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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000474 ID=TCONS_00000474|Name=TCONS_00000474|organism=Clytia hemisphaerica|type=transcript|length=643bp
TATATCTACACTGTAAAATCTGCCCTCAGGCGGTCAATTATCATTACATT
TTGTtaataattacttttttttaattacagatatcaaaaatcaaatatta
taaaaatacaataaaaaacaaaggaaaacaaTGGAAAGCAAACAATACAA
GAATCCATCACCACCACCATCAATGATGGTCCGTAAATATCGGAGAGGAA
ATTTACTGGTGTCTGGTCTATTGGTGGGAAGTGTGACGTCAATATATTTA
TATACAATGTGGAGTGCATCACAAGGAACACTTTCAGATGCTGAACTCGA
CATCAAAGTTCGAAAAGCTACCTaatgtatttatttttattttttaagag
cACTCTTGAATGTAGCCTTCTTGACCGATGTAACCCATTTCAATTTGGAG
TTCTCTTTGTACATACCAAAAagcttatttgaaataatagaatGATTTTT
GTAtcataacaataaaaaaaccaccatcttttcagatttttttcttgact
tttgTGTAATTTGAAgggcctcattgttcttataatttcaaagatttcat
GGTTATTCTAtaaaaactatgaaaaattgAGGCTTTTCCAAAATTAACTG
GTTTTGTATCGTTATCTTTCTAAAACAGTCGTTACATTTTTTT Run BLAST on NCBI transcript from alignment at sc0000002:1265236..1267211+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000474 ID=TCONS_00000474|Name=TCONS_00000474|organism=Clytia hemisphaerica|type=transcript|length=1976bp|location=Sequence derived from alignment at sc0000002:1265236..1267211+ (Clytia hemisphaerica)
TATATCTACACTGTAAAATCTGCCCTCAGGCGGTCAATTATCATTACATT
TTGTtaataattacttttttttaattacagatatcaaaaatcaaatatta
taaaaatacaataaaaaacaaaggaaaacaaTGGAAAGCAAACAATACAA
GAATCCATCACCACCACCATCAATGATGGTCCGTAAATATCGGAGAGGAA
ATTTACTGGTGTCTGGTCTATTGGTGGGAAGTGTGACGTCAATATGTATC
CTTTTCATCAAATATGTTTGACAATGTATAAATAATAATATTATTCTAGA
ATTAGTTGAAATTTCTCTGAAGAGATTCCGAACAATCTGAGGTTTAGCAT
AGCTGTCATGACGAACTGCCTACACAGCTTGCGTTCTGATATATTACTAG
TTCTGTGCAGATGTCTTAGTCTTCGTGGGTAGATCGTAGAGTAGGACGGT
TGAATTTGAAAGGCTTTGAATAGtattgaaaatgtcaaaattaccAAGCA
ATATGGCGGCCTTTGGAGCTTTTTCCCATTCGTGCATCGAAGGGGGCTTT
TTATCCTAATAGCAATTTATCTAGAGATTTTTTTCCTTGTAAAACGCTAA
AATTCTACTGAACAAAAATTCTTTTGGTCTGGATGCTTTGAAGTTGATGA
TATGAACCTACTCTTTGCAAAGTAGGAATTGCAACTTTCTCAAGCTGTCT
GTCTAGACACTGCTGGTTCTGTGCACGCGACACACAGATACTATGATTCA
TGCTTCTGACACTTGAACTAAGCGGTAGAGTATTTTGCTCGTCGCAAGCG
TAGAAAGGGATGAGTGTCACAGACAACACATTGCAATGTTTGGCATATCa
accacactcttgtatcaaaGTGAtagtacccaattcccctcatgTGGCAT
CAGTTGATCTGGGGGAAAGGTGTGTCCACTTGCCGAGTGAACCGTATTGT
CACAATGGCCTTGGAATCGAACTCTCGCACGAAATTCATGGACGATGACC
ACCTTTACATCACGACTACGCCTTTTAACAAATTTATTGCCCATTTTATT
GTTAAGTTGTTCAAGTAACCGAACATTGACATTGAAATGTGTATTTGGCA
CCTAAAGAGTACTCCCTATTGCATCAAAATGTTAGCCACTGATACGGATC
AAAATCGTTTCAGgtacctactctcgggtacctaatagctgccCCCCTCC
CGCtcgttaatttttcgaaaattttccacccaggacattcttattccaac
ccccccccccccccttttttttttttaaaaattttcccccccgggaattt
tttttccccccccccccccccagcttattaatttttgggaaaatgttttt
ggaagtttcctcttttgtcctaattctgctgtctTAGCCTCCTTTAAGAA
AATTTCCACCCTGGACATTTTCATTCCAACCCCCTCtttgcttattaagt
tttgaggctattaggtacccgagagtaatctACTGCCAAGGGTTATTTCT
TGTCATGCTGTAAACAAAAGGTAGATTTTTACAGTTACGTTTGTTCCTTG
ACAACAATTTGTGTTTATTTGTTTGCAGATTTATATACAATGTGGAGTGC
ATCACAAGGAACACTTTCAGATGCTGAACTCGACATCAAAGTTCGAAAAG
CTACCTaatgtatttatttttattttttaagagcACTCTTGAATGTAGCC
TTCTTGACCGATGTAACCCATTTCAATTTGGAGTTCTCTTTGTACATACC
AAAAagcttatttgaaataatagaatGATTTTTGTAtcataacaataaaa
aaaccaccatcttttcagatttttttcttgacttttgTGTAATTTGAAgg
gcctcattgttcttataatttcaaagatttcatGGTTATTCTAtaaaaac
tatgaaaaattgAGGCTTTTCCAAAATTAACTGGTTTTGTATCGTTATCT
TTCTAAAACAGTCGTTACATTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000474-exon-sc0000002-1491911889:1265236..1265480 | TCONS_00000474-exon-sc0000002-1491911889:1265236..1265480 | Clytia hemisphaerica | exon |
| TCONS_00000474-exon-sc0000002-1510915933:1265236..1265480 | TCONS_00000474-exon-sc0000002-1510915933:1265236..1265480 | Clytia hemisphaerica | exon |
| TCONS_00000474-exon-sc0000002-1575043694:1265236..1265480 | TCONS_00000474-exon-sc0000002-1575043694:1265236..1265480 | Clytia hemisphaerica | exon |
| TCONS_00000474-exon-sc0000002-1491911889:1266814..1267211 | TCONS_00000474-exon-sc0000002-1491911889:1266814..1267211 | Clytia hemisphaerica | exon |
| TCONS_00000474-exon-sc0000002-1510915933:1266814..1267211 | TCONS_00000474-exon-sc0000002-1510915933:1266814..1267211 | Clytia hemisphaerica | exon |
| TCONS_00000474-exon-sc0000002-1575043694:1266814..1267211 | TCONS_00000474-exon-sc0000002-1575043694:1266814..1267211 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:1265236..1267211 + |
Blast
The following BLAST results are available for this feature:
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