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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073795-protein ID=TCONS_00073795-protein|Name=TCONS_00073795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MAAAQAGGYEFKVKGKLPTTCQCLICQELIRECTELPCHHPYCKSCLLRW
EDQKGEENERLGRNHVLRCLLCNQEYKVQDKHYSGAIDRIVTEDLEVLCK
HHEQGCPWTGAINDFMQHATTDCPYVEITCRFTGCDAHVLRIAKQRHEQN
CPMKEINCDYCHQVIKVSRAQEHYGECGFHPTICGNTGCQHVCPKNQIAH
HQSTDCLYQKISCSFNDVGCKVKVLRKDLLDHEAAANVSHTKLLLQKYLQ
ANTELAKTKQDLVETKKTLKVTSDELYATKEQLNITNNELLDAKTKLQNV
ETKLREFNNEIEERKRNYLSPKKTQKAAKTLPSQQHKPIISSYPEPSAKL
TFQKDDQEINSLFSSSQSIPNYARRFENLSSKMETG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 280..317 |
| None | No IPR available | GENE3D | 1.10.287.620 | | coord: 227..335
e-value: 9.1E-4
score: 18.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 321..342 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 22..79 |
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 23..72
e-value: 4.5E-4
score: 29.5 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 23..73
score: 9.848 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 22..50
e-value: 0.00451647
score: 33.5732 |
| IPR001293 | Zinc finger, TRAF-type | PFAM | PF02176 | zf-TRAF | coord: 173..232
e-value: 1.1E-8
score: 35.5
coord: 114..147
e-value: 1.0E-4
score: 22.8 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 118..161
score: 9.312 |
| IPR001293 | Zinc finger, TRAF-type | PROSITE | PS50145 | ZF_TRAF | coord: 173..224
score: 10.743 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 192..226
e-value: 2.5E-9
score: 36.7
coord: 165..191
e-value: 7.0E-4
score: 19.2
coord: 92..139
e-value: 4.3E-12
score: 45.6
coord: 140..164
e-value: 0.0016
score: 18.1 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 4..91
e-value: 1.2E-9
score: 37.1 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 38..47 |
| IPR008974 | TRAF-like | SUPERFAMILY | 49599 | TRAF domain-like | coord: 95..156 |
| IPR008974 | TRAF-like | SUPERFAMILY | 49599 | TRAF domain-like | coord: 187..235 |
Blast
The following BLAST results are available for this feature:
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