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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000428 ID=TCONS_00000428|Name=TCONS_00000428|organism=Clytia hemisphaerica|type=transcript|length=211bp
CATGACTCAAGATACTAAGAATTCTCCAAACGGAATGAGGGGGTTGATGG
TACTCTCAGCAATGacgaaaaaaacaacataatgAATAACATCggagaaa
ataaatatattctttGATAACGAAGTGGCCCACCAAGACTTGCTTGAGCG
AGTAGAAAGTGATCATGTGGGTGATTGTGGTGATTACTATGAGACTTAAT
ATTGTAGttag Run BLAST on NCBI transcript from alignment at sc0000002:362873..364133+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000428 ID=TCONS_00000428|Name=TCONS_00000428|organism=Clytia hemisphaerica|type=transcript|length=1261bp|location=Sequence derived from alignment at sc0000002:362873..364133+ (Clytia hemisphaerica)
CATGACTCAAGATACTAAGAATTCTCCAAACGGAATGAGGGGTTTGTAAA
TATTTCCAATAATAGGGATAAAGTCACAGGGTGTTTTTAACACCGGAGAC
GATTCGGGAGGCCTTACCCATCTAGTCCAAGACAAGTATATATCATTATG
GAAATGATCTCTATCGATATCTACTTTTCCATTTTAGGGTTGATGGTACT
CTCAGCAATGacgaaaaaaacaacataatgAATAACATCggagaaaataa
atatattctttGGTAAGTTGACCATCTTTCTCGTTTGATTGataacaaaa
ttacaaaaaatcagaTCTGATTTGCGGAAGAGCAAAGAAAAggttgcaaa
aactaataaatgaAGCTCTATAGCTATGGTAGGTCAAGTTCGTTAAATTG
AGTAGTCTACCcctaacacccctttctcagtgacccggtgagagTTTTAA
GCTAGTGTGGATAATTTGAAGGTGCTAAAGTTCCAAAAAGGGTAGAAGAA
CTTTTGTTGTTATGGATATAAGTTTTAGCTTAGCAGCTCATACATTCAGT
GCACtgtccaaaaatttcaaagtttttctcgATTAGAGATGGGATTTCGG
TGAAGAATTCTCACTAGGGGTGAAATTTAAGGGTATTTTTATCACAGGGA
CAGCAGTTGttaaaaagttacttttttgccgatttctgTAGTGGGGAGGG
GAGTCACCAGGTCTGCAAAGTCTCCTAATTTTAAATTCGAGAACAAGGAG
GGAAAATTAAAGAGATCGTTATATTATGATAAAAAACCGACAGCATTCCC
TCAACGGGAAGAAACATGAGGATAATGTTATCCGGGGAAAAAGtttgttg
ttgaaaaattcATTCACATCAAGAAATTTCGGGTATATTCACTTGCATTT
GCTcgatcattttttaaattaccAAAGTCTGCAAAACTAACTTTTAGAAT
ACCGTAGATGCACGGTTATACGTTTTaatcatttaaaacaaaatcattta
atATTGCATTTGAACCTTAGATTTGGCAAAATAGagttaaattatgaaaa
aatattttggtcagtGTAATTGAAGGCCGTGAAATGTTCTCTGGTAAAAT
TTACCTATGGATATATTTGTCaattttacatttttgtgattcttttatta
tttttttctactttagATAACGAAGTGGCCCACCAAGACTTGCTTGAGCG
AGTAGAAAGTGATCATGTGGGTGATTGTGGTGATTACTATGAGACTTAAT
ATTGTAGttag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000428-exon-sc0000002-1491911889:362873..362913 | TCONS_00000428-exon-sc0000002-1491911889:362873..362913 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1510915933:362873..362913 | TCONS_00000428-exon-sc0000002-1510915933:362873..362913 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1575043694:362873..362913 | TCONS_00000428-exon-sc0000002-1575043694:362873..362913 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1491911889:363060..363134 | TCONS_00000428-exon-sc0000002-1491911889:363060..363134 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1510915933:363060..363134 | TCONS_00000428-exon-sc0000002-1510915933:363060..363134 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1575043694:363060..363134 | TCONS_00000428-exon-sc0000002-1575043694:363060..363134 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1491911889:364039..364133 | TCONS_00000428-exon-sc0000002-1491911889:364039..364133 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1510915933:364039..364133 | TCONS_00000428-exon-sc0000002-1510915933:364039..364133 | Clytia hemisphaerica | exon |
| TCONS_00000428-exon-sc0000002-1575043694:364039..364133 | TCONS_00000428-exon-sc0000002-1575043694:364039..364133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:362873..364133 + |
Blast
The following BLAST results are available for this feature:
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