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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000173 ID=TCONS_00000173|Name=TCONS_00000173|organism=Clytia hemisphaerica|type=transcript|length=316bp
gaaaatagggaaatttggacgaacgtactttttgaatgctcCCTTATCCT
ATATAATATACACTAAAATTGGCTATAAAAGCTGGGCTAAACCATTGCCA
ATTAACCCCCCTTCTTTGCGTTTAAGAATGACATCGGACTTCGAACGTGT
CTACCAACAGTATTGTCAATGGACCAAGCAAACTATCATTCATTCTCAAA
TGGAATTTTCATCTGGGGGTAATATTCGCTTTGAAAAAGGAAGTTCCGCT
GATGTATGGTACAATTCATGTCAGGACTTAATCCAAGCCCGATTCTCCCC
ACAAGAGTTTAAGGTA Run BLAST on NCBI transcript from alignment at sc0000001:697608..700283- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000173 ID=TCONS_00000173|Name=TCONS_00000173|organism=Clytia hemisphaerica|type=transcript|length=2676bp|location=Sequence derived from alignment at sc0000001:697608..700283- (Clytia hemisphaerica)
GAAAATAGGGAAATTTGGACGAACGTACTTTTTGAATGCTCCCTTATCCT
ATATAATATACACTAAAATTGGCTATAAAAGCTGGGCTAAACCATTGCCA
ATTAACCCCCCTTCTTTGCGTTTAAGAATGACATCGGACTTCGAACGTGT
CTACCAACAGTATTGTCAATGGACCAAGCAAACTATCATTCATTCTCAAA
TGGAATTTTCATCTGGGGGTAATATTCGCTTTGAAAAAGGAAGTTCCGCT
GATGTATGGTAAGTGGGTTCGAATTTTACTCTTAGGTACTTCATAAACAG
GGGGAGAAGAGATTGAAAAGATCTTCAAATTTTAATAAACGTGTGGAAGG
GGTTGATCTAATTGCCAGGGGGTTAGAAATTGTACCCCTAAAAACCCTCC
AAATTAAGGTAATTATTGAAAAACAGGCTTTTTAGAGAAAAATAAGGCAC
TATTCTTTTGATAGCTGATAGTATTTTCAAAAATTAAGAAGGGGGGGGGG
CTGGTGGTGAAAGTCGAAAAATAGGTTGGGTAGTTTATAATCATAGTATG
AATTGTACCACATTCCTCGCAAAGAAATACAATTAAGGAGGTTATACAAG
TGCTTTTTCAAAGAAAAGGAAAATATTTTCAAAGGCAGGGTACAATTCTT
TGTGAAGGGGTGTGGCAAAAAGGAGGCCTCCAGTGGTTTAAGTGATTGTG
TGATTTCAAGAAATGTGATGCTATCGTAATTGATAAAGCCTGTCTCAAAA
TAATTTGCAGTTGAGACAAAAAATGGCTGTAACTTTTGATAGAATTTGAA
AATGGTAATTATACCACATTTCTACAAGAAGTTGATTTTTTTCTTCTTCA
ATTTTCATTTTCATTTTTCTTTATTTTTCAATTTTTTTTGCTTGATAATA
TTTCACTCACAATTATCTTTTCAACAAGCACAAAATCGCAACTTCATTCA
AATTCTATCAAAAGTTACAGCCATTTTTTGTCTCAGCTGCAAATTATTTT
GAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAATTATCTTTTCAACAAGCACAAAA
TCGCAACTTCATTCAAATTCTATCAAAAGTTACAGCCATTTTTTGTCTCA
GCTGCAAATTATTTTGAGATAGACTTTAGGACGATTCTTTTGGGTAATGT
TGGGATAATGAGAGAATATTTGTAGCGTGGTTCGCATGATTAGAATTTTC
AAGGTACATCGGGGGTTTCGTAAAGGAGAAGAGAAATATATATGTGAAGA
AATTCAAAGAATTTCTGTCCACTTATCTTCTTTCAGGAGATTTGGGTGAG
AGAGCAGCATATGCATACTGCACCCTGGCTTGGTAGATCGAATTACCTAG
CATCTTACGCCATAAAACTAATTGTGGCGCAGACTGAAAGAAGAAGTGGA
CAGAAGGGAAATTCCCTGGTGAATTCTGTGAATGACTCCTCTGGAGTCAA
GCTCTGAAGAGAACCAGGAGGGAGGAAAAGCTCGACACTGCATGGTCTCA
AAAAAGAATATATATATGTGAAGAAACTCAAAGAATTTCTGGCCAACTAT
CTTCTTTAAGGAGATTTGGGTGGCAGAGATTTATGAAGGGAGGGTAGATG
GTTGACCTCTATCTTGCGTACCATAATGTCGTTATTTAATCCGTGCTTCT
TGATTAAAAGTCAAGTAATTGTCTCATAAAAACGGTTATATAAACGTTAA
AAACTACTTTTCTTCTAGGTACAATTCATGTCAGGACTTAATCCAAGCCC
GATTCTCCCCACAAGAGTTTAAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000173-exon-sc0000001-1575043694:700026..700283 | TCONS_00000173-exon-sc0000001-1575043694:700026..700283 | Clytia hemisphaerica | exon |
| TCONS_00000173-exon-sc0000001-1575043694:697608..697665 | TCONS_00000173-exon-sc0000001-1575043694:697608..697665 | Clytia hemisphaerica | exon |
| TCONS_00000173-exon-sc0000001-1510915933:700026..700283 | TCONS_00000173-exon-sc0000001-1510915933:700026..700283 | Clytia hemisphaerica | exon |
| TCONS_00000173-exon-sc0000001-1510915933:697608..697665 | TCONS_00000173-exon-sc0000001-1510915933:697608..697665 | Clytia hemisphaerica | exon |
| TCONS_00000173-exon-sc0000001-1491911889:700026..700283 | TCONS_00000173-exon-sc0000001-1491911889:700026..700283 | Clytia hemisphaerica | exon |
| TCONS_00000173-exon-sc0000001-1491911889:697608..697665 | TCONS_00000173-exon-sc0000001-1491911889:697608..697665 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:697608..700283 - |
Blast
The following BLAST results are available for this feature:
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