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TCONS_00000228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000228
Unique NameTCONS_00000228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length953

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000228 ID=TCONS_00000228|Name=TCONS_00000228|organism=Clytia hemisphaerica|type=transcript|length=953bp
tctaaattgtttttttacagGTAAAACAAACAATAACATGAAATAAATAT
ACCTACTGAAAAAACATATAATGTCTTCTTTAAATTTCAACCCTGAAAAT
CAAGTTTCAAATCGACCATACCTTTCATCAAACACATTGTTAGCGACACC
AGCTACGTCCAGTCAATACCATTTACAATGTGTTCCAAAGGAGCACAAAG
AGAGGGTGAAATCAGCACCACCTCGTACAAGAACAATTCGAGATTACCAG
AAATGCAATATTGTTAAGGAAGAAATGAGATGGGAGGAGAGATGTAGAAA
AGAATCAACTTTACAAAAAAACTGggagAAAAACTTGGGGTTTCTTGCAG
ATTATGACCAATACGGTGAACAAAAGCAGCGCAACAAGCCTCCAAAAGAG
ACGCCGTCAGTTTATTCCGTCACTTCTCGACCGTTGACGGCGTCACGGGA
ATACGGCAGTCGTGTTTCGACGGCGTCTGCTAACGAAATGAATCGCTTAC
AACGTAACATGAGTCGAGGAAGGAAACGAAACGAAGACTTGTTGTACTAT
GACTGATTTGATTTGACCAACaatttattttgattgattgattcaaaAAT
ATATGCGTGGATGACTTTTGTTTGTTGTGCCAAGTGGGACTTACGTATTG
CAGTCGTTTTACGTCTTTCGTTCATTACGTAATCAAGGACAAATTATGCT
ATGTATAATAATAATGATCCTGAGCAAAAAATGTAACATTTTTTATCTAT
AAAACGTTTGGATTTCCATGGACCAAtggctttcaaagtttgaataTTTC
CAATCATTATACAGTATTTCGCTTTCGTAACGGGTTAAAGAATTTCTATT
TATCATGAATTTTACCCTTTATATTACAATGAAGTAAACACAGTCGCTCT
cgtgttgtcttctgaccagccaccagaaccgttggaaaaccaacggatcc
ggt
Run BLAST on NCBI

protein sequence of TCONS_00000228-protein

>TCONS_00000228-protein ID=TCONS_00000228-protein|Name=TCONS_00000228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
MSSLNFNPENQVSNRPYLSSNTLLATPATSSQYHLQCVPKEHKERVKSAP
PRTRTIRDYQKCNIVKEEMRWEERCRKESTLQKNWEKNLGFLADYDQYGE
QKQRNKPPKETPSVYSVTSRPLTASREYGSRVSTASANEMNRLQRNMSRG
RKRNEDLLYYD
Run BLAST on NCBI

transcript from alignment at sc0000001:1989004..2000952-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000228 ID=TCONS_00000228|Name=TCONS_00000228|organism=Clytia hemisphaerica|type=transcript|length=11949bp|location=Sequence derived from alignment at sc0000001:1989004..2000952- (Clytia hemisphaerica)
TCTAAATTGTTTTTTTACAGGTAAAACAAACAATAACATGAAATAAATAT ACCTACTGAAAAAACATATAATGTCTTCTTTAAATTTCAACCCTGAAAAT CAAGTTTCAAATCGACCATACCTTTCATCAAACACATTGTTAGCGACACC AGCTACGTCCAGTCAATACCATTTACAATGTGTTCCAAAGGAGCACAAAG AGAGGGTGAAATCAGCACCACCTCGTACAAGAACAATTCGAGATTACCAG AAATGCAATATTGTTAAGGAAGAAATGAGATGGGAGGAGAGATGTAGAAA AGAATCAACTTTACAAAAAAACTGGTAAGGACCATGTGAATTGTATTTTA ATACCATAGTGTCTTCCAGGGTTTGTTCCCCCACCAAATTCTTGGTTTTT TTTAATCTCCCCCTCTTTTTTTCCCCCTATGACTTTTCAGTTTTTTAGTC CCCCCCCTTTTTTTGCTTTCCCCCCAGAAAATTCTGAAAATATCAGTTCC CCCATATACCCATATAAATTTCACCTGACACAAACGTAAAATTTTGCTGC AAAAGGAACACTATCACTAGACAAAATAGAACGAAAATGGGTTAATGTAA ACAAACATGCTTAGAAAAGCAGACTTAAAACAACAATGAAATGAAAAATT AAAATCCTAAATGAAATCAAAACAACTTTAAAAAATACTGAATATCAGGA TCCTAAAATAAACACACAAGATGAAGATAAAGATTTCACACTTCCCCCAC CAAATTTGCCAACTATCGATGTTTTCCCCCTCTCCTATTTCCCCCTTTAC TATTCAAATTTTCATTTTTTTCCCTCACCCATCCAAAATTGGAAAATTGG TCCCCCCCTTTATAAAGGGGGGGGGGGAGGATACTGAATACCAACATTGA AGTCTGTCAAAAAGATATGTTCAACGTTTTTATTTTGACCATAACTTTCC AACCAGTTGTGGTATAATGAAAAGCTTGGTATTATTGGAAAGATATGTAA ATGCAATTATATTTTCCACCAGTCTTTTGAAATTCTTCTAAAAAAGTGAA GAAAAACGAAGAATAAAATTTGCTAGTTTTGCTAGTACATTGAATGATTT TTATATCAATGGAAAGCTTGATAATATTATGTAGACTGCATGCATCCCCT CTGATATGGCTTGATGGTAGGGGATGTGTATCGTGTATTAAATTCTCATC TGAGAGCTACCCCCATTTTTGGGCTTTTGAATTTTAGAAACTTGCTTAAC TTGATTATTGTAAACAAATTAATCCTTTGATACATCTTTAGTAAAAAAAG TGTTTAATAACAGAAGCTTCTGTTCATTTTTTCTAAAATTTATTCGTAAA CGTTTCGATTCACAACAGAGAATCATCATCAGTGCATAAAAATTGAAATG AATTCCAGGTACAAATTCTAAATTCTTGAATAAAATTGATTAAAAATTTG AATGGCTAAAGGTTAATAGAATCATTGGATTTCTGAAGCTTTTTTAAAGA AAATTGAAACAGGTTACCCCAACTCTCGGACGGCAATTTTATACACGATA CGCATCCCTATATCAAAATCAATTCTAGGAATGTGCGCAGCCTAGATAAT AATGATATGAATCGAAAAATATATCAACTTTAATGGTTAGAAATAATCAC AGACTAGAATTTTTCCGTTTATTCAGGTTTATGTGGATATTTTGTTATTT CATCCTTTTGTTTGATATCAAATTTTTCAAAATCAGAGGGTTATGTATTC CTTCTATTTTTAAATTTGTTTCCCAAATGAAAAAATACAGAATAAAATCA TTGAGACAAAGTTTTGATGCTGGGAACCTTGAGTGGATTATGAAAAATAT CTAAAATCTGAATTTTCGTCAAAACTCTGAGAAAAATAAAAGAAATTACT TGAAAAAGATACTGAGACAGACTAAGACCCAAAATTTAGTCCAACCAAAA ATATTGAAAAACAACCACTGCACTTTACTGAAACACAAGACGTCTACAGC TAGATCGATGTTAATTTACTAAAATTTGTCTTTCTTTTTTTTTCCAGGGA GAAAAACTTGGGGTTTCTTGCAGATTATGACCAATACGTAAGTGTTTGAA TTTTTTTATTTTTGGGATCTTGAAAATACTTAAAAAGAAGACAGATTTTA ATTCTGAATTAAAAAAAAAACGAAGAATTTTTTTTATTTTTGATGTTGTT GTATTTTTAACAATAGTAAGCATAATATTTTAACAATGGTGATACTATTG CTGGAATCAAACCATCTGTACGAGAGCTTTCTCCCACTTACAAACTACCA GATTGTAAAAACAGTGAGGGCGGATTTAAGGTGAGATCAACGCCCCAGGT AATGTCTTGAAGGACTCCTCATCGACTGGGGAAATTGTCTTCAGTAGTTC TATAGACGAGATACTTGCTTTCTTTGGAGAATTTTGATTCCATTTGTGTT AGTTCTAAACGAGGCTGGGTTGAGGCTGACACAGGGTGAGTCTCACTAGA GAAATTTAGTAGTTGCATGGTTTTGCAATTTGATTTCTTGTGTGTTCGAT TGCATGGAGAGGTTTGATGTACATACATTTGGTGACTTGAGTTACCCTTG CATTTATGGTAGCCTCTCTCTTTTGTTTGCAGACCCGGCGACGAGTTGAA CTAACTTATGCTAAATTATTTTGGTGTGACTCTGATGTTGTTTTAGAGCC ACACCATTTGCTTGGCGATATTAATAAATTCCAAAATCGTTTGAAACGTC CAGGCTTTGCTATTTGTTGGCGATTGTCGACTAAGGTTGGTGGTTCAATA GATTGCCCTTCCTGTTCATTTTTAACTTCATGTTCTTCATCGGGTTTCTT AAGCTGAGGAGGTGAGGGCTTTTGTTGGGAATTTCTAATTGAAACCTCAA ACTTTAGTGGTGGTATGATTTGAAACTTATGTGTTGACACATTTGGTCGT CTTTTTTTTCTCAGTTTTAGTTTTTCTTGTTTTAACTGCATAGCACGCGG TGTAGTGTGTGCATCAAGTGCTTGGAATTGATTGGTTTTTACGTTGAACT GTGGTGTTGAACTGACAGCAGACACATATATTATGACGTCACTTTTCCTG GTCAATTTGATTGATTCCTCGGAGGTTTTGGCTGATATAATCACTTCAGA AGGTACACTTGTTAATTCGTCATCTTCCTCCTCTTTAATCGTTGGCAAAG ATGGCTTAAAACGAGTTGAGATGACTTTAGATTCGGAATCCTTTTGTCGA GGTCTGCACTCATTGTTTCCCTTGCACATCTCCTTAACTAACGCCTTTTT ATGTAACTGGTCTGGCTTGCTTGTTTGAAGCTCGACGTCTTTAGTTTCTT TACTGACAATGTCTACAGTTAATGGTCTATCACCTTTTCCTTCTTCTGAA ATTGCAGTTTTTTCAGTGATAACAACTTTCGTCTTCTGTGACTCAGTCTG ATTTTGCAACATTTCTTGCGCCGCTTTCAGATCTGCCATGTTGACGCATG TTCGCCTACTTTTCTTTCGGCGTTGGGATGATTTAGATGTACTAACCAAG TTCTCTAAGGTTTTTGAAGCATCAGACTCTTTAACTTCGACAATCACAGG ACTCAAGTTTGGCATAGTTTCAGATATTTGCATCAAATCATCTTGGTGAA ATCTTATCGGCTCTGTTTGTTGAAATTCGGTATCGCCGATATGGGCCTCC TCATTGGTAGAATTTGTGGTCGATGGTTCAGGATCTTCAACTTCTTCCGA TATTGGAGTCGTTTTAGCGACCACTTCTTTCGTCTCCTGGTGTTGAGTCT GATTTCGCAACAATACTTGCGCGGATTTTAGATCCTTCATATTGACACAT GTTTGTCTGCTTTTCTTCCGGCGTTGGGAAGATTTAGATGAGTGTTCCAA TTCATTTTTGGCATCGCTGACCACTTTTTCTGATGTTTCGGAAACATCAA ATTCTCCAACTTCGGTCATTTCAGCACTCAAGTTACACTCAATTTCGGAA TTCCGTGTATTTTGGTGATTGTTTTCTGACTCTGGTCGTTGAAACTCTGT GCCAAATGCTTGGGCAACAAAATTTTTTGTTGATGGTTCATTATCTTCGG CTTCTTCGGATATTGAAGCCATCTCAGCGACAGTTTCTTTAGTCTCCCGA GGCTCGTCTCGACTTCGCAACATTTCTTGTGCAGCATAAAGATCTTTCAT GTTGACACACGTCTGTCTTCTTTTCTTGCGCCGTTCGAAAGATTTACCGC TTTTTGGTAAGTTTTCCACGCCACTATTCGACGCTTCAATTACTGTTTTC ACTGCTAATTTTAAAGCATCACGTTTTTTAGGCTCTGTTTTTTGACAAGT CAATACTTCCTCTGTCATTGACGTGTCTCGGTCTTCGATTGACGCCTTTG TTGCAAGAGAGCTGCTTGTATTGACAGCGTTTACGGAAATGTTTGTCCTG TCATTAGAACCGGATAAAACCTTTTGTCTTTCTAATGTAGCTTCTTTATT CTCTGAGCCTATTTCAGATGAAGTTGCTTCAGAAATATCAATTCCAATTT CAGCAATTTCATGACGTTCTTCTTTCTTTGTGACGACACTCTCTTTTCCC TTGCGTCTGTTCTTACGCTTTTTATTCTGTTTCTTTACTCGCGCCTCTTG TAGAATAGACGAAGATGTCGTTTGTATTTGATTCGAATCAGGTACAACTG AACTAATAGAAGAATCATTCTGTCGTTCATTATGACCGTCTTTCGAGCCT NGACTGAACTAATAGAAGAATTACTCTGCCATTCATTATGACCGTCTTTC GAGCCTTCGTTTGATTTATCATCACCATCTATAAGTTAAGGTTAAGAAAG AAAACCTTCAGAAATAGATCAGTTTCTAATTGGTTAGGATTTCTGCTCTA AATCTACTTTAGAGGTTTTATTTTTACATAAGTGTTTCCGTTTCATATCA GACACAAATTTCATATCAGGACAGTGTCTTCCTATTGTTATATTATGTTG GTATAAGCAAAAAAAAAGTTTTTCCTTTCCTTTCTGACCAATCTTGCTGC ACATCAGTGTCAATCCAATGTGAAAAAGCTTGTGAATTAAAATTGATGAG TAAGCAAACGATATCACTCTTATTTAAAAACAAAACCTTTAAAAGTGACG ATCATAGTGGAAATCTAAAAATTGTTATGTTATGGAAATCTTCTCAGAAA CAACGCGAAGTACGAACATAAAAAATATTTATGATAAAAGTAGGGACGCT TCAACGGTAAATACCTCTTAGAATTGAGGCTCAGTAACTCGAACACACAG GGGGGACAAAAATTTGTTCGAGTTCAGGAAATTTCAAGCTATGGAGTAAA GTTTTTAACGCGTTGTTAACTGAAGGGACGAGAAAACTTTTTTGAGTTAA AGGGTCATCTGAGTTATAGAGGTTCGAGTTTAAAGAGATTCTTCTATCTA TAATTTGATTCTTGTCTTTTCAAAAGCATACCTTTAGTTGATGAAGAGTA AATAATTTCGGTCACCGTTGGCATGCTGCTCAGAAATGCACGTTCTGCAG CTTTGTTACAGATCTCCTCAATGATAGTTTTGATCTCGGACATCACTGTT GAGGATTGAGTGAATCCTGGCAGCAGGTCTTCCTTGTCATCAAACATTTC TTCTCCGTCTGTTTGAATGTCATTGGTTTGATCCAGTATTTGATTACTTT CCATAGTTTTAAGAGAGATGCTTACTGAATCCATTTCACTTTATGAATTA AAAGAATCTCGAATTTGAATTGACGGACGTCACTATTTAAAGTTGATTTG TAGAAAAATATTTGACGTCAAATAAACTTTTTCAAAAGATATTGCGTCAA AAGAAAACAACAAAAATGGTAACCAAAGTAGCGTGTAGCCATTTTAGTCA AGTGGCCTCTATAAAGGGATACGCAACCTAATTTCTTTGCTTCCCTCCAG AATTTCTATAAAGATTTGTCACCTCGATCCATGTTCTTTCCAAAAAAAAT CCGGAAAATCTGAAGGTATTATAGAAATTAGGATATATAATGAGAAAGTC TTGAGTGAGCCCATTGTGAATTTGATCTATATGAACATATAAAACCATGG AGCCTGAAGGGTGTTCTTAACTTTTAAGCCCAAAAATGTTCCTGAATGGA GATTTCAAAAAGCCGCAAAAACTGTTTAAATCGAATCTAGATCTGTTATT TCATGAGAAACACCCATAAGAAAAATTTTCACGATGCCTCGTTAACACGT TCGCTGCCGGCTACGAGTGTACTCTCTTATTGGTAGAGGCGTCAAAATAC CGGCAGTTCTTCAAAGGGTCATAAATTTTGATACAGAAAATTTGCTTAAG GCCGAGGTAAACGATTCCAACATTTCATCCAACATAGAAATTGAAATGTT GGACGAATGTTGGATGAATTTTGGAAAGGTGTTGCATCTCCTTAAAATCG TTTCGTCGCAATGTCCAACATCATTTTCATCCAACATGGGTGTTCATGTG TCACTACTGCTGTTCAATGCGTACAAAAATTATAGTCTAACAATTGGACT CTTAATATGCAGAGAAAATTCTAGCGAAAAATCGACTCTTATGGTGCAAT TTCTTGAAATTTATTTATATCTATTTCAAGGCAAGAAATGGTCAAATTTC CTAAAAATTTGCAACAAAAACTATGTTCTCATTTTTTACACACTTACAGT GCATTTTGGGAAGCCTGAAANAAATTATAGTCTAACAATTGGACTCTTAA TATGCAGAGAAAATTCTAGCGAAAAATCGACTCTTATGGTGCAATTTCAT GAAATTTATTTATATCTATTTCAAGGCAAGAAATGGTCAAATTTCCTAAA AATTTGCAACAAAAACTATGTTCTCATTTTTTACACACTTACAGTGCATT TTGGGAAGCCTGAAAAACGTACCTTTAAAGGGTCACACCTCTATGATAGA TCGCTTAACTTCAGTGCCCCCCCCTTGGTTTATTTTTCGAAAAAAAAACA TTCGAGCTAGTAGCTTCTATACAATCTTTTTATATTTGTTACGAGATTTT TCGAATTTTTGATAAAAAAACATTCGATTCTATTTAAAATGACGTCATTC GCTTTCAAATGTTGGATGTGAGCTGAGTAAACGAATCCAACATGATCCAA CACGAAAAGAAGAAGTAAATGTTGGACAAAATGTTTGATGGCGATCAAAC TCCCATCCAACACTTTTCTCCTTCTTCCAACATAATTTTTTCTTCCTTTC CGATTTTTACATTCGAGTAAACGATTCCAACATTCTGTCCAACAGAGAGA AAATGGCATGTTGGATGGAATGTTGGAATCGTTTACCTCAGCCTTTACTA TATAATACATTTTTGCAATCCAACATTTCCAATTCATTGTAGGTCGAAAT GTTGGACGAAAAGTCACGTGTAAAAATTCGAAAAGTTGCATGAAAAGTCA TTTGCGCAAAAACGTCAAACATTTTCATCCAACATGATTACGCAAATGCA TCCAACATTGAAACCAACATAAAAGTGACGTCAATCTCATTAAAAAATGC TGGGTGAAAAGTTTGACGGCGATCCAACATGATTTCCAACAACTTTCTTA AAAAGTTGCAATTTTACGACTTGCGCAAACGAACCCAACATTTGATCCAA CAATAATGTTGGATCAAATGTTGGATTCATTTGCTCCGGCCCTTAAGTCA ACTTTCAGTGAAATTCAAAGAGGTCTCTAAAGCTTTAAAATATTCTAAAA GTGTTCTTAAAAATTTTTGCCTCGAAGCCTTATGCTCTTCTAACTCTTTG TGCGTGTAACAGACAAGATGTTTTTTTGTTTTGTTTTTTATTTTTAAAAT TAGAAAATTATTTTTACAATGATGTTACTATTGCTAGCCTCGGAGAGTTG AACTAGCTTCATTATTTGGGTATGACTCTGATGTTGTTTTAGAGCCACAC CATTTGCTTGGCGATGTTAAATGATTCCAAAAGCGTTTGAAACGTCCAGG GTTTTTGTTTTTGGTTTTTAACTGTTTGATGGTCAATCGCATCGCATGTA TTTGATTGCCTTGCCATTCGACCGCTTTGTCTTGTCTCTTGATTATGTTA TATCTTTCATCCGATAATTTGACGATGTCTTCCACGTGTTTCTTCATCTG TTTTAATTCCTGAAAGTTTTAAAGAATTTCAATTGTTGAGAAGTGAATTG GATATGTGTTGTTACTTTTTACCGGGAGAGGTAGATTTTCGTGGATTCGG GTCCTATACATAATGAGTGCTACGATCGAAGGAACTTATTTATTTTCATT CGACTCACGAAATTGTGGGATTTTTCCCCAAGGACTCGATGTAAAAATGT TGTAACTAATTGTCCTATTGCTGTCCTGTCTCCCAGTAATGGATATTAAA TGGAACGGTACAATGTGGTATGAAGGTTTTTTTATTAAAGAACTGACTGA TATAGATTACTTACCTCTTTCAACAACTTGTTTTCGTCCTCAAGTTGCCT AACGTCTATTTCAATTGTAGGACTGAATGATGTCGATGGTAGGGATTCTT CTCGTGCATCATCCGGGTTCTCAGCCGGCAAGATGTTGAATATACTTTTG GACATGGCTGCTAAGTCTTGAGCTCTTTTGAAAGTATTTCGACTGGACTT AAATTGCTGTTGTTGGGTGGTGGTGGTGGTGGTGTCTTTGGGCTTATGAT TGACATCAAGAACCGCCCAGTGTTTAGAAAAACCTTCTTCAGTGTTGTTA ACCTGAGCACTACCTCCTGAGAGCATTTCAACCATTTCGCCGGGTGCTCC AGATTTACTCATATCCTTGACAACAACACCGTCATTTGTTTTAGCAATGT TTTCATTACAATCATTAGCAATTTCAGCTGATGTTACCCGTTCTATTGGA ATGGTATTCGGTACGAATGGTTTGGTTGATAGTGTTTTGCGAGTTTCAGT GTCTTTAATCTGTGTACTGTCAACTGGCTGGTTAACGATGGATAATGGAA TGGTTTTTGTTTTCTTTACAAAGTTTTCGATACTTACAGATATCACTTCG TGTGATATCTTTTGCGCAAAACAGCAAAGGATGTCAGGAATAGCCTCTTC AGAGTTGTTATGAGATGTTATGGTTATTTCAGTTTTAATTAAGGGTGCCT GGACCTGAACAACTGCTGCATCTTTAACGTTCACGTGATTTAAGCTAAAT GCTGCTTTCAAGTCGGTTAGATTTACGCAGGTTTGCCTCCTGTATTTACG GTGATCGAACGATTTTTTAGTAACCGTCTCAGTAGCGGTTTCTTTCAATT TCATTATTTGATCTTGTATATCAAAGCGCATCGTGTCGGCTTTCATGTCA AAGGTCTTAGTGAGTTCATGTTCTTTGCCGTCTATTTTATTTACCAATAT AGAGCCGTCACCAAGTTTTTGTTTATCTGAGTGCAGTTTTTCAAAATGTA CAACTGGTGTAGAGCTTTTTACTTCATAGCAAGTTGTTGTTTGGGCTTGA TTTGTGGTATCGCTCTCATCCATCAAGCGATGCGCCGCTTTCAAATCGGC TAGGTTCACACAAGTTTGTCTCATATTCTTCCTGCGTTTAAAAGATGTTT TTATAACCTCTTTCGCTGGTTCACTTGGTGAATTCACAGTTGAGGAATCC TGATCGTTTTTCACAACTTCACCAATCACTGTATTTTCTTTTGGTGTTAC TATTCGCTCCTTCGCAGCGGCGGTCTGGTCTTTAGTGTCCGAACAGTTGA ACAGAACTTTCTCCGAATCACTTTTGATATCTGTATCTTTGCCTGATGTG GATGCTTTCCCCTTCGCACTACCAGACTTTCTTCTCTTCTTTTGTTTCTT CTTTTGCTTCTTCTCTCTCGCTGTTTGCAAGATTGAAGAAGAAGCAGTTG TTAATTGCTCCTTAGATTCACCTGCTGATGAATCACACTCTGTATTATTG TTGTCATCGCCTGAAACAAAAATAGAATGTAAAGCTATCCTTTTAAAGTC TATTTGAAAATCAGAATCTAACCATCGCAGAATAAGCACATACTTTTAAG CTCGTTAATGAAGCGACGACGACATCGTCTACACTGGATCTCGATTCTTA ATCAGTGAAAAATCGTAGTAGTTCTATGTAGTTTCAAAGTCATCTTACCT CCATTTGACATAGAACTTTCAAGTTCTGTTACCGAAGACGCACTCGATTC CAATGTAAGCTCTGCAGCTTTATCACAAATTTCCTGCACGAGTATTTTGA TTTCCGCTCCAACGCTTAATTGTAACGCTTCGTTCATTGTGGCGTCGCGT AGGTCAATTTGAACGTCATTTGCTTCAACCGCTATCGACTCTCCATCGTG GATCGCATCCATAGTTTTCATTACTGGAGTAGAGACGTCTTTCTCTGAAT TCATTTTTTACGAATAAGGAAAATCTCTTATTCATTTCTTTTTTTCGCTA CTTGTATACTTCATATAAGAATTTTTGACGTCAAATCATTCAATTTTCAA ATTTGACAACGCATAACTTCAAAAGAAAGGAATCACCATAGCAATTTGGT AACCTGGTCTATGTCTCAAAATGGTAGATATTTTGTATCTAAGTGCTTTC GCTGTGCTTCAAAATGGTAGCTGAAAATTGCTGAAATCTGCCTACTTACC TCTGTCTAACTGAAGTATTTTAAAACTGTTCCTTTCTTTATTATCGTAGT TTTGTTGTTTACACAAGTAGCGAGTGCAAATGCAGGACTCATTGGAGAAA TAACATTTATAACAGTCGGCCTACTTCTGACCTCTCTTCGACCGTTTACA TACTTTAATGGGGTAAATTTTTAGCGGGAATTAATTTCGCGGAGGGTTCT TTTCAACTTCCCAATGAGATTTAATTTCACAGTTGACACCCAAATCCGCA AAATCCTCAAAATTTACAGTTGCCACTCTCTAATTCGAACTTCAAATGAT GAAGACTTTTTCTTCGAATCAGAGAAATATTCGGATTAAAGAGATTATAG ACAATACTTTCTAGCTACGGTGACCAATGCTGAAGTTCGAATTACAGGAA GATTCGAATTATAGATAAAATTTATAAGTTTTGATTCCAATCAAAGATAG CTGGCTGATTCTTTAGGGTAGAATGGAAGATTCAAGATTGGTTCAATAAG GCTTAGAATATAGCCTGGAAGTCTATAAACCCCTCCCGATTTGAAATATT GGAATAAATCTATCAATTAGCCCAAAAGTGACTTTCTCGCCCGAACTTTA AATTGCTTAAAACGAGGAATTTTTAACCAAAATTCTCAATATATTTTGAC CGAGAGTGCATATAAGAGTTAAAAGAATAAAAATAAAAATACAATACACT TCTTCATTAGGGTGAACAAAAGCAGCGCAACAAGCCTCCAAAAGAGACGC CGTCAGTTTATTCCGTCACTTCTCGACCGTTGACGGCGTCACGGGAATAC GGCAGTCGTGTTTCGACGGCGTCTGCTAACGAAATGAATCGCTTACAACG TAACATGAGTCGAGGAAGGAAACGAAACGAAGACTTGTTGTACTATGACT GATTTGATTTGACCAACAATTTATTTTGATTGATTGATTCAAAAATATAT GCGTGGATGACTTTTGTTTGTTGTGCCAAGTGGGACTTACGTATTGCAGT CGTTTTACGTCTTTCGTTCATTACGTAATCAAGGACAAATTATGCTATGT ATAATAATAATGATCCTGAGCAAAAAATGTAACATTTTTTATCTATAAAA CGTTTGGATTTCCATGGACCAATGGCTTTCAAAGTTTGAATATTTCCAAT CATTATACAGTATTTCGCTTTCGTAACGGGTTAAAGAATTTCTATTTATC ATGAATTTTACCCTTTATATTACAATGAAGTAAACACAGTCGCTCTCGTG TTGTCTTCTGACCAGCCACCAGAACCGTTGGAAAACCAACGGATCCGGT

Coding sequence (CDS) from alignment at sc0000001:1989004..2000952-

>TCONS_00000228 ID=TCONS_00000228|Name=TCONS_00000228|organism=Clytia hemisphaerica|type=CDS|length=1458bp|location=Sequence derived from alignment at sc0000001:1989004..2000952- (Clytia hemisphaerica)
GGTGAACAAAAGCAGCGCAACAAGCCTCCAAAAGAGACGCCGTCAGTTTA
TTCCGTCACTTCTCGACCGTTGACGGCGTCACGGGAATACGGCAGTCGTG
TTTCGACGGCGTCTGCTAACGAAATGAATCGCTTACAACGTAACATGAGT
CGAGGAAGGAAACGAAACGAAGACTTGTTGTACTATGACTGAGGAGAAAA
ACTTGGGGTTTCTTGCAGATTATGACCAATACATGTCTTCTTTAAATTTC
AACCCTGAAAATCAAGTTTCAAATCGACCATACCTTTCATCAAACACATT
GTTAGCGACACCAGCTACGTCCAGTCAATACCATTTACAATGTGTTCCAA
AGGAGCACAAAGAGAGGGTGAAATCAGCACCACCTCGTACAAGAACAATT
CGAGATTACCAGAAATGCAATATTGTTAAGGAAGAAATGAGATGGGAGGA
GAGATGTAGAAAAGAATCAACTTTACAAAAAAACTGGGTGAACAAAAGCA
GCGCAACAAGCCTCCAAAAGAGACGCCGTCAGTTTATTCCGTCACTTCTC
GACCGTTGACGGCGTCACGGGAATACGGCAGTCGTGTTTCGACGGCGTCT
GCTAACGAAATGAATCGCTTACAACGTAACATGAGTCGAGGAAGGAAACG
AAACGAAGACTTGTTGTACTATGACTGAGGAGAAAAACTTGGGGTTTCTT
GCAGATTATGACCAATACATGTCTTCTTTAAATTTCAACCCTGAAAATCA
AGTTTCAAATCGACCATACCTTTCATCAAACACATTGTTAGCGACACCAG
CTACGTCCAGTCAATACCATTTACAATGTGTTCCAAAGGAGCACAAAGAG
AGGGTGAAATCAGCACCACCTCGTACAAGAACAATTCGAGATTACCAGAA
ATGCAATATTGTTAAGGAAGAAATGAGATGGGAGGAGAGATGTAGAAAAG
AATCAACTTTACAAAAAAACTGGGTGAACAAAAGCAGCGCAACAAGCCTC
CAAAAGAGACGCCGTCAGTTTATTCCGTCACTTCTCGACCGTTGACGGCG
TCACGGGAATACGGCAGTCGTGTTTCGACGGCGTCTGCTAACGAAATGAA
TCGCTTACAACGTAACATGAGTCGAGGAAGGAAACGAAACGAAGACTTGT
TGTACTATGACTGAGGAGAAAAACTTGGGGTTTCTTGCAGATTATGACCA
ATACATGTCTTCTTTAAATTTCAACCCTGAAAATCAAGTTTCAAATCGAC
CATACCTTTCATCAAACACATTGTTAGCGACACCAGCTACGTCCAGTCAA
TACCATTTACAATGTGTTCCAAAGGAGCACAAAGAGAGGGTGAAATCAGC
ACCACCTCGTACAAGAACAATTCGAGATTACCAGAAATGCAATATTGTTA
AGGAAGAAATGAGATGGGAGGAGAGATGTAGAAAAGAATCAACTTTACAA
AAAAACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000127XLOC_000127Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000228-proteinTCONS_00000228-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000228-exon-sc0000001-1575043694:2000629..2000952TCONS_00000228-exon-sc0000001-1575043694:2000629..2000952Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1575043694:1998866..1998905TCONS_00000228-exon-sc0000001-1575043694:1998866..1998905Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1575043694:1989004..1989592TCONS_00000228-exon-sc0000001-1575043694:1989004..1989592Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1510915933:2000629..2000952TCONS_00000228-exon-sc0000001-1510915933:2000629..2000952Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1510915933:1998866..1998905TCONS_00000228-exon-sc0000001-1510915933:1998866..1998905Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1510915933:1989004..1989592TCONS_00000228-exon-sc0000001-1510915933:1989004..1989592Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1491911889:2000629..2000952TCONS_00000228-exon-sc0000001-1491911889:2000629..2000952Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1491911889:1998866..1998905TCONS_00000228-exon-sc0000001-1491911889:1998866..1998905Clytia hemisphaericaexon
TCONS_00000228-exon-sc0000001-1491911889:1989004..1989592TCONS_00000228-exon-sc0000001-1491911889:1989004..1989592Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1989004..2000952 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.4637 43.3831 40.3321 40.5254 63.502 46.7664 29.1367 30.134 32.4813 29.7683 28.4243 33.4321 9.12578 9.44917 7.3728 6.49887 10.5684 11.8314 11.1896 9.44511 14.3116 15.6428 34.492 32.2662 13.8646 16.46 13.2885 13.0582 16.5024 19.2082
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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