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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000379 ID=TCONS_00000379|Name=TCONS_00000379|organism=Clytia hemisphaerica|type=transcript|length=918bp
CAACTCTCAcgattttgaaatcaaagtgaaAGGGATTATGGGATTGAATG
TCggacaaatttgaaaagtaataattatgacgtttgcataacggAGCGCT
ATTATGAAGAGAGATTTAAATCATATAAATTTCACTTCTTGTGTTGGTTG
AGTCTAAGAATAAAAGATCCTTTGTAatatgtaaaaggtcaatgtAATAC
CTCAGTGTGCGCCGTTAGTTAATTGAGCAAGATGGCGTTAATTTTTACAG
CTAAACCGATTGTCTTTCTCGATTTCTTTTCAGCGTGAATTACTCTTTTC
AGTTTATTTGCGATGATCCACGGTATGACCCGAACACGCCTCAATCTTTT
TCAGGTCATGTCCAGGCTTAAATAGCAAAACATCTTATGTCCCAAACATC
TTTTCAACGGAAATtactttcatttcaattttctaAACCTGCTTCTCGAA
AGTTTCCAGCAGACACTACCAGACTAGGAGCACTATGCAAGGTCtcttct
ttgaaagaaaaatatcgaaattcTGTGTAGTAAAACAGTAGAAAATGTAA
TTGAGAATCAACACACTATTCTAATGAGGAACTACATTGTAAAACGATAT
TTATCAAAGgttatgtttttaaataagagtgatatcgttttcaaataaga
gtgatatcgtttgtttactcatcaattttaatttacaagatTTTTCACAT
Tgcattgacacggatgtggagcaagattggtcagaaagaggaaaagaaaa
acatttattgcttatatcagcataatataacaataggcagacactgtcct
gatatgaaatatgtgtctgatatgaaacgggaacacttatgtaaaaataa
aacctttaatgttCAGCTCAGGCAATTACTAATGCCATCAGAtctattta
tatttttgtatataTCAC Run BLAST on NCBI transcript from alignment at sc0000001:2491699..2492616 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000379 ID=TCONS_00000379|Name=TCONS_00000379|organism=Clytia hemisphaerica|type=transcript|length=918bp|location=Sequence derived from alignment at sc0000001:2491699..2492616 (Clytia hemisphaerica)
GTGAtatatacaaaaatataaatagaTCTGATGGCATTAGTAATTGCCTG
AGCTGaacattaaaggttttatttttacataagtgttcccgtttcatatc
agacacatatttcatatcaggacagtgtctgcctattgttatattatgct
gatataagcaataaatgtttttcttttcctctttctgaccaatcttgctc
cacatccgtgtcaatgcAATGTGAAAAatcttgtaaattaaaattgatga
gtaaacaaacgatatcactcttatttgaaaacgatatcactcttatttaa
aaacataacCTTTGATAAATATCGTTTTACAATGTAGTTCCTCATTAGAA
TAGTGTGTTGATTCTCAATTACATTTTCTACTGTTTTACTACACAgaatt
tcgatatttttctttcaaagaagaGACCTTGCATAGTGCTCCTAGTCTGG
TAGTGTCTGCTGGAAACTTTCGAGAAGCAGGTTtagaaaattgaaatgaa
agtaATTTCCGTTGAAAAGATGTTTGGGACATAAGATGTTTTGCTATTTA
AGCCTGGACATGACCTGAAAAAGATTGAGGCGTGTTCGGGTCATACCGTG
GATCATCGCAAATAAACTGAAAAGAGTAATTCACGCTGAAAAGAAATCGA
GAAAGACAATCGGTTTAGCTGTAAAAATTAACGCCATCTTGCTCAATTAA
CTAACGGCGCACACTGAGGTATTacattgaccttttacatatTACAAAGG
ATCTTTTATTCTTAGACTCAACCAACACAAGAAGTGAAATTTATATGATT
TAAATCTCTCTTCATAATAGCGCTccgttatgcaaacgtcataattatta
cttttcaaatttgtccGACATTCAATCCCATAATCCCTttcactttgatt
tcaaaatcgTGAGAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000379-exon-sc0000001-1491911889:2491699..2492616 | TCONS_00000379-exon-sc0000001-1491911889:2491699..2492616 | Clytia hemisphaerica | exon |
| TCONS_00000379-exon-sc0000001-1510915933:2491699..2492616 | TCONS_00000379-exon-sc0000001-1510915933:2491699..2492616 | Clytia hemisphaerica | exon |
| TCONS_00000379-exon-sc0000001-1575043694:2491699..2492616 | TCONS_00000379-exon-sc0000001-1575043694:2491699..2492616 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:2491699..2492616 . |
Blast
The following BLAST results are available for this feature:
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