TCONS_00000007 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00000007
Unique Name	TCONS_00000007
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2896

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000001:135795..144660+

transcript sequence

>TCONS_00000007 ID=TCONS_00000007|Name=TCONS_00000007|organism=Clytia hemisphaerica|type=transcript|length=2896bp
TCTTCAACAACCAATAAAACATGTCTCAGAATGGAGTCATCCAACCACTA
CTTACTGACTTTTACCAAATATCCATGGCATATGCATATTGggataataa
aaaaatgaatgacCATGCCGTTTTTGATTTGTTCTTTCGTAAGAACCCTT
TCAAAGGAGAGTTCACAATTTTTGCTGGATTAAGCGAGTGCATTAATTAT
GTGAAGAACTTCAAGTTTAGTGAAGATGatattgAATACTTGGTAAAAGT
GATGCCAGAATCAACTGATCCagaattttttactttcttgaaaaatctaa
cCACAAATGAAGTCACTATTAGTGCGATTCCAGAAGGAACTGTTGTCTTT
GCTAAAGTTCCTCTTATAAGAGTTGAGGGACCTCTAGCAGTTGTCCAGCT
TTTAGAGACAACACTTTTGAATTTGGTCAATTTTGCAAGtcTTGTGGCAA
CTAATGCTGCAAGGTTCAGACACGCTTCAGGAGAAGATAAACTACTGTTA
GAATTTGGTTTACGAAGAGCTCAAGGCCCTGATGGTGGATTATCTGcttc
aaaatattgttatttGGGAGGTTTTGATGGAACAAGTGATGTTTTAGCTG
CCAAGAAATTCAATATTCCAGTAAAAGGGACCCATGCACATGCATTTGTT
TCGTCCTTCCATAAAGCAGATGATGTCAGTCAGTTTCATAAACTGCTGAA
TAAAAACAGCCAGCAAAATGAATCTCTACTTCCTACTGTTGAGAAAAAAC
TACAAGAAGTTGCtgatattttcaagatttctaaGgatCAAGTGAATCAA
GGTGAATTGATGGCATTCACGGCTTACGCAAGTTCATTCCCAAGTTACTT
CCTAGCTTTGATTGATACTTATGATACATTGAAatCTGGTTGTATCAATT
TTTTAGCAGTTGTATTAGCATTAAAAGATTTTGGTTATCAATCTATTGGT
GTACGAATAGATTCTGGTGATTTAGCTTATTTATCAAAGGAATTACGGAA
AATGTTCACAAAGCTTTCAGAAAGGGACACAGTATCAATGCATTTGGAAT
CGGGACACATTTAGTAACATGTCAGAAGCAACCAGCACTAGGATGTGTCT
TCAAGCTTGTTGAGCTAAATGGAGATCCAAGAATGAAGCTAAGTCAAGAC
ATAGCAAAAGTCACAATTCcaggaaagaaaaacatttatcGATTGTATGG
ACATGATGGATTGGCTTTGCTTGACCTTTTAACAAAAGCAGATGAAAAGG
CTCCAGGTATCGAGGAAAGAGTTTTATGCCAGCATCCAATACAAGGTGCT
AAACGAGCATATGTCAAACCAAAAGTTATTGAAAGTCTTCTCAAAGTCTA
CTGGAAGAATGGAAAGATTGAAACACCATTAGATGACTTAGAGGGTTGTC
GCCAAGTTGTGAAAAAATCGTTAGCCACAATCAGACAGGACCACAAGCGT
GCTCTCAACCCGACTCCTTACAAGGTTTCAGTGACCACAGAGTTATTCCA
ATTTATGCATAATTTATGGATGGACTGTGCACCAATCAGCGAATTATCAT
AgattaaaacctttttttaaaggtgTTGAGTACCAGACCATTTCGAACAT
AGTTAGTAATGATACTCTTCCTCTTCTTTACACCTTTATCAGTCATACAA
GTATAATTCGAATTCCCCTTTCTTAAGGGAGAAGGGGCATATTATCGAAG
AAAGGGGAATTCCGGAATTTTCCTCAAAAGGAATGGGATAGCAAGAAGGG
GGTCTACATAATTAgctttcaaatttcttttatattcaCTGTATTAGTCT
AAAAACCATGTTAAAGGTTAAGAACAAAACTATTAAGGGATTTTAGGGTC
CTAGCTAAGATGGGTAAAAAGGGACGTTTTCAAAGCACTTTTCAAGGTTG
GGGATACCAAATGGGTCATTCAGAAGGATTGTCAGACCCCTTCCACCCTA
TTACAAGGATAATGGGTCTGACGGAGAGTCTTCAAAGAGCATTATCCTGA
ACAAAATACAGAATTATTTTCCCTTCACCTTTATATGCTACTAATTCACA
AAGTTCTCCCAACGTTCATATTTCGTTGTATTGTGTTAGCTGTTTAATAA
ATACTTCTTATAAAATTACACAAATACCCCCAGTACAATCGATATCTTGG
TATATTTTAGATAGATTTATATACACATTATCTTTTGTTTTTGGAACACA
GTTTTAAATGTCTTCgaccaaaatttcgaaaaatgtaaaaaattttatCT
ACATAGTTAACTCAAATAAGAGTTCAGGCCAGTAATcttaaaataaatta
taaataaGATTTTAAATCTAGCTTTTTTCCAAATTATCGAAACCAtattg
taaattatttttttaaaggtattttttttacttttttttctgaTTCGTTC
TGTTTTGTAATACTTATTCCCATATAACTTTGAAGAGAGGGAGTCTAGGG
CTTATCCCACATTAAAGGTGAACNTGTAAAAATTTTTATCTACATAGTTA
ACTCAAATAAGAGTTCAGGTCAGTAATcttaaaataaattataaattatt
tttttataggtatttttttttacttttttttctgaTTCGTTCTGTTTTGT
AATACTTATTCCCATATAACTTTGAAGAGAGGGGAGTCTAGGGCTTATCC
CACATTAAAGGTgaacattttgtttttgtatttatatGATACGATTTCTT
TTTACAACACTCGATATCAACTTAATTTCTtgtacatttttaattttagt
tattatatttaattttttgataattatGATTATTGGTTATCAATGTTaaa
gatctttttgaaattatctttAGAATTGttataaaatatagaaaattttG
TCTTTACGGTGTTTCATTTCTTATTTCCAGGGATCTGATTTGTGAA

Run BLAST on NCBI

transcript from alignment at sc0000001:135795..144660+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00000007 ID=TCONS_00000007|Name=TCONS_00000007|organism=Clytia hemisphaerica|type=transcript|length=8866bp|location=Sequence derived from alignment at sc0000001:135795..144660+ (Clytia hemisphaerica)
TCTTCAACAACCAATAAAACATGTCTCAGAATGGAGTCATCCAACCACTA
CTTACTGACTTTTACCAAATATCCATGGCATATGCATATTGggataataa
aaaaatgaatgacCATGCCGTTTTTGATTTGTTCTTTCGTAAGAACCCTT
TCAAAGGAGAGTTCACAATTTTTGCTGGATTAAGCGAGTGCATTAATTAT
GTGAAGAACTTCAAGTTTAGTGAAGATGGTAAgtgatattttcagatttt
tagattttttttttgagatgcTTTGCAAAAAAGCTGAGAATCTTTATTAA
GAACAGGAGCTTTTTGACTTTAAATCTTTTCCAATGTTCTTTTAATTAGG
ATGATGAAAccttttttctcatttcattttttcatttcttccaaTTTTTT
CTTGACCAAATTTTTTGCTTTCCAGCTCTATCATGCAAGGTTGGTTATCA
TTAGTGTtcttacttaattttttttttcagatattgAATACTTGGTAAAA
GTGATGCCAGAATCAACTGATCCagaattttttactttcttgaaaaatct
aacCACAAATGAAGTCACTATTAGTGCGATTCCAGAAGGAACTGTTGTCT
TTGCTAAAGTTCCTCTTATAAGAGTTGAGGGACCTCTAGCAGGTATCATT
CATAATCTTGTTTATTTATCAATTATTTCAGTAATGATTAGGTTTGGTTG
AGCTTAATAATGTATTTAATTAcgttatttatttttgatacaATTAATGT
TCCATAACCATATGTAATTAAACAAGAACTTGATTTTCTAAACTAAGCTA
ATTTTCTTTCAGTTGTCCAGCTTTTAGAGACAACACTTTTGAATTTGGTC
AATTTTGCAAGGTATGTAGGAGTTTACATTTCATTACTAGCTTAAAATAT
GATGGAACTTCATGTCATTTAAAGATATTCATTTATATGAAGTGATTGTT
AGCCATCACACTTGTTAATAACAATATCCAGTCAATAAGTTATCGTACAA
AACTGACaacaaaaaaaatgttccaTCCTTATTAAATCAGCTGGCCTAAT
CTGATATAACCCTAGAAAATCAATATGCTATTTCTTACATGGGGTTATAT
AATATTGTCCTGTttactttctgattttttgtatttttcagtcTTGTGGC
AACTAATGCTGCAAGGTTCAGACACGCTTCAGGAGAAGATAAACTACTGT
TAGAATTTGGTTTACGAAGAGCTCAAGGCCCTGATGGTGGATTATCTGct
tcaaaatattgttatttGGGAGGTAAAGTTATTTATTGCTGATATTCctg
atttcaatagaaattaaTAACACTTTTATAAGATATAAACAGTGTAAGTG
Gcagggggggtcagtactaaaatgtaagacatacatgagtactaaaagga
ttttcgctaatttttgacatacccccacctatttttcgaaaATGTTATTT
TAGTACACATGTACTAAAATTATTTTGAGCAATTTAAtatagataccacc
cattttttgccctgTTACagctttaaatttaccaaaatggggtcattgtt
acaaacctagtcgaatttagtgcatcaatctgcaaaaaaatataatttta
ttactaaactgtgctgaactgtacataaaaatatttttaaaaaatattta
aagaattggaaaaattctgaaagatttctgaagatttttttgaaaattcc
tgaaaaaaaaaatcaaatttttccaaaatttttaaaaaaatgctccattt
tggctgattttagaacaaaatactaagatttttcaaaaatttctttaagg
gaccaccctttttggtattttagtacacatNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCAGTGTAGGTGGAACTTCCAGATTCCAGGATTA
CAGTTTTACCaactttttagcaatttttgccctGTTGACCCAAATcccgc
aacctctttaccttaaggaagtttttcagcgttccgaaaaaaaatgcatg
gccaatttttttctcatcttcacaggatcaatTCTCAACCAAAGAATaca
tcttttgtgaaaaatttatcTGCCTTTTTGCAGAGCAGAGCAAAAGAGCA
AAACTTTTTGCCGTTgaacttttttaaacaaataagCATGGACATTGCCT
TCAGACTGGATTTTGGCTAAGCACTCACTTTTCACCTATATGCTTACTTA
TCGTTAACAGGTTTTGATGGAACAAGTGATGTTTTAGCTGCCAAGAAATT
CAATATTCCAGTAAAAGGGACCCATGCACATGCATTTGTTTCGTCCTTCC
ATAAAGCAGATGATGTCAGTCAGTTTCATAAACTGCTGAATAAAAACAGC
CAGCAAAATGAATCTCTACTTCCTACTGTTGAGAAAAAACTACAAGAAGT
TGCtgatattttcaagatttctaaGGTACTGCCAAGTGCAAAGCAAAATA
CAGGCTGTCtggaaaatgagaaaatgaaaCATGTTTAAAGGGTAACaaac
actacacaatatattgttaggcaatatattgaaaaggtgtcctcaatata
ttgtcagcttgatttgcaattttctcaaaaatatagggggattgtttaca
gaaagaaaattcctttttataatagagcaccTGAAAAcgatattgtcgaa
tattgcttgtcaatatattgtgtagtctaagtagcccttatgTAAAGCTA
TTGTGTGCACTTTGTATCATTGTTTAATATATACACAAGAAAGTTTTCCA
ATATAACCATGTACTGCTAAAAAAGAATAGatgacatttttattttgtag
gatCAAGTGAATCAAGGTGAATTGATGGCATTCACGGCTTACGCAAGTTC
ATTCCCAAGTTACTTCCTAGCTTTGATTGATACTTATGATACATTGAAGT
AAGggattttctatttttgtactttttttttaaattttcaactttttgtt
ttgaaggaCGATTTTAATCACaaagaattgtttttgttttattttttcat
cttttagatCTGGTTGTATCAATTTTTTAGCAGTTGTATTAGCATTAAAA
GATTTTGGTTATCAATCTATTGGTGTACGAATAGATTCTGGTGATTTAGC
TTATTTATCAAAGGAATTACGGAAAATGTTCACAAAGCTTTCAGAAAGGT
AAGTGTAAATAAAATCCAACagctttttcaaaactttccaTCTTCTGGAC
TTAAGAATACTCAAAAAGAATACGCATCCAAAAGGTTAATGTCATTTTAA
CCTTGAAAGATATCATTCTTCTCTATGACTCTGTTGAAAAGTCTTGATGA
TTATATACAAACTTTGTTTGAAAGTAATTCAGAATCTTGATTGGTGCAAC
CACCTAACTCTTCAACAGATCATGTTCTCAGAAGATTTTTTCGATCTGAG
CCAGCAGATTGTTTTCTTTCTAAGCTTACTGTTTCCGTACAAAACATGAA
ATTGTTTCGGATATCTGCTGGCCCAGACAGGGCAAGAGATTGAGGTACCC
AGGTGTTTGTTTCCAACTTAGGTCCTTTGTGACCTAGATTAAAGGATTAC
GATGAAGTGTGTTcacaattgatttttataaatttattcATTTCCTATAA
ATGATTTTTATCATTAGAATAAATTTCCTTTATTAGCTTGAATTTTTGGC
TGGAAAGCAAATTTAGCAATCACAGCAATTAATATTTatcatcaaaatga
aattccTCTATTAGCTTGAACATTGACTGGATAGCAAATTTATCGATCAC
AGCAAGCAATGATATCAATGAGGAGACACTTTACTCTTTGGAACAACAGG
TTTTTTTACTCACCATTTTGAAAGGGAGAATGTTTTATATTATCATTGTT
GTGATAACTTTTACAACCCTTTTTtgccattttgttttcaattaggAAAA
TAACTCATATTTTTTTGACAACTAATCAGCtaatgttgcttgttttttct
gatttttgcagtaagctgcgtattcgcaatgctcaaaacatggctgagtt
tgatttttgagaaaaaagtttttccggttgaagatgccggaaatcgccgt
ttttgcaaattttcattggattttttccttatatttctatgtttttcaca
caaaaacattattgataacaatgctcaccatcaagcatgattcaattgtN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagcatgattcaattg
tcaataaaactgatttttgcgactagaactttctatttattttttcccta
caacccttccctctcccccccatcaacaatcaatgacaaatttattgcat
tatgcatttttgctaaacgctatattttctgactgattgctatctaactt
tcatcatcaggtaggtccattcagcatcgaGTTTATTTAAATGGAAACTC
TTCAAATGAAATTACAATATTTCCTGTTAAATCATAGTCCAGGCACACGG
CAGCGGGGGGCTAGTGTCAGTATATTGtggccctatcactttcaagTGGA
GCCGTGGCCCCTGTTGTCAACTCAAAGTTATCTCTTTTTCAGGGACACAG
TATCAATGCATTTGGAATCGGGACACATTTAGTAACATGTCAGAAGCAAC
CAGCACTAGGATGTGTCTTCAAGGTATAATTACATATTAGCAAGGGATGT
AATTGTCAATGTCTCTGTGTATTAATTGAAATGTAACAGCTTCTTAGAAG
CTTCTTTGAATATAATATATAGCATTGTAGAAAATCTTGACGTAAAAAAT
CTtgtttgccaataaaaaagacTAGCACAGGGATTCCATTTAATCATTGA
TCTATTATACAGGCGGAACATATacatttgtttttattaaattgtctttt
ttttgaCGTAATTCACAATGTCCATATCAGTTTCTTGATGATATCTCGAG
ATTAGGTTATGTTAAATTATTGGCGAAGCACTTTTTGCTGCCTAGAAAAA
CATTAATGTAGCCTTAGCTTAACTCCCCCGAGTCATTTTAAAGAaccttt
tcctgaaaaatttgattgttCTATCTGCTGTTTTGCATTTATTTATAACA
atactttatagttttgaaagtctAGTTGTGGACCAATTTtcttgggacga
gatggagtttttacaagctcttatttgatttggttggtcctTAAccatta
acaaaacaattttgttattttttctaaagaatgcatcatttttattactt
caaattaCCAATTATTAATGTGTCATGTAAAAACTCTATCTCATCTGATA
TTCTTGGTCACATGAAGTAACAGAGTTTTTTTAACCTTCTTGTGTCTCAA
AAATATGATGGATTTTAATGAAtaattaaaaagctttattttttatattt
gttgtCTTTTTGCAGCTTGTTGAGCTAAATGGAGATCCAAGAATGAAGCT
AAGTCAAGACATAGCAAAAGTCACAATTCcaggaaagaaaaacatttatc
GATTGTATGGACATGATGGTAGGATGTTTAAGTTTTTATCCTCTATTCCT
ATAACACCGTGTCTTAAAGTGATTGTGACAGGGTCAACGTTCAGAATCAT
TAGGTTGAATTAGTTTTCCCTCAAAATCCTGTCACTTTGGCTAAGAAGAC
CAATTTAAAAGTCCACAGTGACCTTAGATTTACAGTAGCTTTCTAAAGTA
TTACGAAAGATTATTGGTGGGTTTAAACATGTCACATTCTGTTTTAttat
ccttattttttgttgtagGATTGGCTTTGCTTGACCTTTTAACAAAAGCA
GATGAAAAGGCTCCAGGTATCGAGGAAAGAGTTTTATGCCAGCATCCAAT
ACAAGGTGCTAAACGAGCATATGTCAAACCAAAAGTTATTGAAAGTCTTC
TCAAAGTCTACTGGAAGAATGGAAAGGTACACTCATTTTTCTCACAGGGG
GAATTTTTTGTGTCGTCAAAGGGTCagccactcttttttgcctcaAATTT
TATGATTGTGTTATGATTATgtaatgttttttgaataatagTTTTGAAAT
CTTTAAGGTTTAGAATATCCCAATACTTTATGTATTCCCAAGATTGAGCC
TACTGTATTTTTAGCTCTTTATGCCGGCTAGTTACTTAACTAGTTTCACT
ACCAATTCTTTGGACTTATGAGTGCAACAAATGGAAAGGAAAAGCAATAA
AGACCAAAAGGCAATAgatgaaaagtttttcaataaagGAAAACTCTACt
atacaaaaatacaaaggtggtttcccttgaaaaatacaaaaaataaaaag
tgattttccttgagaaatacaagcaatgaaaaatgatttaGATTGAAAAA
ATGTAATAACTGAAAAGagattttccttgagaaatacaagaaatcgaaaa
ttttgcCAATAAATGAAAAGTGGTTTTCCTAGAGAAATACAGAAATTTTC
AAGTATTTGTGAAATACAAGCAATGAAATGATTTGCCTTGAAAaaatata
ctaaatgaaaagggattttccttgagaaatacaaataatgaaaattgatt
CTAATTGAGAAATAGGGAGAAAAAAACATAATTCATCCAGAAatacaaaa
catgaaaaaaaaaataataaaattatgAATAATGATCGACTTTGTGTATG
ATCATAATTTTATAGATTGAAACACCATTAGATGACTTAGAGGGTTGTCG
CCAAGTTGTGAAAAAATCGTTAGCCACAATCAGACAGGACCACAAGCGTG
CTCTCAACCCGACTCCTTACAAGGTAAGTCTTTTCAGCCTTCTCAAACAT
TTCTTCAATCATAATACATGAAAATGACCAGGTAAAGGATCTGCATATTA
AAGTAAGCAGCAGTAACATGAAGGTGCATTATCCACTTATGTTGTGCAAG
GTTGCATGTttaacccccagccgggtcatccAAAGATTCACAAAATGGTA
CTGGATGCCACTCTGCTTGATGTGGGCATCTGAAGAGACATCACTTGTAA
GtagagaaatccagggaaaggattGGCAACCTCCCCTATCTTCAGGTAGA
CATctagagaaaagggagcctcCGGGTCAACCTCCACTGCGGTCACAAAC
TTATTTATAATAGTTAAAGTTTTGGTATAAGGGTATACATGATTTGGTAC
TTCTAATACTGTAGACAGACATAATATTTTAATCCCTTAGTTAACGTTGA
CCCATCATTAAACCATCATTATTCATCCATCTTCTTACTTATAGGTTTCA
GTGACCACAGAGTTATTCCAATTTATGCATAATTTATGGATGGACTGTGC
ACCAATCAGCGAATTATCATAgattaaaacctttttttaaaggtgTTGAG
TACCAGACCATTTCGAACATAGTTAGTAATGATACTCTTCCTCTTCTTTA
CACCTTTATCAGTCATACAAGTATAATTCGAATTCCCCTTTCTTAAGGGA
GAAGGGGCATATTATCGAAGAAAGGGGAATTCCGGAATTTTCCTCAAAAG
GAATGGGATAGCAAGAAGGGGGTCTACATAATTAgctttcaaatttcttt
tatattcaCTGTATTAGTCTAAAAACCATGTTAAAGGTTAAGAACAAAAC
TATTAAGGGATTTTAGGGTCCTAGCTAAGATGGGTAAAAAGGGACGTTTT
CAAAGCACTTTTCAAGGTTGGGGATACCAAATGGGTCATTCAGAAGGATT
GTCAGACCCCTTCCACCCTATTACAAGGATAATGGGTCTGACGGAGAGTC
TTCAAAGAGCATTATCCTGAACAAAATACAGAATTATTTTCCCTTCACCT
TTATATGCTACTAATTCACAAAGTTCTCCCAACGTTCATATTTCGTTGTA
TTGTGTTAGCTGTTTAATAAATACTTCTTATAAAATTACACAAATACCCC
CAGTACAATCGATATCTTGGTATATTTTAGATAGATTTATATACACATTA
TCTTTTGTTTTTGGAACACAGTTTTAAATGTCTTCgaccaaaatttcgaa
aaatgtaaaaaattttatCTACATAGTTAACTCAAATAAGAGTTCAGGCC
AGTAATcttaaaataaattataaataaGATTTTAAATCTAGCTTTTTTCC
AAATTATCGAAACCAtattgtaaattatttttttaaaggtatttttttta
cttttttttctgaTTCGTTCTGTTTTGTAATACTTATTCCCATATAACTT
TGAAGAGAGGGAGTCTAGGGCTTATCCCACATTAAAGGTGAACNTGTAAA
AATTTTTATCTACATAGTTAACTCAAATAAGAGTTCAGGTCAGTAATctt
aaaataaattataaattatttttttataggtatttttttttacttttttt
tctgaTTCGTTCTGTTTTGTAATACTTATTCCCATATAACTTTGAAGAGA
GGGGAGTCTAGGGCTTATCCCACATTAAAGGTgaacattttgtttttgta
tttatatGATACGATTTCTTTTTACAACACTCGATATCAACTTAATTTCT
tgtacatttttaattttagttattatatttaattttttgataattatGAT
TATTGGTTATCAATGTTaaagatctttttgaaattatctttAGAATTGtt
ataaaatatagaaaattttGTCTTTACGGTGTTTCATTTCTTATTTCCAG
GGATCTGATTTGTGAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000005	XLOC_000005	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000001	supercontig	sc0000001:135795..144660 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.211989	0	0	0.205252	0	0	0.804945	0.156929	0	0	0	0.274799	0	0.218429	0	0	1.5756	0	0	0	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00000007 vs. Swiss-Prot (Human)
Match: PNCB (Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT PE=1 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 5.857e-119
Identity = 156/322 (48.45%), Postives = 212/322 (65.84%), Query Frame = 3

Query:   42 QPLLTDFYQISMAYAYWDNKKMNDHAVFDLFFRKNPFKGEFTIFAGLSECINYVKNFKFSEDDIEYLVKVMPESTDPEFFTFLKNLTTNEVTISAIPEGTVVFAKVPLIRVEGPLAVVQLLETTLLNLVNFASLVATNAARFRHASGEDKLLLEFGLRRAQGPDGGLSASKYCYLGGFDGTSDVLAAKKFNIPVKGTHAHAFVSSFHKADDVSQFHKLLNKNSQQNESLLPTVEKKLQEVADIFKISKDQVNQGELMAFTAYASSFPSYFLALIDTYDTLKSGCINFLAVVLALKDFGYQSIGVRIDSGDLAYLSKELRKMF 1007
            +PLLTD YQ +MA  YW   +  D A F+LFFR+ PF G F + AGL +C+ +++ F+  + D+++L  V+P  TDP FF  L+ L  +EVT+ A+PEG++ F  VPL++V GPL VVQLLET LL LV++ASLVATNAAR R  +G +K LLE GLRRAQGPDGGL+AS Y YLGGFD +S+VLA +   +PV GT AH+FV+SF  ++                  L    +  L++V     +   + + GE  AF AYA +FP  F  L+DTY   +SG  NFLAV LAL + GY+++GVR+DSGDL   ++E+RK+F
Sbjct:   14 RPLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGTLAHSFVTSFSGSEVPPDPMLAPAAGEGPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVF 335

HSP 2 Score: 121.709 bits (304), Expect = 5.857e-119
Identity = 66/181 (36.46%), Postives = 105/181 (58.01%), Query Frame = 2

Query:  998 ENVHKAFRKGHSINAFGIGTHLVTCQKQPALGCVFKLVELNGDPRMKLSQDIAKVTIPGKKNIYRLYGHDGLALLDLLTKADEKAP--GIEERVLCQHPIQGAKRAYVKPKVIESLLKVYWKNGKIETPLDDLEGCRQVVKKSLATIRQDHKRALNPTPYKVSVTTELFQFMHNLWMDCAP 1534
            E + +  ++G  +N  GIGT +VTC +QP+LG V+KLV + G PRMKL++D  K T+PG K  +RL G DG  L+D+L  A+E  P  G E RV    P    +   V+P  +E LL++  + G++  PL  L   R + + SL+ +  +H+R  +P  Y+V ++  L   +++L    +P
Sbjct:  361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRV---WPPGAQEPCTVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538

The following BLAST results are available for this feature:

BLAST of TCONS_00000007 vs. Swiss-Prot (Human)

BLAST of TCONS_00000007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
PNCB	5.857e-119	48.45	Nicotinate phosphoribosyltransferase OS=Homo sapie...	[more]

You are here

TCONS_00000007 (transcript) - C. hemisphaerica

ZOOM

x 1

POSITION

0