|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000145 ID=TCONS_00000145|Name=TCONS_00000145|organism=Clytia hemisphaerica|type=transcript|length=290bp
CTCAGCTGAGATCGTGTGGTGTGGATTTATTTTTGGGAAATCTGAACACA
AGCTACAACATCTGCTTATTTGCTACCTACCTACCCTGTTCATTCAACTT
CTACTTGACACTTCAAAGACTACAAACATCTTCTCTTCGTCATTCTGTTC
TAGccctcaaaaataaaaatgcctAGAAAAGCCATGAAATGCATTGTTGA
AGTTGATCTTCATGTGACAACCTGTCCAGGAACATTTCTACGAGACTATG
AATATGTATATCTTCATATGGAAATGCTTGGGCTTGAAGC Run BLAST on NCBI transcript from alignment at sc0000001:194465..196828- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000145 ID=TCONS_00000145|Name=TCONS_00000145|organism=Clytia hemisphaerica|type=transcript|length=2364bp|location=Sequence derived from alignment at sc0000001:194465..196828- (Clytia hemisphaerica)
CTCAGCTGAGATCGTGTGGTGTGGATTTATTTTTGGGAAATCTGAACACA
AGCTACAACATCTGCTTATTTGCTACCTACCTACCCTGTTCATTCAACTT
CTACTTGACACTTCAAAGACTACAAACATCTTCTCTTCGTCATTCTGTTC
TAGCCCTCAAAAATAAAAATGCCTAGAAAAGCCATGAAATGCATTGTTGA
AGTTGATCTTCATGTGGTAAGTTCTTTTTTACATTTAAAACTTTGATAGA
TTCTCTGTTATTTTCAAGCAAAATTGGTTTTGATTAATTGTTGATTAATT
TTAGCAGAGTTTAATTCAAGCATAAGTCAATTTAAGTCTATAAGTCCAAT
CCCACAAGACGGCAATCACAATGTAGAATGGCTAAACTTTCTACTTTCTC
TCTGGTTGTTATTCCCGGGGAAACTTTCTTATTAGTCAGTCAGGGATATG
TTCAGATTTGCTGTTTGTCAATTGGTTAGTCAGATCGGTTAAATAGACGA
TAGGTAATCGGTTAAATAAAGGGTCATTGTTGTTATGCCTAGATACAGTA
CCTCAGAGGTAAATAATCGTACCAATAGAATTGTATTTTTAATCTAACTT
GATCAAGTTTTGTTGCCCTAATGTTTGATAGTTGGGTTATCAAACTTAAA
TCAAATACTAGCTAATTCTCAAAGAGACCTTAAAAATAGTTCAATTAGTT
TGTTTATTGATAAACTTCATCAAATATCGAACATATATAATCTGCAACTG
ACGCAATGCAAAAAATCAGCAATCTTAGTATTGATTGATCTTTCAAAAAG
ATTACATCATTGACGCAAAATAGTCAGCCTACTTTTTTTAGCACTGTTGG
TGGCAGACTTACCCCCTCCATTCCGCTTACAGATTGTATAGAAGCTTTTT
TGGTGGCCATCAAAAAAATGCTCTGTTCGTGTCGCAATGGGTGTTAAAAA
TGCATGCGGGCGGACAGGCGGTCGAAAAAATTCCTGTTTTTTTTTTAATT
AAACCAGTAATTCGGGGGCGGGTGGTGACGCGAACAAAACATTTTTTGAT
GGTCGTCAGAGCAATTAAGGAAAAAGCTATACTTTAAAAGAACATTGATT
TTCCTGGATTTTTTTCCGCTTCTCTCATGCACCGGAAAATCACCGAAAAA
TATGATGCGGGCGGTTGACGCGAATAGAACAATTTTTCGATGGCCGCCTT
TGTCATCCAGGGTTTTGTCAAATTTGTCAAACATTTCTTCTTGTCAAACT
TTGTCAAACTTGATGTTTTTAGCCAAACTTAATAACTCGCATCTTAGCAA
TTTTTGAGAATTTTGATTAATGAATTTAAATTAATTTTTGTTGTTCAGTT
AAGTTCAAGAAAGTTCTTTTAGTTCTGTAATCAAATTGTTTGATTGTATT
ATCAAAATAGAAAGTGCAATTTGAAGGAAAACTACAATAAAGGTCATAAT
ATTGAGAAAGTCGATTTTGGGCTATCTCTTTAATTTAATCGAATATTTCA
ATTCGGAAGGGGTTGGCAGACTTACAGGCTATATTTTGAGCATTATTTGA
CTATTTTTGAACTTTTGAACCCTCAGATACTAAGGTCCTAAGTCTTAAGT
CTCATGATAAAACTCAGAGTTAAAACTCTACCCTTCCAACCTACTTTAGA
GCACTTGCAAATCGCTTGTGGTTCAAAAACTTCCCGGTGTATTTCTCTTT
TTTCTCAAATATTATATGACCTTGATTGTAGTTGTGTCGCTATTTTTGCT
TCAAGGTGATTTCTATAACTCAAAGAATAAGTTAAATTATTTTTATTTCT
AGTTCTATAAATTTTAGTCACATAATACACTAACGTACATTATCATGATA
TTGACATTTTATTTTATTTCAATCCTTATTCTAGCAGTAGGCTTTTCTAT
CTTCATATTTCCGAAGAAAACAGAATTTGCCGCAAAAATTCCTTAAATAG
AAGAGGAATTTACATTTTAAATATTTTCATTTAAGATTTGGTGCAAAAAA
GGGAAACTAGAAAAGCTTGCAAGCTAAACTAAAATGAGTAATTATAAACT
CCAACCAACTTCATTATCTAAAAATATAGCACATGCATATTTTACTAATC
GTATGCATCAATCTGTTATAGTTTTAATGCTGGAGTTTAAAATTATTCAA
TTCGTAATACATCATGATTAAGAAAATATCTTTAGTAGTATGTCAGTTTA
TTTATTATCACAAATAAGTGCCAACAATTGTTTCACTGTATTTAATGATA
TATAATCATGTACTGTATTCCATTGCTTGTTACTTTTCAGACAACCTGTC
CAGGAACATTTCTACGAGACTATGAATATGTATATCTTCATATGGAAATG
CTTGGGCTTGAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000145-exon-sc0000001-1575043694:196613..196828 | TCONS_00000145-exon-sc0000001-1575043694:196613..196828 | Clytia hemisphaerica | exon |
| TCONS_00000145-exon-sc0000001-1575043694:194465..194538 | TCONS_00000145-exon-sc0000001-1575043694:194465..194538 | Clytia hemisphaerica | exon |
| TCONS_00000145-exon-sc0000001-1510915933:196613..196828 | TCONS_00000145-exon-sc0000001-1510915933:196613..196828 | Clytia hemisphaerica | exon |
| TCONS_00000145-exon-sc0000001-1510915933:194465..194538 | TCONS_00000145-exon-sc0000001-1510915933:194465..194538 | Clytia hemisphaerica | exon |
| TCONS_00000145-exon-sc0000001-1491911889:196613..196828 | TCONS_00000145-exon-sc0000001-1491911889:196613..196828 | Clytia hemisphaerica | exon |
| TCONS_00000145-exon-sc0000001-1491911889:194465..194538 | TCONS_00000145-exon-sc0000001-1491911889:194465..194538 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:194465..196828 - |
Blast
The following BLAST results are available for this feature:
|
