TCONS_00073728-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073728-protein
Unique NameTCONS_00073728-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073728-protein ID=TCONS_00073728-protein|Name=TCONS_00073728-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MSLFKDVLSKRSRKKSKSLHLTGEMIARKLQSNLHRNSFSGVGDDERRTA
SKNMPGTRKLSRSSSYADCEAVLLNAVAHEDVGTVKRILESDKVDLNVIR
NGLAPLHHACLNGNMTIIRLLIKNNADVNLQTKDGKTPIKLAVMNGHFEL
AELLISHGSKDTDIIDGVME
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045779XLOC_045779Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073728TCONS_00073728Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
MSLFKDVLSKRSRKKSKSLHLTGEMIARKLQSNLHRNSFSGVGDDERRTASKNMPGTRKLSRSSSYADCEAVLLNAVAHEDVGTVKRILESDKVDLNVIRNGLAPLHHACLNGNMTIIRLLIKNNADVNLQTKDGKTPIKLAVMNGHFELAELLISHGSKDTDIIDGVME20406080100120140160Score = 10.659Score = 13.651Expect = 8.3E-26 / Score = 89.9Expect = 3.0E-15 / Score = 56.5Score = 22.782Score = Score = Expect = 6.82441E-20 / Score = 80.1202SequenceSM00248PS50088PS50088G3DSA:1.25.40.20PF12796PS50297SSF48403mobidb-litecd00204
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 68..98
e-value: 1700.0
score: 3.3
coord: 134..164
e-value: 1.7E-4
score: 30.9
coord: 101..130
e-value: 1.2E-5
score: 34.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 134..159
score: 10.659
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 101..133
score: 13.651
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 9..166
e-value: 8.3E-26
score: 89.9
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 75..159
e-value: 3.0E-15
score: 56.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 101..159
score: 22.782
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 69..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..62
NoneNo IPR availableCDDcd00204ANKcoord: 73..166
e-value: 6.82441E-20
score: 80.1202

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073728-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
MSLFKDVLSKRSRKKSKSLHLTGEMIARKLQSNLHRNSFSGVGDDERRTASKNMPGTRKLSRSSSYADCEAVLLNAVAHEDVGTVKRILESDKVDLNVIRNGLAPLHHACLNGNMTIIRLLIKNNADVNLQTKDGKTPIKLAVMNGHFELAELLISHGSKDTDIIDGVME20406080100120140160Sequence
Match NameE-valueIdentityDescription
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