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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000110 ID=TCONS_00000110|Name=TCONS_00000110|organism=Clytia hemisphaerica|type=transcript|length=270bp
ACAATGCGGGGCAAACATTAGCATTACATGATTGTTGCGTTACAGGTCCC
TCTAAACCTTCGCATGATGAGGAACTGACCACACTTTGATCGTCTTCACG
AATACATTGTAAGAGCCGTGTTTGAATACCTCCACCGCAAGTCTTGGAAC
AGGATCCCCATTCACCAGCAATCAATTTGAAGGTCGGTAATGGAACAGTG
GTGTCATTGTCAATAGGGGTGTAAAAGGTCCACTCAACCCCTTTGGATGT
CTGAGCGTAATAATTGACCA Run BLAST on NCBI transcript from alignment at sc0000001:2050508..2051826+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000110 ID=TCONS_00000110|Name=TCONS_00000110|organism=Clytia hemisphaerica|type=transcript|length=1319bp|location=Sequence derived from alignment at sc0000001:2050508..2051826+ (Clytia hemisphaerica)
ACAATGCGGGGCAAACATTAGCATTACATGATTGTTGCGTTACAGGTCCC
TCTAAACCTTCGCATGATGAGGAACTGACCACACTTTGATCGTCTTCACG
AATACATTGTAAGAGCCGTGTTTGAATACCTGTATATTGATTGGAGGGAA
TTTAGTGGTCAATGCAAGGATTTTCGTCTGAgatggaaaatggattttac
acagtaaattagcacatattctttaaatttTGGCATATATGTCGAATAAG
ACTGAAAAGCTTCTTTATATGCATTGGAACCTACATAATTCGAACAAGTA
CGGgtaacacaaatttgttcgatttaaggaaATTTCACCGAGTTACCGGT
TTATAAGGTTTATAAGTCATTGTCAACCGACGAGACCGGTTTCAAGGTTT
AACTATTTGAGttaggagacattcgagttatagaggttcgagttaaagaa
ttTTTAACACTTGGAAGATCATATTTCAATATTTAGAACAGGTCGAACGA
AGGTTGTAAAAGCTTGAATCAACCGATATAAACAGGCTTATTTTAGCTCG
TTGAACAGCCGGAGACCGGAAAGAAAAATTGGCCGGCCAAAGGTCATAAT
TATGGTACAAGACTTTGCTAGCCGTAGCGTGGTGGATCGAACATACAATT
GAGGTAAACTGGAGAGGCAACTTTCCCAAGGTAGCTTTTTGGCGCCCCCT
ATTTAGGAAATCTAGCACGAAACCTTGGAtatcttttccattttttctgg
ctaaaactgttaattttagggtgtgaaaatgaaaaaagcaaagGAGTGTA
GGTTTTTGGCACCCCTTTTAGAAAATCTAGTACGAAACTTTGGATATCTT
GTCCTCGTTCTGGCTGAAAACTGCTAATTCCAGGGTGTAAAAAAACAAAG
GGACGCCTCTTATCCTTCACAGATAGCAAAACCGGCTATCTATGGACCCC
GTGGAGGCAATCGAAAGACTGCCTGAAAGTCCTTGACTATTGGTGGGCAA
TAAAATGTCGACTCTATATTTATAGTACTTCGTCCAAACCTCGTTCATAT
CGTACTGGCACCTTTTAAATGTATACTTGATGGCACCAGATAATTCTTCT
GGGGATAAACGAAAACGAGGCGTTGACTTCACTACTAAAATGTTATGACC
CTGAAATTAATTTCACGTTACAACATACCTCCACCGCAAGTCTTGGAACA
GGATCCCCATTCACCAGCAATCAATTTGAAGGTCGGTAATGGAACAGTGG
TGTCATTGTCAATAGGGGTGTAAAAGGTCCACTCAACCCCTTTGGATGTC
TGAGCGTAATAATTGACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000110-exon-sc0000001-1491911889:2050508..2050632 | TCONS_00000110-exon-sc0000001-1491911889:2050508..2050632 | Clytia hemisphaerica | exon |
| TCONS_00000110-exon-sc0000001-1510915933:2050508..2050632 | TCONS_00000110-exon-sc0000001-1510915933:2050508..2050632 | Clytia hemisphaerica | exon |
| TCONS_00000110-exon-sc0000001-1575043694:2050508..2050632 | TCONS_00000110-exon-sc0000001-1575043694:2050508..2050632 | Clytia hemisphaerica | exon |
| TCONS_00000110-exon-sc0000001-1491911889:2051682..2051826 | TCONS_00000110-exon-sc0000001-1491911889:2051682..2051826 | Clytia hemisphaerica | exon |
| TCONS_00000110-exon-sc0000001-1510915933:2051682..2051826 | TCONS_00000110-exon-sc0000001-1510915933:2051682..2051826 | Clytia hemisphaerica | exon |
| TCONS_00000110-exon-sc0000001-1575043694:2051682..2051826 | TCONS_00000110-exon-sc0000001-1575043694:2051682..2051826 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:2050508..2051826 + |
Blast
The following BLAST results are available for this feature:
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