TCONS_00073696-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073696-protein
Unique NameTCONS_00073696-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length939

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073696-protein ID=TCONS_00073696-protein|Name=TCONS_00073696-protein|organism=Clytia hemisphaerica|type=polypeptide|length=939bp
MTISRIKTGILSLTNGELLHGLPFEIWRIVLAFLCAKDLCCCSQVCKDWR
ALVDSLDTTRWKQIYLLQERTKRWKHPNWPNESSSSPALKSTWKDLYRKR
FQLSRLWLRNQVAASCVVPFLFPRRKSPRTFHVGLGKQYQTIKAALDKAS
PYAKIIVHPGTYQDSSILYLKYPIAILGIDDASNITLMMQIEIRCDSVKM
ENLTIKPLYVRARGRGSSTAIIRALTGHLCLFNCIVTQGCISVVSPGSVT
VLNCTFTSAFIKFVGVGYSSITGTDFIPNRIAICIEEPLFQYPVRPTLTS
EDVGGWIFAANDKAFDEYYKGCIKGGCSKRNIQPEIKAAPAPPILSDTEY
SDSESDMVGRVGGTSNNTASTKASSKDTKSQPKDNSILDSNTRGILKTAQ
GVIINNIRVSNGWGGITVYRMGQAWIENSTFHNLVYGIRCLQSSKCIILN
NKIHDCETMGVFFRDHSTGLVAGNQIFSNGEAGIDIRSNANPIIQHNEIY
GGQRSGVVCLENGKGMIRENDIYNNKEAAIYILHHGNPKIKNNFICSGKA
SGIAVTENGRGHITQNVITGMEWAGIDVRHGGNPVISHNIIKNGQSDGIV
IGDQGKSVIFDNTIEGNSGCGIWILDGSHPLVHSNRIIYSGSNGIAFVSK
SDQEHDRKFESHLIQNDPSSRQHDANDGHGNGGGGAGGGGGGVDGFIFEE
DGFPIAPINFALPEIEPESRYIHVSKPDKTVAQIESNHVENNRGCGILYD
GKEGIVISKNRISGNSKHGIALLRSNEITIDRNTIRNNLLSGINVEVGVC
CSIHKNGIYDNKEHGIHSGGLGLIKLNDILSHASPSLFIRTYGNLTVTQN
RLHSWKHECVFVEEKCRVILEENEFFITLEPPASELCVLEKSDITYVENR
ELVHRLGPIRYRDGLKVEDLIEIFENFVSTNDNFGVKRE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045759XLOC_045759Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073696TCONS_00073696Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR006633Carb-bd_sugar_hydrolysis-dom
IPR006626PbH1
IPR022441Para_beta_helix_rpt-2
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 22..63
e-value: 7.8E-6
score: 35.4
IPR001810F-box domainPFAMPF00646F-boxcoord: 21..62
e-value: 2.6E-9
score: 36.6
IPR001810F-box domainPROSITEPS50181FBOXcoord: 16..64
score: 11.961
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 15..103
IPR006633Carbohydrate-binding/sugar hydrolysis domainSMARTSM00722completecoord: 692..819
e-value: 39.0
score: 6.7
coord: 363..510
e-value: 0.72
score: 18.9
coord: 518..648
e-value: 0.003
score: 26.8
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 489..511
e-value: 480.0
score: 9.5
coord: 604..626
e-value: 210.0
score: 10.7
coord: 421..442
e-value: 1000.0
score: 7.1
coord: 798..820
e-value: 4200.0
score: 2.8
coord: 581..603
e-value: 3.1
score: 16.8
coord: 512..534
e-value: 500.0
score: 9.4
coord: 399..420
e-value: 31.0
score: 13.5
coord: 443..465
e-value: 1500.0
score: 6.0
coord: 627..649
e-value: 210.0
score: 10.7
coord: 466..488
e-value: 74.0
score: 12.2
coord: 729..751
e-value: 1100.0
score: 7.0
coord: 535..557
e-value: 2700.0
score: 4.1
coord: 752..774
e-value: 15.0
score: 14.5
coord: 558..580
e-value: 530.0
score: 9.2
coord: 775..797
e-value: 5.4
score: 16.0
coord: 842..864
e-value: 5700.0
score: 1.8
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 461..501
e-value: 9.4E-5
score: 20.0
coord: 748..788
e-value: 2.2E-6
score: 25.2
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 553..695
e-value: 1.7E-14
score: 53.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 126..340
e-value: 3.2E-14
score: 52.5
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 721..900
e-value: 4.2E-13
score: 48.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 362..552
e-value: 2.6E-25
score: 88.6
NoneNo IPR availablePFAMPF13229Beta_helixcoord: 551..652
e-value: 1.3E-12
score: 47.8
coord: 731..875
e-value: 8.3E-16
score: 58.1
coord: 398..545
e-value: 2.5E-22
score: 79.3
NoneNo IPR availableGENE3D1.20.1280.50coord: 17..120
e-value: 2.5E-15
score: 56.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 656..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..389
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 129..287
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 733..868
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 505..648
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 385..545

Blast
[Close]
BLAST of TCONS_00073696-protein vs. Swiss-Prot (Human)
Match: FBX10 (F-box only protein 10 OS=Homo sapiens GN=FBXO10 PE=1 SV=3)

HSP 1 Score: 316.235 bits (809), Expect = 3.352e-93
Identity = 186/490 (37.96%), Postives = 269/490 (54.90%), Query Frame = 0 
Query:  389 DSNTRGILKTAQGVIINNIRVSNGWGGITVYRMGQAWIENSTFHNLVYGIRCLQSSKCIILNNKIHDCETMGVFFRDHSTGLVAGNQIFSNGEAGIDIRSNANPIIQHNEIYGGQRSGVVCLENGKGMIRENDIYNNKEAAIYILHHGNPKIKNNFICSGKASGIAVTENGRGHITQNVITGMEWAGIDVRHGGNPVISHNIIKNGQSDGIVIGDQGKSVIFDNTIEGNSGCGIWILDGSHPLVHSNRIIYSGSNGIAFVSKSDQEHDRKFESHLIQNDPSSRQHDANDGHGNGGGGAGGGGGGVDGFIFEEDGFPIAPINFALPEIEPESRYIHVSKPDKTVAQIESNHVENNRGCGILYDGKEGIVISKNRISGNSKHGIALLRSNEIT-IDRNTIRNNLLSGINVEVGVCCSIHKNGIYDNKEHGIHSGGLGLIKL-NDILSHASPSLFIRTYGNLTVTQNRLHSWKHECVFVEEKCRVILEENEFF 876
            D     +  + QG +I      +G GG+ V   G+A +E + F NL Y +RC+ +SK I+L N I+ C   G+F R    GL+AGN I+ N EAG+DIR  +NP+I  N+I+ G RSG+V L NGKG+IR N I++NKEA IYIL+HGNP +  N I  G+A+GIAV ENG+G IT+NVI   +W G+D+R GG PV+  N+I  G SDG+V+GD+GK +I  NTI  N GCG+W++  S P V SN + Y+G  G+A  S+ D   +              R H A +                    F EDG  I      L E E E     + +P  T+A +ESN + +N   G+     E + +  N I  N   GI + +S++ T +  N+I  N  SG+ VE      +  NGIYDN+ HGI + G   I + NDI+ +    L +    +  V +NR+HS++   + V  + + +++EN  F
Sbjct:  417 DKEAMALANSVQGCLIRKCLFRDGKGGVFVCSHGRAKMEGNIFRNLTYAVRCIHNSKIIMLRNDIYRCRASGIFLRLEGGGLIAGNNIYHNAEAGVDIRKKSNPLILCNQIHHGLRSGIVVLGNGKGIIRNNQIFSNKEAGIYILYHGNPVVSGNHIFKGRAAGIAVNENGKGLITENVIRENQWGGVDIRRGGIPVLRSNLICFGYSDGVVVGDEGKGLIEGNTIYANKGCGVWMMSSSLPHVTSNHVSYNGLYGVAVFSQKDGSSELP------------RGHRAQEN-------------------FSEDGDAI------LWETELEKEDDPLRRP-ITIALVESNSINHNGASGLYVQSSEALHVITNVIHANGDRGITVAQSSQPTRVANNSISCNRQSGVKVEAQCKVELRGNGIYDNRGHGIITKGDSTIVIENDIIGNRGSGLQLLPRSDTKVIKNRIHSFRAYGIAVRGRAKALVQENIIF 868

HSP 2 Score: 156.762 bits (395), Expect = 4.956e-39
Identity = 83/258 (32.17%), Postives = 136/258 (52.71%), Query Frame = 0 
Query:   21 GLPFEIWRIVLAFLCAKDLCCCSQVCKDWRALVDSLDTTRWKQIYLLQERTKRWKHPNWPNESSSSPALKSTWKDLYRKRFQLSRLWLRNQVAASCVVPF-LFPRRKSPRTFHVGLGKQYQTIKAALDKASPYAKIIVHPGTYQDSSILYLKYPIAILGIDDASNITLMMQIEIRCDSVKMENLTIKPLYVRARGRGSSTAIIRALTGHLCLFNCIVTQGCISVVSPGSVTVLNCTFTSAFIKFVGVGYSSITGTDFI 277
            GLP E+WR++LA+L   DL  CS VC+ W  L+ SLD+TRW+Q+ L        +HPNWPN+    P    +W++ +++ +  S+ W +N +     + F LF RR+  RT  VG G+++ ++ +AL  AS Y +I++ PG Y++   + LK P+ I+G      + L+  I+  C + ++ NL   P +        S  + +  +GH+   NC    G I V  PG+  V  CTF +  I    V    +   +F+
Sbjct:    5 GLPLELWRMILAYLHLPDLGRCSLVCRAWYELILSLDSTRWRQLCL---GCTECRHPNWPNQPDVEP---ESWREAFKQHYLASKTWTKNALDLESSICFSLFRRRRERRTLSVGPGREFDSLGSALAMASLYDRIVLFPGVYEEQGEIILKVPVEIVGQGKLGEVALLASIDQHCSTTRLCNLVFTPAWF-------SPIMYKTTSGHVQFDNCNFENGHIQVHGPGTCQVKFCTFKNTHIFLHNVPLCVLENCEFV 249
The following BLAST results are available for this feature:
BLAST of TCONS_00073696-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBX103.352e-9337.96F-box only protein 10 OS=Homo sapiens GN=FBXO10 PE... [more]
back to top