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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000164 ID=TCONS_00000164|Name=TCONS_00000164|organism=Clytia hemisphaerica|type=transcript|length=576bp
aaaacatcatgcatgtgaaattgttttgtttagtATTCCTGATGCTTGCT
TTTGTGATGACAAATCGTGATAGAGAAAGCAGCCAATCAAACAAGATGGT
AGACGGAGCACCGAACCCTGACCCATATCACGACGAATTTATGGAAGACA
ATGAAATATTGCACAGAAAAGGTATACAAATCGCTGCATCTTATAGACGA
AGAGGAGAAGGCGGCAAGAAATGAAGCAAATACAAGGAAtattttaaccc
tttaactgccgttcgTTTTATTTAAGGGTTCGATctatttgccagatgtc
ggcatatgccgttATGAGCGACCAGGAGTTTACCATCATATTTAGCTTTa
ctttctgaaaaatatcagaaGTATAAGTGATATGCATttactttgagttg
aaaaatgtataattatgaaaatcatcttcgaaatatattttgattattCA
ACAGTGCTATTTAATGAAATCTAGTTCAAAATCGAACCTTCAAAACGTAA
AAAAACCTCTGGCAAATAGGTCAAGAACTCTCTTTTCGGCAAATGCCGAC
ACCGGCAAAGAAGTCGAAAATGCTCT Run BLAST on NCBI transcript from alignment at sc0000001:530023..531841- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000164 ID=TCONS_00000164|Name=TCONS_00000164|organism=Clytia hemisphaerica|type=transcript|length=1819bp|location=Sequence derived from alignment at sc0000001:530023..531841- (Clytia hemisphaerica)
AAAACATCATGCATGTGAAATTGTTTTGTTTAGTATTCCTGATGCTTGCT
TTTGTGATGACAAATCGTAAGTGTTATTAATATCGCTGTTAATAAGCTTG
ATCACAGAAAAGGATTTATCTGCAAAACGCCTACACGTGTTTTGTATAAG
AACATCCGAGATTTTTTAAGCCTTCAGATGAGCTACATTACATATTCCTG
GTTCTTCATATAAACAATGTATTTTTCCCTCTGATTGAAATGGGGTAAGT
GAAAAATTATATTTTCCTTAAAAATTTCAGGTGATAGAGAAAGCAGCCAA
TCAAACAAGATGGTAGACGGAGCACCGAACCCTGACCCATATCACGACGA
ATTTATGGAAGACAATGAAATATTGCACAGAAAAGGTAAATATTCAGCCT
ACTTTAAAAAGTTTCCCATCCATTTTCCTTTTATCTGATATTTTGATGGT
GGATTGGCGGCCGCCTACGCTAGAGCTCCGAAAAAGCGGGCCAATTTCCC
ATTGGAGAGGAATGATAGTCAGCCCTTGATGTGCCGCATCCCCAGTCGGA
TTCAACTACCCTTCCTTGCGTGTAAACCTAAAGATATTTTGGTTGGACCC
GCCAATCCCCGAAAACGAGGGCTGGGCTACCTTCATTTTTCAACCGACCA
ATAACTTTACAAAAACGTCAAAAAGTTTTCGCTCATGTCGCGCGAAAGTG
GATACAGGCCTTTACAAATAATAGGCGACAGTTATATCACTTTAGAATGT
TAGATCAATTAAAACTGTTCAAAAATTACACATTCACATTTTTTTATAAG
AACAAACTATATAAGATCATAAGGCTTTGCTGGCCAAAATGTTAAGAGCA
AGTTAAGAACATTTTAAGGATTTGTGGACTCAAAAACACCCTATTTCTTA
TGTAGATGGTCAAAATAAGAACATGTATAGAACATTTTTTGGGCTTAAAA
CTCAAAAAGTTAAGAACATACGAAGGCTTCAAAAATTTTGGATGTTCTTA
CAAAGAAATTACATATACCGGGTGCTCCATGACGTGGAAAATAAGATGGA
GAAACTGTTGGCAAGATATAAATAAGAAAAAAAGAATAAAAAAAACAATA
AAATTGTGTTCTTGTCATTTTGTCTTATTTATTTCAATGATTTTTTGAAA
TTTCGACATTAAAAAAAAGTCAGTTTTTTTTAAAATAACTTTCGAACTAC
CTTTCCAAACCTAATGTATAATAGCTAAAAATTCAAGTTAGAGCATCCTC
TATACAATAAAAAAAGAATGAACAAAAAATTTAAATCCTGATGCTCACAA
TATCTCGACAAATCTGTATACTTTTTTTTGGTGCACCCGGTATACTTTTT
AGGGATTCCCTAAAGTTTCTTGACCTATTTGGAATAACGGTACATTTCCC
TTGGTTCGTTTTAGGTATACAAATCGCTGCATCTTATAGACGAAGAGGAG
AAGGCGGCAAGAAATGAAGCAAATACAAGGAATATTTTAACCCTTTAACT
GCCGTTCGTTTTATTTAAGGGTTCGATCTATTTGCCAGATGTCGGCATAT
GCCGTTATGAGCGACCAGGAGTTTACCATCATATTTAGCTTTACTTTCTG
AAAAATATCAGAAGTATAAGTGATATGCATTTACTTTGAGTTGAAAAATG
TATAATTATGAAAATCATCTTCGAAATATATTTTGATTATTCAACAGTGC
TATTTAATGAAATCTAGTTCAAAATCGAACCTTCAAAACGTAAAAAAACC
TCTGGCAAATAGGTCAAGAACTCTCTTTTCGGCAAATGCCGACACCGGCA
AAGAAGTCGAAAATGCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000164-exon-sc0000001-1575043694:531776..531841 | TCONS_00000164-exon-sc0000001-1575043694:531776..531841 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1575043694:531457..531561 | TCONS_00000164-exon-sc0000001-1575043694:531457..531561 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1575043694:530023..530427 | TCONS_00000164-exon-sc0000001-1575043694:530023..530427 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1510915933:531776..531841 | TCONS_00000164-exon-sc0000001-1510915933:531776..531841 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1510915933:531457..531561 | TCONS_00000164-exon-sc0000001-1510915933:531457..531561 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1510915933:530023..530427 | TCONS_00000164-exon-sc0000001-1510915933:530023..530427 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1491911889:531776..531841 | TCONS_00000164-exon-sc0000001-1491911889:531776..531841 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1491911889:531457..531561 | TCONS_00000164-exon-sc0000001-1491911889:531457..531561 | Clytia hemisphaerica | exon |
| TCONS_00000164-exon-sc0000001-1491911889:530023..530427 | TCONS_00000164-exon-sc0000001-1491911889:530023..530427 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:530023..531841 - |
Blast
The following BLAST results are available for this feature:
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