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TCONS_00000282 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000282
Unique NameTCONS_00000282
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000282 ID=TCONS_00000282|Name=TCONS_00000282|organism=Clytia hemisphaerica|type=transcript|length=448bp
cgcaCTTCTTAGGAAAGAAATCAAGCTGTCaagttttcacctaaattagt
CATTCCTTCCATGTAGATTGGAATTCAGATTATAGTTCTTGAAGTGAAAA
TTGATGAAAGCACTGAATTTCAACTCCTAAAATTTCAGATTGTAAGCtga
aatagatttttaaatttcaaacattttttaaaatgaaatcttTCGGAACT
GAGACAAAATGTAGTGAAAATATACCCTTATAAAGAGATTTTTATCCATG
cttcagattttgagaaaatgtttttacgaccaataatcacttttaacaaa
aggaATCTGAATAGACAATGACGCCGCCAAAGTAAGATGTAATTCTACCT
GATAACAGTTCACTGATCATTCCCAGTCCTATTAGACGAGCGCAGTCCTT
ACAAATTTGAGATTGCAtattgttttcacccatccctttagagcttca
Run BLAST on NCBI

transcript from alignment at sc0000001:298304..298751

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000282 ID=TCONS_00000282|Name=TCONS_00000282|organism=Clytia hemisphaerica|type=transcript|length=448bp|location=Sequence derived from alignment at sc0000001:298304..298751 (Clytia hemisphaerica)
tgaagctctaaagggatgggtgaaaacaataTGCAATCTCAAATTTGTAA GGACTGCGCTCGTCTAATAGGACTGGGAATGATCAGTGAACTGTTATCAG GTAGAATTACATCTTACTTTGGCGGCGTCATTGTCTATTCAGATtccttt tgttaaaagtgattattggtcgtaaaaacattttctcaaaatctgaagCA TGGATAAAAATCTCTTTATAAGGGTATATTTTCACTACATTTTGTCTCAG TTCCGAaagatttcattttaaaaaatgtttgaaatttaaaaatctatttc aGCTTACAATCTGAAATTTTAGGAGTTGAAATTCAGTGCTTTCATCAATT TTCACTTCAAGAACTATAATCTGAATTCCAATCTACATGGAAGGAATGac taatttaggtgaaaacttGACAGCTTGATTTCTTTCCTAAGAAGtgcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000157XLOC_000157Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000282-exon-sc0000001-1491911889:298304..298751TCONS_00000282-exon-sc0000001-1491911889:298304..298751Clytia hemisphaericaexon
TCONS_00000282-exon-sc0000001-1510915933:298304..298751TCONS_00000282-exon-sc0000001-1510915933:298304..298751Clytia hemisphaericaexon
TCONS_00000282-exon-sc0000001-1575043694:298304..298751TCONS_00000282-exon-sc0000001-1575043694:298304..298751Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:298304..298751 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.596212 0.434264 0.336148 0.493303 0.200183 0.474562 0.572539 1.25068 0.899999 1.27713 0.300784 0.512636 0.691071 1.02526 0.168581 0 0 0.342652 0.63119 0.825619 2.15284 2.73021 0.680805 0 0 0.568957 1.22126 0.434455 0.988557 0.671456
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000282 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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