TCONS_00000253 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000253
Unique NameTCONS_00000253
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2286

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000253 ID=TCONS_00000253|Name=TCONS_00000253|organism=Clytia hemisphaerica|type=transcript|length=2286bp
tttgttgtttgttgtgtTTTTTGGAAGGGAGTTGCAAGAAAATGCAATGA
TTGATAAAATAATACAAACCAGCGAAGAAAGATGCCATCgttaccaaaat
cgatttatcaATGGTCAATCGCTGATGTCCTTCATTGGTTGACTGAAAAT
GGTTTCGAACAAGAAACAGAAAGCTTCAAAACTCATCAAATCGATGGTCG
TGCGCTTGCTCTGCTTTATCGATGCGATCTGAAAGAAGTCATCAGGAGGG
TTGGACCGAGAGTGAAATTTCGCGCCAAATTATCACAATTGTTGACGTCA
CGTGGTATGAAGAACAACATGGAACCTAAAGAAACAAGAAATAACAACAA
CAATAATACAACTTCGTTCTACGACCCTAATTTCGGACAGCACGTTGTCA
TGCCAATGTATGGTCAATACGGACAACGACCACCCTACCCTcaacaaaac
aatggaatgaaaaAGAACCAATCGAATGGCTTCTATCCACAACAAAACCA
AATGCAACAAAGGAATTATtaccaacaaaaacaacaacaacaacaacaac
aacaacaacagcaacagcaGCAACAGCAACAGCCAATGAGAATGAACTAT
TCTAATAATCAGCCAATGAGCGGCTGTCAACAAAACATGCCATCCAATGG
GAATACAGGAATGAATCATAACGGACCAATCAGAAATCCGCATTCGAACA
ATACCGCAAACAAAACATGCGATTGCATGACGGTCAAAGCAAATGATTAC
CGTAGTGTAAAGCGCCCGCAACAAACACAAAATCAACCGGAAACTAACCA
AATCAACGGAAGCTCAAGTGCGGAAAACAAAACAGAGAAAATTCCCTACA
CAAAAGATGAAGTAGACATCACAAAGTTTTTAGAGGGGTCTGGGTTTAAA
AAAGAACCAATCGATTCGCTGGAAAGCCCGAATCAACCAATCAGTGAGCA
CAAAGCAAATGGTTCCCACGGCTCTCCCCCACTTTCGTTTTGCAGAAGCT
CACCTAACAACAACGATGAAAACCTTGATCCGACCCACTATACGAATACC
CACGATGGAGGGAGCTTGAATGGAAGTTATGATGGTGGAAATTCTCCATT
GAATCCTGAAGAATCCGCGATGGAGGACGATGAACACTTCCCCGTGTTGG
ATATTACAGAACGTACCGAAGAGCTAGAGAATAAAATGCAGAACGACGGA
ATGAATGTTTTTCACAATGGTTTCCATGGTAGTAACAACGGGATGAACAG
TAAGCTGGGAATTGAAGCTGTGACCAATAGACTTGCGTTACGTGAACGTT
CGAAGATTTTTCGACGTAGTGAAAAGAAATGGCACGTCGCTGTTAACGAA
ACGGCATACCAACTCGTTTTAAAAGATCCCAGTTTGCTGATGAGGAAAAA
AGATTTACGAACAATGGCAGAAACTGAAGTTCGAAAGACCTATCGCTTTG
CTAAAGGTAAATCACGTTCGATAGCCATTCCAGAGAATCGAGCGGCAGCg
gaagagaagaagaaacagaAATTGACCAGAGAGAAAAtcgaagaaatgaa
aagacaacTGAAAGCTGAAGGCGAGGAGTTGAGTCGTCAAATGCGACAGT
GTCAAGTGAACATACAACTGGCCAATCAACAATCAGATATGACGCGATCC
GCAGAACTAAGAGACGAAATGCAAAAACTCAACCAACAGCAGGCTAAAAT
CCATTTTTCAATGCACGAGCTGATCACTAAAGAACGTAAACTGGATGCCA
GTGTAAATAAAATGATGCAAAACGGACATGCACCCACAATGAGTATGGTC
AACACTCAAGGACATCAAATGATGGATTTATCTGATGAAGGGAACTCTTA
TTATAAcaacaatgaaaatataaacgatGACCCAACTTTAACCTCTCCTA
CCCAACTTGTCTCATTCGTTGCCTCGCAACCAACTACATTATCTCCTTTA
AATGCAGTATTACCTCCGCAAAGTGCCGTATTATCTCCCGAAGGATCGGC
AACACAGGTCCACGTGGACAATGATGGACGTGTAATGCAATTCGGCAGCC
AATCAGAAACACCGAATGGCGTAATGATTATAAATAATGATGAAATGACG
TCATCGCCtcaaaatatgacgtcatcacaacaTATGCCGCCGCCGATGGA
GAATGGTGGGAATAATGCTTACATCAGCATGTAGAATGTATTCAAGAAGG
TGTTGAGTGTTAGCTTGTTTTCgttgtagatttttttttataaactgtGT
ATTTATACTCTGAAATATCATTTTGgaataaaaatt
Run BLAST on NCBI

transcript from alignment at sc0000001:2419716..2435298-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000253 ID=TCONS_00000253|Name=TCONS_00000253|organism=Clytia hemisphaerica|type=transcript|length=15583bp|location=Sequence derived from alignment at sc0000001:2419716..2435298- (Clytia hemisphaerica)
TTTGTTGTTTGTTGTGTTTTTTGGAAGGGAGTTGCAAGAAAATGCAAGTA
AGGCTAAATTTTATCTTATTTTGAATTTTATTTATATTTTGTCTTTTTTT
TGTTTTTTTTTTGTCCTCAGATGCCTCGTACTAGGATACAGTATACTAAG
TAAGTACACGTTCGTTTTATAAGAAGAAAATTTTTGAAGCCTTGGGATGT
TCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAATATGTTCTTAT
TATTTTCTCCATTTTTTGACCATTTTCCTAAGAAATCGGGTGTTTTAGAG
TCCACGAAGCCTTAAAATGTTTTAAACCTGTTCTTAGCATTTTGGCCATC
GAAGCCTTAGTTTGTTCCTATAAAAAAACGTGTTCTGTATACTGTATCTT
AGAAAGAGCAAGTACGATAATTTTTATACCTAGCCCCTTTCCAAAGGGGC
TTCCTAAGTTACATTTATTTGACTGTTATTTGTAACCTTGAAAGTTTATT
CCATGTAAGAAATTGTATGAAAAACGGTCAACCTTTTTGTGTCAACGAAC
TGAATCCTCAATGGTACAGGGGTGTCTCTCGATTTTGTTCTTCTGGCTTT
AATCTATCATACAAAAAAAACACAAAATGTGGTAAGAAGCAATTATATTT
TGCGAGTAAACTTTTCATAATTTTTGAGTTTATTTTCATACCGTGTTTAC
CTATAACAATCCAAAAGTATCTAGTCTGAATCGTAGACCTCTTTAGATAT
ACTTCCTACATGGAAACTTTTTTCGCTAGAGGATGAGCAGAAGCCTAAAA
GTTCCGCCCTTGACAATCAAAATCGCCAAAATCGCAATAAAGTGCGTTTA
CCGCAGCACTATCGTAGTTTTTTTGATTTCGGCGTTTTTGATTGTCGAGG
GAACTTTTTAATTGTTATAGATAAGTACGGTATCTGGCAAAAAAATGATT
GCTAAAGATTTTGCCCGCGATACTTTCTGCCTTTGGTGAATTATATGACA
TAAATAAATTTTGACGTATGCTGTTTCACCTTACATGTTTTTTTACAAGC
ATAACGCTTAAGCATATGAAGGCTCAGATTTACAGAATTCCTAAGCATAG
CATAAGCATATTATGTCAGCCTGAAATATTTGTCAAGTTGAAAACTTTGA
AAACTTAAGCATACACGAGCCTGACCAAAGGGGCAGACACTTGTTTTTGA
AAAAAACATGTACCAAAATGATAAGGCTTTTAGAAGGAAGGTTGCTATCA
CAGAACGATCTCTATCTGTCATGGAGATTATCACCTTTTTCTTTCCCTCT
TACGAAATTGAGGAGTGACTTTCCCGCCCTTTGAAATTCCATTTGCCCGC
CCTCACCTTCCTTCATTTAGATCACGTCTATTAGCTCAGAACTTGTTTAA
GGAGTTTTGGGGAGGGGAACTGTAAGAATTGTATTTTTGACTTGTGTGGA
AAAAATGTTCCTGTTTATAGTTGAGTCTTGACCTTACTTACAACTTGGAA
AAATACAATTAGTTTCTAATCTTCTGTCATTTTAGTCCATTTAGCTACAA
TTTTATACAACATCAAAATTTCCTTGAAACAGGAGTGAATTTGAGTTTAT
CAGGTTCGAATATGTAAATTCATTGCATTAAGGAAGGGAGCTGTAAGAGT
TGTATTACACCCCCGGGTTTGAAATGGTCAAAATGGACCAATTGCAAGAG
GCTTAAACCTTTGAGTACCTTATGAAAAATCTTAATACATATTTAAAATC
AGTAGCCCCACTTTTTTGCTAATCAGAATAAAGTCGGCAAATAGGGAACT
TTTGATTATGTTTGCATACTTGACGATGCTTTTGATACACGAAAGAGATT
TTCCAATTTGTCACATTAAAAAATTGATGAAAAGAAATCAGGAGAGGACA
AACAATAAAATAGGTTACTAGAGGTTCAAAACTTGAAATGCCTTTTTGAT
ATTTTGATATGAGTTGACAAAAATATTTGGAAGATTACAGTCCTGTCAAC
TGCCTTTGTCCAGATTGGTGGGGCATATAATATAATATTTAAGGAGGTTG
GGGTACACGTTTTTTTTTTTATAAGGAACCTTAACTTTGCTCTGAGCCTG
GAGTTCCTTATCTTTACAGAGAATTTCAGCCTCAAAGTTCCTTATCGAGT
TCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC
AGCCTGAGCAGTTCCTTAACAATTCCTTATTTTTTGAACCATTTTCAGCC
TCGAGTTCCTTATAAACGTGTTCCTTATAAAAAAAAAACGTGTATGGGTT
AATCTTTTTGCCTTCTTTTCTTTTTCTCTTCACTCGTGATAAAAGGATCG
GTGTCTCAAAGTAGGTATGGAGCTAAAAAGATAAGGTTTTACACAACGAA
TTTACACACCTGTTGGCAATAGTTTTTCTTCTCTCTTTACACCCCTGTCT
CAGTGACCTGGTGAGAATCTTTCAAGCTGATTTTGATAGAATTGAGGAGT
TTAATGCCAAAAGGGGGATATAAAATAGCCTGTTTTTAATGCATGATATA
TCACCCCTGATATTATACCATATTTGGGCTAAGGGCTTTCGTTTGCCATG
GTTAGATTATCTAAAATAGATTTTACTTAACGTAATTGGCTAATTTGAGC
CCTCAAGCCTTAGCAGCCTGTTTGCTTATAAAAAATCATGTAGTTTGTGG
CGTAATATATGATTATTAGGATAATATTCTCAGGAAAATGTCAAGGGTTG
GGTTTATCCTCCTCTCTCTCTCGTAAGAGCTTCCCTTACTCTGAAAAATC
AACCTTGTCCATCTTTTCACAATCCTTCAAAAAGGATGTTAAAAAAGTTT
TTGTTTTTTATTTTGCAAGATCGTTTATTGTAAAAAGGGGGCAGTCTAAA
GGGGGTGGAGATGGGAGGGGACTTTTTAGATTGTTTTAATGTCTTTTCTT
TTTTCACGATGAATTGCCCCCTTGTTATGGCCCGACCCCCTTTTCTTTTT
TCTTTCAATCCGTCTTTTGTATATCTGCCCTTAATTATATATCCATCACT
CACCTATCAATACTATTTTTCTTTCTTCAAATTACGTATTCTATGCTGGC
CAGTCGTGTTGGGGTAAAGAGGGTGAGAATGTTTTTATAGCTATGTATTT
TGCCCTTTTTCTCGTCTTCGTTTTTGAGTAGGTCTTTTTATAATTTTATA
CTAGTTTCTCACGGCGAAAAAAGTATAGTTCTTTTACTTTTTTCCAATGA
TGGGTCATTGGGGAAAAGTATTCCTTCATAAAGGAATTCCTTAATTTCAG
ACTGAAAGTTCAAAATATTTGGTTCATGTCAATGATCTTTATTAAGTTAC
ATCAATCTGCTTTAGTCGGAGTTTTTCGAAAAGTGGTTCCTGCCGGTGGA
TGTGGATTTCCTTTATAGAGGGGGGTTTATCTAAAGAATCCTGCATTTAC
TAAAAATTGACAAAAAGAACGACAAATTTCATAAAAGACGACAAATTCCA
GCGTCCAAAACCCCGATCGAAAGTGACTGTACCATCCCTACGTATAAATT
TCTCTTGCTTTATCACGGGAATTAACTACATATGGTTTAAAGAACGACAA
ATTACGCATGCGTGCTGCAATTCAGGATTCTTTAGAGGAACAGACTGATA
GCCTGGCAACACCCACGTCGAGTAGTGGTTCTATTATTAGGGTTAAAAAG
GTAACGTCGGAGGCTAAAGTCGAATCTCTATCATGGAACTTAAATAAAAG
TTTTATTAAAGTTCCTTGTTTCTATATACGTGGTTGCGTGGCCTGCTTGG
CTCTCGTACAAATACTAACTTGGAAGTCACATTTCCCGCCAAAATTTGAA
AACAAGAAAATGCTAAATTCAATCCGTCATTCGAAAAGCGGTGCAAATCT
AACAGAATCACTTTTGCTTGCCTGGGAAAAGTTTCTGATTCCTTCCTTAT
TTGTAATGATGTACTGGAGCCTTATCTGAGTGCTGGCCTAGCAGACGAAT
AAGACGCAGTGGGTGAGTGAGTCTAGACTACGAAAGGGACGGGTTAAAGG
GACCTAGGGGAGTAGAACCTAATCCTATTGTAGACAAGAACGGTAGACTA
TGCAGTTACAATAAAACTAATATTTAATAATGACAACGCTCTACAATCGG
GCTACAAATACGAAAAGGATACTTACAAACCTATGTCCTGAGCAGGTCCG
CCGCCGATCGCTGCCGAAACAACACTAAAGTTTAGGAGGGCTGGACACCA
ATTGCTAAGTTGCTGCCCAGTGGAGCGTGGAAGGCGCAGTTGGGCGTTAG
AAGGGCGCTAGATACGATGGGTAAAGGTATAGCCTAAGGAACTTTAGTAC
AATGATTAGGGTAACAGATTGCAATTAAAAAAACTTTGATTGGATAGAAG
ATTTTGGGTTACTGGGAATTCAGTTTGTATAGCTTAGTAAATCTAATTGA
ATCTTTCTTTATTATTTCAGTGATTGATAAAATAATACAAACCAGCGAAG
AAAGATGCCATCGTTACCAAAATCGATTTATCAATGGTCAATCGCTGATG
TCCTTCATTGGTTGACTGAAAATGGTTTCGAACAAGAAACAGAAAGCTTC
AAAAGTATGCCAATTGTTTTTATAATCGCTTTAAAAGGTTCTAAACATCC
CCTTCTCACAGACTCACTGGGACCCCTTCACACTGGAAAAATTCTACAAA
TATCGTCCCTGGTGGAAAATTATCCTCCAATTTTTGTCCCCACTGAAAAT
AATCAAATAGAAATAAACCAATTAGTGTGGTCGCCTGACATTATTTGTAG
GAAAAAAATATGATCCGGCTGAAATTTTGCACAGACCTTCCTTATAGTAT
CCTTAAACCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTGGAACACCCTTTTTTAGG
CCATTTTAGTGATGACGTCATAACAGGAAATTCAAAATATCGTCATTTTC
AGACTTTTAACAATATCTTCGCTGAAAATGGTTCAAATGTGATCAAATTT
GGCCAAAAGTTGTGTTTTATGATGGCAATTAAGATGAAAGTATAAAAAAT
GACAAAATTTTATTTTTCAGGGGGTTTGGTTGAGTCAAAATAGCTCAAAT
GAGCAATTTTTGCCTATTTTTGCCTATTTTTTGCACTTTATCATCGCCTT
ACTTTAAAAGAGTCATTCAAACTCTTGATAAAGTATTCTAGCTTCCCGAG
TAAAATGTTTGAACTTTTTAATGGATTCCCCAAGGGATCAGCATGCACTC
CATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAAAAAAGAGGGAGAGCTTAAAATACAAT
TTTGTGAACACGCACATAAAACTTTCTACTCATAGTTGTGTTTCGACTCG
ATACTTTAATTAGGGACACCCTGTACTTTGGATAATGTCCTTTTTACAAA
CACTCATCTCCATTGTTTTCAATGGTTGAAAGAAGAGAATTCTACTTGAG
AGTCGTTAACGATTATCCAAAGTAGAGTGAACGTACTATAATATTTGAGA
CTTGCATTCTTATCTAAAATACGGGTCGGTGTGAGTTTCTATGTCACTTG
TATTTTTTTTTTAATTTAAAATGTTTATGAATTTTTTTGCTTATCTTCTA
GTGGTAAACAATAATAAGAATTAGTAATATTGATTGATAACTTTACTGGT
ATGAACCAAGAAACTTGTACGAACGCAGGAGTACTCAGATTATATACTAA
AGGTTAGTTTTATAATCGTTCGTTTTGCACATTTGCTTAAAAATCCATGA
CAAGACCACCAGTACATAAATCTAGCTGTCAAAATTACACAATCATCCGG
TGAAGACCTTAGAAATTAAACCTATTTTTTACCCTGTTTTATAGTTACTT
TGATAAGCTGTTCTTGGGTTTGTACCTTGTCTTACTGTCTTAGAAATTAC
CCCTGCCTCATCGTCTCAAGAATTCATCTACTGATCTCAGTTGTATGCAT
ACCCGTGTCTCATTGCTTTATAACCCTGTCCCACCTAACTATCTCAAAAG
TTTTGACCTGCTGNGCGGCAAGAAAGGAGAGAGTGGGCTGTTACAAGAGA
TCAAAAATCTGTCAGCTAAAGAGTCCAAAATTTTCGTGCATGAAAAGTGT
CGTAAACGCCTAACTGACAAAAGAACGATTCCAATCGAAACCCTTCCTCC
AAAACGACTACGATCTTCGTTGGATAGAATTTTCAATTGGAAGAAAGATT
GCTTTTAATGTGCCAAACCATGTGATAGTAAAAAAGATGATTACAAGGAA
GTCGAGACAATCGAGAGGCGCAAAATTGTTTTGGAGGCTGCATTAAACCG
GAAGGACGACTGGGGAGAAGAAGTTAATGGAAGATTGCAAACATGCATAG
ATTTGCCAGCAGAAGAGGCAAGATACCACTGCTATTGTATGATGGATTTC
TGCTTACACGAAGCCCCGAAGCCTAAAAAAGGCAGACCTGAAAATATAGA
AATGTCTGAAGCGTTCGAGATGTTTTGTCATCACTTCGAAAACATGATGG
ATTGTGAAAGCTACACAATACAGAACATACAATACAAGAACTTCACGAAA
AGCTCCTTGAATTCAACGAGAACGGNCTAAAAAAGGCAGACCTGAAAATA
TAGAAATGTCTGAAGCGTTCGAGATGTTTTGTCATCACTTCGAAAACATG
ATGGATTGTGAAAGCTACACAATACAAGAACTTCACGAAAAGCTCCTTGA
ATTCAACGAGAACGGATACACTCTTCGTAGATTTCGTGATAAACTAAGTG
CCAAATACGAAGGGCACATCTACTTTGTTAAAGGAAAAGGTCGCCAAAGT
GACTTAGTAATGTTCAGAAACCTTGCTGATTTTCACCTCCGAAGACTTAA
ATCATTAATGACAAAGGGAGGCGTCTTAAGAGCAGCTGCACAAATCATAA
AAGCTGATATTCGAGATCTAGATGTCTCGAAATGGCTTGTTAATCATTTG
TCAAAACTTGGATTAGCAATAACACCCGATGAAGTTACAAGATTCAAACA
ATCAGTCATCGCAAATCTAAATGCCGATCAGTTGTCTCAAATCAACTTAG
AAACGCTGACTCAACTGTTCGCTCAGTGGATTGCAGATAATGCTGACCAT
AACACTGTCACCCTATCAGGAAAAGGTACATTTCACGGTATGGGCATCAT
TTGTACAAACCACCTCAAGAATATTTCGGACGTGTTCCACGATTGAAAAA
ACGCCTCAAAGTCGAAAGGCNTCAAATAATGTGCTGGTCTCTCATTAAAG
ATGATGAAAAGGACTTCTTTGTCTTCGACGTATGTAAATGGGGATGGAAA
ACACACAAGGCGGATGTACTTATTCCAGTTAAGACCGATCAACCTTTTGC
TCCGGATTCTCTCCTGAAGGTAATCAGATGCAAGTGCAAAACAACTACCA
AAAACCCATGTGGACCGAAGATTTGCACGTGTAAGAAGTATAACCTACCT
TGTGTTTCATCGTGTGGCGATTGCCATGGAGTTGATTGTAACACAACAGA
AATGTAATTTGGCTTTAAACTATCATTAACTATGCCAAATTTTAATGCAT
CAATTTGACCCGAGTGAGAAACTCATTTTCCTTAAATTAGGTCATAACTT
CTGACCACTTGAGTTTTGAGGAAAACGTTCGCCTGTTTTGTAACTAAGGA
GCAAGATTTTATAAAGACAAAGTGTTTAATATGGCAACTACTGTAGCTCC
CCTTACTAGAAATCCACTCACCAAGCTGTCTGACGACTTCCCCTCATTGC
TTATTTCTCTAGGACGAGGAAAACGTTTTCGAAGAAGAAGAGTTAGACGA
AGCGATTAGTGAACAACTCGAATGGACAAGACACTGAAAATATTTTTGAA
AAACTCAATGATTGTTAAATAGATTTTTTTCCTTTTCAAAAAACTCTCAG
ATTAATTTTAAATTCAAGAATCCANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAAAAATCGTCAAAATTAGGCAAAAATTGCTAATTTGAGCTATTTTGA
CCCAACCAAACCCCCTGAAAAATAAAATTTTGTCATTTTTTACATTTTCA
TCTTAATTACCATCATAAAGCACAATTTTTGGCCAAATTTGATCATATTT
GAACCATCTTCAGCAAAGATATTGCTAAAAGTCTGAAAATGACGATATTT
TGAATTTCCTGTTATGACGTCATCACTAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGTTTAAGGATACTATAAGGA
AGGTCTGTGCAAAATTTCAGCCGGATCATATTTTTTTCCTACAAAGAGTG
CTTTTTAAGCTGGCACGACCATACTAAATACTCACTGCGAAATGTTATGT
TATTTTTTCCTTCCCTACTGAATTTTCCGAATTGAAAACAAAAGAATTGA
AATCCCCTGCCAAAAAAATATGGGGATATCGCCATTGTATTTTGGTCCGT
TTTTTTATCTCAACTGGCTGAAAAAATCCTACCGGGTCTGTGAGAAGGGG
GTGTTTCTAAGAATGTTTCCTGGCACGAAAGAATGTTGATCTGTTCAATA
ATTGTTCTTCTTTTATTGAAGTTTAGAAAATTACAAAAAAGTTACAAATG
ATTTCTATCCCCACCCTCGTTCCAGTGACCCGGTCGGAATTCATTCAATA
ATGAAGGAGCTAAATTTACAATTTCTTGACTTTCATAAGTCGAATAGATT
TCAATTTTATCTACCGCCCGTCCAGCTCTATCGAAAATTTGAAAAAATTT
CTTGCTGGGCCAGATAAATCTAATAATAAAAGTGAAAACTAAAAATTTAA
TTTTGTTCATTTCTTGACGTTTCGTTGTCTTCTTTGCACCATTACTATAC
TTGTAGTAAAAAAAATTCAAAACGAATTTCAATTTACAAAATTAAAAAAA
TATCACAAAATTAAAAAATTACTACCAGGTAATTACAAGTTGTTAAATTT
CACAAAGGAACGAATACATATTAAAAAGGCTCAAGGGGGGATGAAGAAAC
GTGCTCATTCAAATTCGGTTTGAGCTCCCTTATTCCTATAGAAAAGGCTC
AAAGCTCCTCCAGCTACAATAACGTTGGAATAATAGGGTATTTTTTTGGA
AACGATTTTTTTGGACACTTAATTTCGTGAAGGGTCTAAGAAAACCTGGT
CTGTGACAAATGTTGTGATTAAATAAACGTTATAATAATGAAACAAATAT
CTGATATAAAAAACTACATGGAGCTAGTCTGTACATGGTGCAGCAAAACA
ATGCGCCATTTTTATAATCAGGCAAATTTGATCAATCAAGACCGTTTTGT
CGCCTCCTCGTTTCCTGTTGAGTCATTTGTTTATCTTGGTTGAAAAAATT
GCCGGTACCGAACTGTGATCTTCTCCCGATCTGGTCTACTCAGCAAAGAT
GGCGTATTAATTTGCTTCAACTCCCATGCGCTATGGCGTGAAATAGACAG
AGTAACTCGATCTACTCTCTATGAATAAAAACTTCTTATTTTTCTTCTAG
CTCATCAAATCGATGGTCGTGCGCTTGCTCTGCTTTATCGATGCGATCTG
AAAGAAGTCATCAGGAGGGTTGGACCGAGAGTGAAATTTCGCGCCAAATT
ATCACAATTGTTGACGTCACGTGGTATGAAGAACAACATGGAACCTAAAG
AAACAAGAAATAACAACAACAGTAAGATTTTGAAGACAGTTCTGTTAAAC
TACAATCAAGGTCATGATATTTGAGAAAAAAGAGAAATTCCCCAGCAAAT
TTTGAAATCACAATCGATTTGTAAGTACTGTAAAGTAGGTTCAAAGGGTA
GAGTTTTAACTCTGTTTTAACGCTAGACTTAGAATCTGAGGATCCAAAAG
TTCAAAAATAGTCCAATAAGGCCTTGAAGTTAGAATAACCGGAATTCTCA
ATATATTTCGACCATGATTGTAGATCATTTTTATGAACCCGACGATGGTA
TAAACACCGAAAAGCTTCGAGACAAACAGTTTCTTGGATTTTTAAATTTT
GTTCAAATTCAATATTACCAGAGGAATGCAAAGAGATGGAAAAACAGCTT
TTCTGATTACTCAAAGTTCAACGATCACNGGAATGTAAAGAGATGGAAAA
ACAGCTTTTCTGATTACTCAAAGTTCAACGATCACTTCTATTGAAAATTC
TATTGTAAAAACGTTGATTAGGTCATTAAATGTAAGTCCAGAAAAGACGG
CTCGCCATACAAATCGGAAGGTTTCTACATGATTTGACGATAGAAATGAA
AATTTGTTTTTCCTTTTTTGCCGATTACTAGTTCAATTTTTAAGAATAAG
GAGCAATATTTTTACCAATGTATAGCAAAAGAAATTCTTAACGCAATGAT
ATTAAATTGGTTCTTGTAAAACTGTCAGAAGTCGAGTAAAATCAAGATGA
AGTTATAATATTCTCGAGCTCTAGCTTTCCATATTATGGTGCGGTCATGA
TGCGGTTATATCAGTAGAATCGCTAGGAAATTCTGAGCAAGAAGATATAG
GTACCTTTTCGTATAGGAGAGGTGTACCCAAAATATAAGCCCTAAAAGTT
TGCGCATAATCAGGCTTGAAACAAAAGAATTATTTCACAACACGCTACTA
CTAGTAATTATGCAGATTTTTTATAGCGACAACAAAAGAAACCTATTTAC
TCGACATAAACTCCCTTAAGGGCAAGAGACCTGGTATATGACGAGCAGTT
TTTCCATTGTTTTCAAGAAGCTGTTTTTCCATCTCTTTACATTCCTCTGA
TATTACATGACGAACTTTGGCACAAATAATTTCTTATTCGTTAAATATTT
TCAATATATCGAATTCCAAAGATGTTACGATTGTTCGAGTCTCTTACGAG
AGCTTTACGAAGAAGCTTTTACTGTTTAAGCTGTAACATTTTGAAGCATT
GAAAGTTTTTTGTAGCTCTTGTTGCGCGGTTTTAAGACAAAATCTTCTGT
TTTTTTTTATAAATTATCTTACTTAAATTTAACTTAGAAATTCTTTATAG
GTCGTACTGTATACCATTCATTGCTTTTCAACATTTTATTCAGATAATAC
AACTTCGTTCTACGACCCTAATTTCGGACAGCACGTTGTCATGCCAATGT
ATGGTCAATACGGACAACGACCACCCTACCCTCAACAAAACAATGGAATG
AAAAAGAACCAATCGAATGGCTTCTATCCACAACAAAACCAAATGCAACA
AAGGAATTATTACCAACAAAAACAACAACAACAACAACAACAACAACAAC
AGCAACAGCAGCAACAGCAACAGCCAATGAGAATGAACTATTCTAATAAT
CAGCCAATGAGCGGCTGTCAACAAAACATGCCATCCAATGGGAATACAGG
AATGAATCATAACGGACCAATCAGAAATCCGCATTCGAACAATACCGCAA
ACAAAACATGCGATTGCATGACGGTCAAAGCAAATGATTACCGTAGTGTA
AAGCGCCCGCAACAAACACAAAATCAACCGGAAACTAACCAAATCAACGG
AAGCTCAAGTGCGGAAAACAAAACAGAGAAAATTCCCTACACAAAAGATG
AAGTAGACATCACAAAGTTTTTAGAGGGGTCTGGGTTTAAAAAAGAACCA
ATCGATTCGCTGGAAAGCCCGAATCAACCAATCAGTGAGCACAAAGCAAA
TGGTTCCCACGGCTCTCCCCCACTTTCGTTTTGCAGAAGCTCACCTAACA
ACAACGATGAAAACCTTGATCCGACCCACTATACGAATACCCACGATGGA
GGGAGCTTGAATGGAAGTTATGATGGTGGAAATTCTCCATTGAATCCTGA
AGAATCCGCGATGGAGGACGATGAACACTTCCCCGTGTTGGATATTACAG
AACGTACCGAAGAGCTAGAGAATAAAATGCAGAACGACGGAATGAATGTT
TTTCACAATGGTTTCCATGGTAGTAACAACGGGATGAACAGTAAGCTGGG
AATTGAAGCTGTGACCAATAGACTTGCGTTACGTGAACGTTCGAAGATTT
TTCGACGTAGTGAAAAGAAATGGCACGTCGCTGTTAACGAAACGGCATAC
CAACTCGTTTTAAAAGATCCCAGTTTGCTGATGAGGAAAAAAGATTTACG
AACAATGGCAGAAACTGAAGTTCGAAAGACCTATCGCTTTGCTAAAGGTA
TGTATTTGATTATTATGTATTAGAGTTAACGATTCGTGGTATTCATGACC
TAATGTTTTATACGGAAACCCCATAAAGACGGGGTTTTAAGGTTCGCCAC
TGATTTTGAATCTAAACATTAAAATTAGCGGTAAGCGCCCGGGCTATTTC
CGATGCTTCCGTATGAAGCATTGCGTCATGAACTTCATGAATAGACCTTT
TCATAAATTACGTCACGAACATCATTTGCCTCGTATTCAAACAATTACCA
TGGTGATTATATCCCTTGAGACATTAAATGATATGAATAGAAATTAGTAT
TAATAAAATCCACTGGGAGTTAATCACTTTGGCAATAATTTTAAAACGAG
GCAAATGATGTTCGTGACGTAATTTATGAAGAGGTCTATCCTTTAAAATT
TACTTCAAAATCAACTTTTCGAAATATAAGGAAGATGGATGTAGAATCTT
GTTTACGACATTCGTTCGATGGAAACCATGTGAGGCACATGTGAGTAAGC
TGTCACGATATTAATATACTTGCTCAATAACCCAAAGACAAAATCAGGTA
CTCCATTTTTGAAAATCTTCGTTTCTTTAGGTAAATCACGTTCGATAGCC
ATTCCAGAGAATCGAGCGGCAGCGGAAGAGAAGAAGAAACAGAAATTGAC
CAGAGAGAAAATCGAAGAAATGAAAAGACAACTGAAAGCTGAAGGTAAAG
AATCTAAAGATGGCCCACTTATTTTGCCCAATTCACAATTGTGAATTTAA
GTGGGCTGTCTAAAGTCAATGCATTGCCCTCTTTTGACGTCAATGCAAGG
TCTTCTTTGAACTCTTTTCCAAGCAAAGATTTTAGCTGCCAACTTTTTGC
TCAACTTCTGCCTACTCTAACAATAAGAATAGTCAGGACAGAAAGTCGGC
CGTCTAAACTAGAGCTAATCAACCCAATGCTTTTCCCGAACAACAAAGCA
CAATGGATTAACTTACTAAGAAGATTTTTGTGTGTTTAATAAACAAAACT
TTAAGAGTGAGTTAACCCACGGTGCTTGTTCCCCCATCCAAATCAAGAAA
TCTTATTGGGTAAAAAGTAGCACATGACTTCCTTATGGCAAAAGTATGAC
TGAAAGAATCTAAATATCCTCGATAGATTCGAGATGTTCATTATATAATG
TTTTTACGGGAGCACAAAAAATAGACCGGATGTTGAATTTAAACAATAAA
ACTAGTGACAAACGCCCGTGCTATTTTTATGCTTCCGTATAAAACATTAC
GTCATGGATATAATGCATTCACTTGCTTACTTATGTCGTTCAATGTCCCA
TGCATTCAATATTCCTAAACGTACTCACTTATACGCTCACATTTACACGT
CCACATTCTTATTACAGGCGAGGAGTTGAGTCGTCAAATGCGACAGTGTC
AAGTGAACATACAACTGGCCAATCAACAATCAGATATGACGCGATCCGCA
GAACTAAGAGACGAAATGCAAAAACTCAACCAACAGCAGGCTAAAATCCA
TTTTTCAATGCACGAGCTGATCACTAAAGAACGTAAACTGGATGCCAGTG
TAAATAAAATGATGCAAAACGGACATGCACCCACAATGAGTATGGTCAAC
ACTCAAGGACATCAAATGATGGATTTATCTGATGAAGGGAACTCTTATTA
TAACAACAATGAAAATATAAACGATGACCCAACTTTAACCTCTCCTACCC
AACTTGTCTCATTCGTTGCCTCGCAACCAACTACATTATCTCCTTTAAAT
GCAGTATTACCTCCGCAAAGTGCCGTATTATCTCCCGAAGGATCGGCAAC
ACAGGTCCACGTGGACAATGATGGACGTGTAATGCAATTCGGCAGCCAAT
CAGAAACACCGAATGGCGTAATGATTATAAATAATGATGAAATGACGTCA
TCGCCTCAAAATATGACGTCATCACAACATATGCCGCCGCCGATGGAGAA
TGGTGGGAATAATGCTTACATCAGCATGTAGAATGTATTCAAGAAGGTGT
TGAGTGTTAGCTTGTTTTCGTTGTAGATTTTTTTTTATAAACTGTGTATT
TATACTCTGAAATATCATTTTGGAATAAAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000138XLOC_000138Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000253-exon-sc0000001-1575043694:2435252..2435298TCONS_00000253-exon-sc0000001-1575043694:2435252..2435298Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1575043694:2430495..2430628TCONS_00000253-exon-sc0000001-1575043694:2430495..2430628Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1575043694:2424278..2424448TCONS_00000253-exon-sc0000001-1575043694:2424278..2424448Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1575043694:2421802..2422905TCONS_00000253-exon-sc0000001-1575043694:2421802..2422905Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1575043694:2421105..2421218TCONS_00000253-exon-sc0000001-1575043694:2421105..2421218Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1575043694:2419716..2420431TCONS_00000253-exon-sc0000001-1575043694:2419716..2420431Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1510915933:2435252..2435298TCONS_00000253-exon-sc0000001-1510915933:2435252..2435298Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1510915933:2430495..2430628TCONS_00000253-exon-sc0000001-1510915933:2430495..2430628Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1510915933:2424278..2424448TCONS_00000253-exon-sc0000001-1510915933:2424278..2424448Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1510915933:2421802..2422905TCONS_00000253-exon-sc0000001-1510915933:2421802..2422905Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1510915933:2421105..2421218TCONS_00000253-exon-sc0000001-1510915933:2421105..2421218Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1510915933:2419716..2420431TCONS_00000253-exon-sc0000001-1510915933:2419716..2420431Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1491911889:2435252..2435298TCONS_00000253-exon-sc0000001-1491911889:2435252..2435298Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1491911889:2430495..2430628TCONS_00000253-exon-sc0000001-1491911889:2430495..2430628Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1491911889:2424278..2424448TCONS_00000253-exon-sc0000001-1491911889:2424278..2424448Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1491911889:2421802..2422905TCONS_00000253-exon-sc0000001-1491911889:2421802..2422905Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1491911889:2421105..2421218TCONS_00000253-exon-sc0000001-1491911889:2421105..2421218Clytia hemisphaericaexon
TCONS_00000253-exon-sc0000001-1491911889:2419716..2420431TCONS_00000253-exon-sc0000001-1491911889:2419716..2420431Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2419716..2435298 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.36687e-07	5.02553e-07	3.26662e-08	0	0.0681869	0.432587	0.184681	4.00418	2.69241	6.95304	0.595141	0.144297	0.00115925	0.851621	0.00345093	0.0344346	0.895219	0.00225483	0.0264538	4.2393	0.141578	1.25352	1.18257	2.85137	0.0857734	0.216021	3.54294e-07	0.167951	0	2.7787e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000253 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top