TCONS_00000366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000366
Unique NameTCONS_00000366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000366 ID=TCONS_00000366|Name=TCONS_00000366|organism=Clytia hemisphaerica|type=transcript|length=319bp
GTGGCTTTATTTTCCAACCTAAGAGATTTCTTAATCGCCCTTCGGGCCTC
GAATTGAAGTAAATTAAAGTAATCTTAATTTAGAGCACTTATTAACGACA
GACGTTGGTACAATCGTGAGCGCTATTGGAATCACAAAAATGCGAGCTAA
GGGAATGGCTTCGAGTCTgatatttcaattttcgaaGTCTAATTTTTAGC
ACATCATAATAAATTGTTTCATTGTACGACTAAGATTTACAGATACCTTA
ATGATAAGAAGCTCTCACGATCATAGGTCTTAACCCGTGAAATTCTGAAA
CTTTAATTGATGATCTGTT
Run BLAST on NCBI

transcript from alignment at sc0000001:2069745..2070063

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000366 ID=TCONS_00000366|Name=TCONS_00000366|organism=Clytia hemisphaerica|type=transcript|length=319bp|location=Sequence derived from alignment at sc0000001:2069745..2070063 (Clytia hemisphaerica)
AACAGATCATCAATTAAAGTTTCAGAATTTCACGGGTTAAGACCTATGAT
CGTGAGAGCTTCTTATCATTAAGGTATCTGTAAATCTTAGTCGTACAATG
AAACAATTTATTATGATGTGCTAAAAATTAGACttcgaaaattgaaatat
cAGACTCGAAGCCATTCCCTTAGCTCGCATTTTTGTGATTCCAATAGCGC
TCACGATTGTACCAACGTCTGTCGTTAATAAGTGCTCTAAATTAAGATTA
CTTTAATTTACTTCAATTCGAGGCCCGAAGGGCGATTAAGAAATCTCTTA
GGTTGGAAAATAAAGCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000240XLOC_000240Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000366-exon-sc0000001-1491911889:2069745..2070063TCONS_00000366-exon-sc0000001-1491911889:2069745..2070063Clytia hemisphaericaexon
TCONS_00000366-exon-sc0000001-1510915933:2069745..2070063TCONS_00000366-exon-sc0000001-1510915933:2069745..2070063Clytia hemisphaericaexon
TCONS_00000366-exon-sc0000001-1575043694:2069745..2070063TCONS_00000366-exon-sc0000001-1575043694:2069745..2070063Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2069745..2070063 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.449068	0.365128	0.639491	2.60929	2.0619	0.829198	3.02782	2.89255	1.21882	3.26716	2.13251	0.658562	2.22186	1.20485	1.0878	1.39629	2.45328	0.775918	0.358719	1.83604	2.07323	0.369749	0	0.421803	1.9062	0.442184	0	13.5772	10.4764
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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