACTTTATAAAAGTCAGTGCTATAATTACTGTTATCACAA CAGTGATTCTTTGATCTTAGAACATCATCACTGTGAAGACTAAAGTATAT CACTGATTGACTTTAAAAATCATCAAAAAACAAC

Coding sequence (CDS) from alignment at sc0000002:373628..380611-

>TCONS_00000529 ID=TCONS_00000529|Name=TCONS_00000529|organism=Clytia hemisphaerica|type=CDS|length=7656bp|location=Sequence derived from alignment at sc0000002:373628..380611- (Clytia hemisphaerica)
GATCTGTGGCCACACTCAAAACGATTCACATCTCGCATAATGGACAAAGC
AAAGACAACAGCACGTGTGGCCAGATATCACAACCGTGTTTTCATCTTGA
TTACGGAATCAACACCATCTCCATGGATACAAATATAATTTCATTGGATG
CAAACTACAATTACAATTACAACAGAACCATTGAATTACCTCATAGTTTA
ACATTGACAAGTTACTATGACAACGAGGATGGACCACCACCAAAAGCATC
CTTGAATATAACAATGGTGAATACCGATGAAAAAGTGATATTCAAAGCAC
GCGGAGATTTATCACTGTATAACTTAAACGTATCCGTCAACGCTGAAAGC
TTGGTATCCATCTTCCAAGTTCAAAGTGACACTTTTCAACATATTGAGAT
CCATGATTCTGAGATTTTTCTTATTGAGAGATCCGGGAACACTGATCTTC
TAAGTTCTCCGTACAATGCGAATATAAAATTCAACAAAACAAAACTCTTT
TATCACTTAATAGATCAAGATAATGTCAAACGAGTTATGACAACAAACCA
GCAAAGCAGAGAAGCTTTGTTTCGGTATACAATGGCTACAAAACGTAACT
CTACCCTTGTCTACGGGAAGAGATCCCGACACTTAAAACAAAAGCTAAAT
GAAAAAGTTTTGCCTTCATCTGCAAAGCATAACCTACATTCAGAAGAAGG
AAACCCCTCAGTCATTTCCCAACATCAGCCGCCAAGAGAAATAGTATCAA
ACGAATTTACTAACATGCGTGACAACGATAAAGACTTTAAATTCAGCAGA
AGCGATGGAAAACAATTTACTACCACACCAGTCTATGACCAACTTATGAC
AACATACAGGATAAATTCTACTACTCACTACCGCAACAAAGGTAGAACAG
GATTTCAAAAGAAAATAACAATTCAAATGTATGATTCAGTTTTTCATGCT
GATAGTTATATGGGAGATTTCAAATTTCAAATTGAGCCTTTAGGTGAAGT
CTCTGTTAACCTGTTCGTGTCAAACTGTTGTTTTACCCAAGTTAAAATGA
ATATCTTCCCAACGGCACCGCCAACTAAGGTGGTTTTCAAAGATAGCTTG
TTTGAATCTACTGTTATATTTGTTGATTTCAGCCACGTACTATTTAAAAC
TGAGCAACTAGTAAACACTTTAAACATGGTAAATTGCACTGGAGACATAT
TGATATTTAGTGCAAACTTTGATGATGATTCAAATTGTCAAATATCCGAT
TCCAATTTCACAAACTCAAAGTTTGATTTAACCAGCATGTTAATATACAC
TGAAGTCAAAGTCAGCGTTCACGTATGGAATTGTGTATTTTCAGAAGCCA
CTGTTGATCAACAACTAAAAGTTAGACTCCGTGGAAGCTACAATGGTGCA
GCTCCGCATAAAAATATCACGATCATGGACTCGTTCTTCCAAAGATGTAC
TTATGGGGCACTTGTGGTGAGCGGATTTGCATTCAAACTAATCCGGACAA
GATTTGCCGATAATTTTATTGACGGTCTTGATTACAAAACTGGAGTTTCA
GCTGCACTCACTGTCCAATCCGACTCCATTGAAATTGAGAACTGTACATT
TATAAACAACACAGCTCCAAACGGCATTCCAAACTCGTTAAAGACCGAAT
TTATATCAGGGAAATATTTTCATATATCAAATACCCACTTTGAGTCAGGA
AAAATCTCCATCGGAGATGTTAACAACGTCGCTTTTATATCAGAGATCAA
TGTTGGGTATATATTTCAGAATGTATCATTTTACTGCGCTAAACCAGACT
ATTATCTACTCATATACGGGGGAACAGAGCAATCCTTCGAAGCTAAAATG
ATCACATGCACGCGATGCGGAAGGCTGACATACAACGCATTTGATCAATC
ACACGTCAATTACCATGGATGTTTGAAAAAGAGAGTCCACAATATCACAT
GCTATGCTTGTCCATATCAAGCCTCGTGCGGCAACGGAATCCAAAGTCGT
GGCAACTACTGGGGAACATCAAATGCGACTGGATTTGTTACTTTCTATCC
ATGTCCACCTTTTTATTGCTGCTCCTCGTTACGTACCTGTTCATCCTATA
ACACCTGTGTAAACAACCGCCAAGGACGCCTATGTGGTGCTTGCAAAGAT
GGCTACTCACTCAGCATTTTCAATAAGTGTGTACGCACTAAACATTGCAA
CTATAATTGGTTTTGGTTGGCGTATAGTATACTATGTGTCTTGGCGTTTA
TTTTCTTCCTGTATTTCAAAGATGTTTTACGATTCATGAAAATGAAACTT
TGTGCTTTGTTCTGTAGTAGCAATGATGCTGATCTACCACAACCACAACA
AAACAGAAATATAGAAGAATCACTAACTAATTCACCGACGCTGAGTACAA
ATACGGACGATCCTATAAACACCATTTCAAATAGCAGCAATGCAGTAAAC
GTGTCGATGGACGGCGACAATGAAAGCATCGTAGCCAATAAAACTGCTCA
ACAACAACAAGGTACTTTCTCCGGTACTATCAAGATAGCTTTCTTTTTTT
ATCAAGCAGCCTCAATCATCCGCATCAATGCATCTGCAAAAGCAGAATAC
ACAATCCCAATCATTCTTAATTTGATCACCTCGTTTTTCAATATAAAGAT
CGATGATAGTTCATCCTCTGGCAGTTCCGCCATAGACTTTTGTCCACTCC
AAACATCTAATACCACAGTCATCAAGGTCATCAGCTTAAGCACTATTCTT
TCATGTTGGCTCCTGTTTCTTGCGGCTATTTTGATTACATACGTATATCG
ACATATCAAGAATCGTTTTTGCCAACGACAGCCAATTGACCAAAACGAGG
CTCATGACCATGGAGAGCAATCACACAGCCTTGCATCTCGTTTTATAAAC
AGATTAAAAGGTAGCTATGTGCAGTTGCTCTTGTTCGCTTATGCCAGCAT
TGCAAAGTTCTGTTTGCAGGCCGTGCACTGCATCGAGATTAACGGTCATA
AATATCTATACTACCAAGCTGAGCAGAAATGCTACCAAGGATGGCAAATG
CTCGTATTCGGGATCATATTCTCGTGGGTTGTTCCGTTCCCATTCGTCTT
GTATTTTGCATGTCGATGGTTGAGAGACAGATCGATCAGCGCTAATGGTT
TCTTGATTATGGTGACATTTCCACCGGCTATGTTAGTGTATGTTTCAATG
TCGATGATGTTAAGATGTTGCAACAGTTTTAAACATACCAGATTATTGCC
TGCTGTTGATAATGATCAGTCGAATATAGAAAGAGAAAGTATTTTACTGG
TTTTGAACGAACCATTCCGCGTAAATGTTACGACAGAGGAAGAAGACACC
GAGACAGACGAAACTCAAGAGGATGACAACAATCAATTAATTTGGGAACC
AGTTCTTATCCTACGTCGATTGGTTTTGACCATATCAGCAACGTTCTTTA
TGTCACCAGTTCAGAAACTTTATCCTGCTGCTTTGCTGTTAATAGTATAT
ACTCTGCATGATCATTTGAAGCAACCTTACAGTGATAAACGATTGAATCT
GGCTCATTTGGTATCCATGCTGTTGTTGGTTATCCTAGTTATGATTAACA
CGTTCTGGGCATATTCCGATAATATTGATTTGATTCAAGATCGACAATTC
TACTTGATGGGCAGTGTTCTCTTGTATTTTGAACTTTTCATAATGTTGGC
TCCAGTTTTATTGGTTGTACTCTATGGGATTGTTAAATTGGGGCGGTTCG
TTTACAAACGTTATTTTCTTAAAAAACAAGACTGAATGACAGAACATTGG
TTTTTAAGTTTTCTCATTTTGAGTTTAGGATCTGTGGCCACACTCAAAAC
GATTCACATCTCGCATAATGGACAAAGCAAAGACAACAGCACGTGTGGCC
AGATATCACAACCGTGTTTTCATCTTGATTACGGAATCAACACCATCTCC
ATGGATACAAATATAATTTCATTGGATGCAAACTACAATTACAATTACAA
CAGAACCATTGAATTACCTCATAGTTTAACATTGACAAGTTACTATGACA
ACGAGGATGGACCACCACCAAAAGCATCCTTGAATATAACAATGGTGAAT
ACCGATGAAAAAGTGATATTCAAAGCACGCGGAGATTTATCACTGTATAA
CTTAAACGTATCCGTCAACGCTGAAAGCTTGGTATCCATCTTCCAAGTTC
AAAGTGACACTTTTCAACATATTGAGATCCATGATTCTGAGATTTTTCTT
ATTGAGAGATCCGGGAACACTGATCTTCTAAGTTCTCCGTACAATGCGAA
TATAAAATTCAACAAAACAAAACTCTTTTATCACTTAATAGATCAAGATA
ATGTCAAACGAGTTATGACAACAAACCAGCAAAGCAGAGAAGCTTTGTTT
CGGTATACAATGGCTACAAAACGTAACTCTACCCTTGTCTACGGGAAGAG
ATCCCGACACTTAAAACAAAAGCTAAATGAAAAAGTTTTGCCTTCATCTG
CAAAGCATAACCTACATTCAGAAGAAGGAAACCCCTCAGTCATTTCCCAA
CATCAGCCGCCAAGAGAAATAGTATCAAACGAATTTACTAACATGCGTGA
CAACGATAAAGACTTTAAATTCAGCAGAAGCGATGGAAAACAATTTACTA
CCACACCAGTCTATGACCAACTTATGACAACATACAGGATAAATTCTACT
ACTCACTACCGCAACAAAGGTAGAACAGGATTTCAAAAGAAAATAACAAT
TCAAATGTATGATTCAGTTTTTCATGCTGATAGTTATATGGGAGATTTCA
AATTTCAAATTGAGCCTTTAGGTGAAGTCTCTGTTAACCTGTTCGTGTCA
AACTGTTGTTTTACCCAAGTTAAAATGAATATCTTCCCAACGGCACCGCC
AACTAAGGTGGTTTTCAAAGATAGCTTGTTTGAATCTACTGTTATATTTG
TTGATTTCAGCCACGTACTATTTAAAACTGAGCAACTAGTAAACACTTTA
AACATGGTAAATTGCACTGGAGACATATTGATATTTAGTGCAAACTTTGA
TGATGATTCAAATTGTCAAATATCCGATTCCAATTTCACAAACTCAAAGT
TTGATTTAACCAGCATGTTAATATACACTGAAGTCAAAGTCAGCGTTCAC
GTATGGAATTGTGTATTTTCAGAAGCCACTGTTGATCAACAACTAAAAGT
TAGACTCCGTGGAAGCTACAATGGTGCAGCTCCGCATAAAAATATCACGA
TCATGGACTCGTTCTTCCAAAGATGTACTTATGGGGCACTTGTGGTGAGC
GGATTTGCATTCAAACTAATCCGGACAAGATTTGCCGATAATTTTATTGA
CGGTCTTGATTACAAAACTGGAGTTTCAGCTGCACTCACTGTCCAATCCG
ACTCCATTGAAATTGAGAACTGTACATTTATAAACAACACAGCTCCAAAC
GGCATTCCAAACTCGTTAAAGACCGAATTTATATCAGGGAAATATTTTCA
TATATCAAATACCCACTTTGAGTCAGGAAAAATCTCCATCGGAGATGTTA
ACAACGTCGCTTTTATATCAGAGATCAATGTTGGGTATATATTTCAGAAT
GTATCATTTTACTGCGCTAAACCAGACTATTATCTACTCATATACGGGGG
AACAGAGCAATCCTTCGAAGCTAAAATGATCACATGCACGCGATGCGGAA
GGCTGACATACAACGCATTTGATCAATCACACGTCAATTACCATGGATGT
TTGAAAAAGAGAGTCCACAATATCACATGCTATGCTTGTCCATATCAAGC
CTCGTGCGGCAACGGAATCCAAAGTCGTGGCAACTACTGGGGAACATCAA
ATGCGACTGGATTTGTTACTTTCTATCCATGTCCACCTTTTTATTGCTGC
TCCTCGTTACGTACCTGTTCATCCTATAACACCTGTGTAAACAACCGCCA
AGGACGCCTATGTGGTGCTTGCAAAGATGGCTACTCACTCAGCATTTTCA
ATAAGTGTGTACGCACTAAACATTGCAACTATAATTGGTTTTGGTTGGCG
TATAGTATACTATGTGTCTTGGCGTTTATTTTCTTCCTGTATTTCAAAGA
TGTTTTACGATTCATGAAAATGAAACTTTGTGCTTTGTTCTGTAGTAGCA
ATGATGCTGATCTACCACAACCACAACAAAACAGAAATATAGAAGAATCA
CTAACTAATTCACCGACGCTGAGTACAAATACGGACGATCCTATAAACAC
CATTTCAAATAGCAGCAATGCAGTAAACGTGTCGATGGACGGCGACAATG
AAAGCATCGTAGCCAATAAAACTGCTCAACAACAACAAGGTACTTTCTCC
GGTACTATCAAGATAGCTTTCTTTTTTTATCAAGCAGCCTCAATCATCCG
CATCAATGCATCTGCAAAAGCAGAATACACAATCCCAATCATTCTTAATT
TGATCACCTCGTTTTTCAATATAAAGATCGATGATAGTTCATCCTCTGGC
AGTTCCGCCATAGACTTTTGTCCACTCCAAACATCTAATACCACAGTCAT
CAAGGTCATCAGCTTAAGCACTATTCTTTCATGTTGGCTCCTGTTTCTTG
CGGCTATTTTGATTACATACGTATATCGACATATCAAGAATCGTTTTTGC
CAACGACAGCCAATTGACCAAAACGAGGCTCATGACCATGGAGAGCAATC
ACACAGCCTTGCATCTCGTTTTATAAACAGATTAAAAGGTAGCTATGTGC
AGTTGCTCTTGTTCGCTTATGCCAGCATTGCAAAGTTCTGTTTGCAGGCC
GTGCACTGCATCGAGATTAACGGTCATAAATATCTATACTACCAAGCTGA
GCAGAAATGCTACCAAGGATGGCAAATGCTCGTATTCGGGATCATATTCT
CGTGGGTTGTTCCGTTCCCATTCGTCTTGTATTTTGCATGTCGATGGTTG
AGAGACAGATCGATCAGCGCTAATGGTTTCTTGATTATGGTGACATTTCC
ACCGGCTATGTTAGTGTATGTTTCAATGTCGATGATGTTAAGATGTTGCA
ACAGTTTTAAACATACCAGATTATTGCCTGCTGTTGATAATGATCAGTCG
AATATAGAAAGAGAAAGTATTTTACTGGTTTTGAACGAACCATTCCGCGT
AAATGTTACGACAGAGGAAGAAGACACCGAGACAGACGAAACTCAAGAGG
ATGACAACAATCAATTAATTTGGGAACCAGTTCTTATCCTACGTCGATTG
GTTTTGACCATATCAGCAACGTTCTTTATGTCACCAGTTCAGAAACTTTA
TCCTGCTGCTTTGCTGTTAATAGTATATACTCTGCATGATCATTTGAAGC
AACCTTACAGTGATAAACGATTGAATCTGGCTCATTTGGTATCCATGCTG
TTGTTGGTTATCCTAGTTATGATTAACACGTTCTGGGCATATTCCGATAA
TATTGATTTGATTCAAGATCGACAATTCTACTTGATGGGCAGTGTTCTCT
TGTATTTTGAACTTTTCATAATGTTGGCTCCAGTTTTATTGGTTGTACTC
TATGGGATTGTTAAATTGGGGCGGTTCGTTTACAAACGTTATTTTCTTAA
AAAACAAGACTGAATGACAGAACATTGGTTTTTAAGTTTTCTCATTTTGA
GTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000322XLOC_000322Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000529-proteinTCONS_00000529-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000529-exon-sc0000002-1575043694:380450..380611TCONS_00000529-exon-sc0000002-1575043694:380450..380611Clytia hemisphaericaexon
TCONS_00000529-exon-sc0000002-1575043694:373628..377718TCONS_00000529-exon-sc0000002-1575043694:373628..377718Clytia hemisphaericaexon
TCONS_00000529-exon-sc0000002-1510915933:380450..380611TCONS_00000529-exon-sc0000002-1510915933:380450..380611Clytia hemisphaericaexon
TCONS_00000529-exon-sc0000002-1510915933:373628..377718TCONS_00000529-exon-sc0000002-1510915933:373628..377718Clytia hemisphaericaexon
TCONS_00000529-exon-sc0000002-1491911889:380450..380611TCONS_00000529-exon-sc0000002-1491911889:380450..380611Clytia hemisphaericaexon
TCONS_00000529-exon-sc0000002-1491911889:373628..377718TCONS_00000529-exon-sc0000002-1491911889:373628..377718Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:373628..380611 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14914 0.11977 0.0893985 0.0291542 0.0946463 0.0373954 0.11279 0.084474 0.26614 0.274715 0.764382 0.397305 11.3075 9.913 6.66035 8.72998 2.48944 2.63259 12.2821 13.7892 0.534377 0.633008 0.855004 1.08825 1.22448 1.40386 0.324795 0.0770288 0.0681609 0.13889
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000529 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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