TCONS_00073747-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073747-protein
Unique NameTCONS_00073747-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length379

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073747-protein ID=TCONS_00073747-protein|Name=TCONS_00073747-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MSSNIVTDSSKNSAEATALIKEIIAANYKSQKTSVAYPSFAQSGLEAAVV
AGEKRSFDTVTIPSHLQDHQIALATPPKQARSDEIVVSLSNVHSLNEQGS
SNTTIQVVDVDTTDNNIVIDPSKQITQIHNSNEIGSTAAINIVEEGSDMT
GDKITTVNMTMPSVDIPNNVSTAAANQQSSQQSNFVITEIKPPENQQIVL
TEEELAEMPVKDLNALLRGLPDAEVIKLKQRRRTIKNRGYAQTSRTKRTT
QKSTLEDEKSILESELQKLADENDLLRKERDEAKIKLEAFERFAGMSGIV
IVTNDNAASMQANTTTNVVTQMKQENKQTIINNPTQPIDISSTNIVNLLD
RNRSQKFNVAGIINTGMAPGLAPSLVKKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045793XLOC_045793Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073747TCONS_00073747Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR004826bZIP_Maf
IPR008917TF_DNA-bd
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..286
NoneNo IPR availableGENE3D1.20.5.170coord: 244..290
e-value: 4.6E-7
score: 29.6
NoneNo IPR availableGENE3D1.10.880.10coord: 25..243
e-value: 2.0E-20
score: 72.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..256
NoneNo IPR availableCDDcd14717bZIP_Maf_smallcoord: 224..291
e-value: 1.04204E-26
score: 100.131
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 225..289
e-value: 3.5E-5
score: 33.2
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 227..290
score: 9.404
IPR004826Basic leucine zipper domain, Maf-typePFAMPF03131bZIP_Mafcoord: 200..288
e-value: 1.5E-24
score: 86.2
IPR008917Transcription factor, Skn-1-like, DNA-binding domainSUPERFAMILY47454A DNA-binding domain in eukaryotic transcription factorscoord: 194..251

Blast
[Close]
BLAST of TCONS_00073747-protein vs. Swiss-Prot (Human)
Match: MAFG (Transcription factor MafG OS=Homo sapiens GN=MAFG PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 5.763e-25
Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 0 
Query:  200 LTEEELAEMPVKDLNALLRGLPDAEVIKLKQRRRTIKNRGYAQTSRTKRTTQKSTLEDEKSILESELQKLADENDLLRKERDEAKIKLEAFERFA 294
            LT+EEL  M V++LN  LRGL   E+++LKQRRRT+KNRGYA + R KR TQK  LE +K+ L+ E++KLA EN  ++ E D  + K EA + FA
Sbjct:   24 LTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFA 118
The following BLAST results are available for this feature:
BLAST of TCONS_00073747-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAFG5.763e-2552.63Transcription factor MafG OS=Homo sapiens GN=MAFG ... [more]
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