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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000136 ID=TCONS_00000136|Name=TCONS_00000136|organism=Clytia hemisphaerica|type=transcript|length=527bp
TGCAAGCAGCGGTCTGTACCAAGGTAGCGTGGCTTGACTCGAACTGGAAA
CACCAGGTTGTCCTCAGTCGCAAAACTTGAAGCAGATTTCAAAGGAATTC
GGATGTAGATAGAATCTTACTGTTGCAATCGAAGTCTTTGCAGATAGAGT
CGAAGCAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCAAGGTAGCGTG
GCTCGACTCGAATCCAACCAATCTCCGTTGACCAAACCAANNTTGATCCA
ACAACCAGATCTCCTTTGATCCAAACCAAGAGTCGAAGCAGTTGTCCCGA
CGTGCAAGCAGCGGTCTGGACCAAGGTAACGTGGCTTGACTCGAACCAAC
CagagaataagaaaatataatcTTACTCTTTAACAAGAAAGCAGCATTCT
TCTTTCATCATTATGCAGCTagtaattttgaaatctttatgtAGAGAATG
AGTGTTGTGAGGTTGTTCAATGATTTGATATAAGTTTCTTCTGttaaaaa
accatttcaaaatgTGGCGTGAGCTAN Run BLAST on NCBI transcript from alignment at sc0000001:2858767..2859594+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000136 ID=TCONS_00000136|Name=TCONS_00000136|organism=Clytia hemisphaerica|type=transcript|length=828bp|location=Sequence derived from alignment at sc0000001:2858767..2859594+ (Clytia hemisphaerica)
TGCAAGCAGCGGTCTGTACCAAGGTAGCGTGGTTTGACTCAAACTGAAAA
CACCAGGTTGTCCTCAGTCGCAAAACTTGAAGCAGATTTCAAAGGAATTC
GGATGTAGATAGAGTCTTACTGTTGCAATCGAAGTCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAGCAGCGGTCTGTACCAAGGTAGCGTGGCTTGACTCGAACTGGAA
ACACCAGGTTGTCCTCAGTCGCAAAACTTGAAGCAGATTTCAAAGGAATT
CGGATGTAGATAGAATCTTACTGTTGCAATCGAAGTCTTTGCAGATAGAG
TCGAAGCAGTTGTACCGACGTGCAAGCAGCGGTCTGTACCAAGGTAGCGT
GGCTCGACTCGAATCCAACCAATCTCCGTTGACCAAACCAANNTTGATCC
AACAACCAGATCTCCTTTGATCCAAACCAAGAGTCGAAGCAGTTGTCCCG
ACGTGCAAGCAGCGGTCTGGACCAAGGTAACGTGGCTTGACTCGAACCAA
CCagagaataagaaaatataatcTTACTCTTTAACAAGAAAGCAGCATTC
TTCTTTCATCATTATGCAGCTagtaattttgaaatctttatgtAGAGAAT
GAGTGTTGTGAGGTTGTTCAATGATTTGATATAAGTTTCTTCTGttaaaa
aaccatttcaaaatgTGGCGTGAGCTAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000136-exon-sc0000001-1491911889:2858767..2858789 | TCONS_00000136-exon-sc0000001-1491911889:2858767..2858789 | Clytia hemisphaerica | exon |
| TCONS_00000136-exon-sc0000001-1510915933:2858767..2858789 | TCONS_00000136-exon-sc0000001-1510915933:2858767..2858789 | Clytia hemisphaerica | exon |
| TCONS_00000136-exon-sc0000001-1575043694:2858767..2858789 | TCONS_00000136-exon-sc0000001-1575043694:2858767..2858789 | Clytia hemisphaerica | exon |
| TCONS_00000136-exon-sc0000001-1491911889:2859091..2859594 | TCONS_00000136-exon-sc0000001-1491911889:2859091..2859594 | Clytia hemisphaerica | exon |
| TCONS_00000136-exon-sc0000001-1510915933:2859091..2859594 | TCONS_00000136-exon-sc0000001-1510915933:2859091..2859594 | Clytia hemisphaerica | exon |
| TCONS_00000136-exon-sc0000001-1575043694:2859091..2859594 | TCONS_00000136-exon-sc0000001-1575043694:2859091..2859594 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:2858767..2859594 + |
Blast
The following BLAST results are available for this feature:
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