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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000036 ID=TCONS_00000036|Name=TCONS_00000036|organism=Clytia hemisphaerica|type=transcript|length=506bp
GTCGGAGAGTTTTAGTCAGTGTTTGGAtcatcatgaattttcaatttttg
atgctGCTTGGTATCTTTGGTTTTCAATGTAATGCCGATAACACCTACGG
CCTAAGTTTATTCTTTAAACAGGAAGTAGGCTTCAAGGCTATTCATTGTA
CTATAATACGGATACTTGATAATACGGAAGGGACCACCAGCCAGTATGAG
ATACGACCGGATTACATCGGAgctgaaaaaatcgaaaaaaatatctcaAT
GGAATTCATTTCAACAAATTATTTAAACATGGGACATGATTACACACTAG
ACTGTATGCTCAATGTCAATTGGTGTAGCCTGGATGTCAATGATGGTCAG
GCTAAAGTACGGTCTGGTGATTTCAAATCGACGGAATGGACAAGTGTTTC
TGGAAGGTCGAGAACAGGCAAATGGCTAAATTACAAACTCAAGATTAACA
TGGAAGATATTGCTTAATGGTTCACTTGATTACATCTGTCAAAACTCACA
CAATGA Run BLAST on NCBI transcript from alignment at sc0000001:952435..953993+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000036 ID=TCONS_00000036|Name=TCONS_00000036|organism=Clytia hemisphaerica|type=transcript|length=1559bp|location=Sequence derived from alignment at sc0000001:952435..953993+ (Clytia hemisphaerica)
GTCGGAGAGTTTTAGTCAGTGTTTGGAtcatcatgaattttcaatttttg
atgctGCTTGGTATCTTTGGTTTTCAATGTAAGTTCATTTAACACGCTTT
TTATACAAATAGATACacatttttaatttataagcAGTCGAGTTGCTAAG
GGTCCAGCCCAACCTcgatccctgcgtattatcagctttttgattcttac
tgatagcgctagataataccctggcattggctggttttcgaacgcgaaag
attacgtaattcaaaaacaaaacgtcagatttcattcgcTCTTCTTTTTT
GAGATCGttgcattgcagtgtaactttgtaacgtcagaatatttcatgac
gtattgttttgagaagttccccctctcagagggggaactctcgcatcagc
caacaccagggtattctctggcgtcaatcagtaacgtaaataaagcctgg
gatacacggggacgaggttgggtcCAGCcctgaaaatggccaaaaaatta
agcaaCTTCGCCTTAGCAGCCTAGCCCTGAAACTGAGCATGAACCGGTAA
AGCAACCGAATATACCTTAAAAAGAGACATTTCCGGCATTATTTGGCATT
AAAATGTGTACCGATGGTATTCGAATACTATACTAGAcataaaatgagat
aaaaagccaaaatctttgaagttgCTAGGCATTTTTGACTCAAAATCCAT
AAGCAACTTATTGGCCGAAATCCAGAAAATCCTTAGCAACTCCAGCCCTG
AGTCGAAAATTGGGGTTGCTTCATGGCGTTCTAAAAAAAAGTATATTACA
GTCAACtcactctaattcgaacctctattattcaaatctttctgtaattc
gaactattGGAAGCTGGAATGTGGTTTTAAATTATAttctaaattaaatt
aaaaaagacctttaaagtttgaaccttTCTTTAGTTAAATTTGGATCGGC
cttttaaaaagttataaaagaAAATACGAAAAAGATTGTGTTCCAAAAAA
CCTCACGATTAGGTTGAAAAAATTAATCATTATAAAATATCTTTTCTCCT
CTCTCCATGTTTAGGTAATGCCGATAACACCTACGGCCTAAGTTTATTCT
TTAAACAGGAAGTAGGCTTCAAGGCTATTCATTGTACTATAATACGGATA
CTTGATAATACGGAAGGGACCACCAGCCAGTATGAGATACGACCGGATTA
CATCGGAgctgaaaaaatcgaaaaaaatatctcaATGGAATTCATTTCAA
CAAATTATTTAAACATGGGACATGATTACACACTAGACTGTATGCTCAAT
GTCAATTGGTGTAGCCTGGATGTCAATGATGGTCAGGCTAAAGTACGGTC
TGGTGATTTCAAATCGACGGAATGGACAAGTGTTTCTGGAAGGTCGAGAA
CAGGCAAATGGCTAAATTACAAACTCAAGATNAACTGAATGGACAAGTGT
TTCTGGGAGGTCGAGAACAGGCAAATGGCTAAATTACAAACTCAAGATTA
ACATGGAAGATATTGCTTAATGGTTCACTTGATTACATCTGTCAAAACTC
ACACAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000036-exon-sc0000001-1491911889:952435..952512 | TCONS_00000036-exon-sc0000001-1491911889:952435..952512 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1510915933:952435..952512 | TCONS_00000036-exon-sc0000001-1510915933:952435..952512 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1575043694:952435..952512 | TCONS_00000036-exon-sc0000001-1575043694:952435..952512 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1491911889:953499..953826 | TCONS_00000036-exon-sc0000001-1491911889:953499..953826 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1510915933:953499..953826 | TCONS_00000036-exon-sc0000001-1510915933:953499..953826 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1575043694:953499..953826 | TCONS_00000036-exon-sc0000001-1575043694:953499..953826 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1491911889:953894..953993 | TCONS_00000036-exon-sc0000001-1491911889:953894..953993 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1510915933:953894..953993 | TCONS_00000036-exon-sc0000001-1510915933:953894..953993 | Clytia hemisphaerica | exon |
| TCONS_00000036-exon-sc0000001-1575043694:953894..953993 | TCONS_00000036-exon-sc0000001-1575043694:953894..953993 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:952435..953993 + |
Blast
The following BLAST results are available for this feature:
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