TCONS_00073686-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073686-protein
Unique Name	TCONS_00073686-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	493

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073686-protein ID=TCONS_00073686-protein|Name=TCONS_00073686-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
AKYNIMLEEDASNSESSGQHSLSKVEESIGEFSPLLASKPQDSVGQSAIQ
DEIKPPKMFKSKREVVILIALSLMVFAATCCESILAPFFSPEAKSKGAGG
TTIGAIFAIYPFSIFLLSPFVGKYLPIIGCRFCLLAGAFIMGGAQLLFGF
VSTIESGSLFIVYCFAIRTVTAIGASMTSTAGLSILTISFKEHLAIIFSI
NELFIGVGYTSGPAIGGILYRVGGFHLPFTITGSILLAMIIPVFFLLPPE
ESFHNTSKNGNVRAKEDEEIGSLIQTLKVPGIFVISICIVSCGTILAFFD
PTLTPYLLKIDPGITSEQIGLVFFMTSFLYVVGTPIVGAICDKKISGRHL
MIIGHFTTALSYFLLGPSPLFQNFLKGSVLLVEISMCFIGFCAAFFCVPL
LSDMQKSGKKSGLPQTIATDTLISGIFNGCFGIGCSIGPLLGSTLVDLWG
FEWTATIMALIITVEGLVLFFFTIWEKKYYSKMQGYTKIAEEA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045755	XLOC_045755	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073686	TCONS_00073686	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 54..260 e-value: 1.2E-23 score: 83.0 coord: 267..491 e-value: 5.7E-25 score: 87.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 72..410 e-value: 1.3E-28 score: 99.9
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 67..478 score: 16.163
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 68..472 e-value: 1.4225E-26 score: 108.17
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 66..478

Blast

[Close]

BLAST of TCONS_00073686-protein vs. Swiss-Prot (Human)
Match: S18B1 (MFS-type transporter SLC18B1 OS=Homo sapiens GN=SLC18B1 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 8.547e-61
Identity = 137/435 (31.49%), Postives = 220/435 (50.57%), Query Frame = 0

Query:   61 SKREVVILIALSLMVFAATCCESILAPFFSPEAKSKGAGGTTIGAIFAIYPFSIFLLSPFVGKYLPIIGCRFCLLAGAFIMGGAQLLFGFVSTIESGSLFIVYCFAIRTVTAIGASMTSTAGLSILTISFKEHLAIIFSINELFIGVGYTSGPAIGGILYRVGGFHLPFTITGSILLAMIIPVFFLLPPEESFHNTSKNGNVRAKEDEEIGSLIQTLKVPGIFVISICIVSCGTILAFFDPTLTPYLLKIDPGITSEQIGLVFFMTSFLYVVGTPIVGAICDKKISGRH-LMIIGHFTTALSYFLLGPSPLFQNFLKGSVLLVEISMCFIGFCAAFFCVPLLSDMQKSGKKSGLPQTIATDTLISGIFNGCFGIGCSIGPLLGSTLVDLWGFEWTATIMALIITVEGLV--LFFFTIWEKKYYSKMQGYTKIAEE 492
            S+ +V +LI+ + +   +  C SIL PFF  EA+ KGA  T IG IF  +     L S   G YL  IG +F  +AG F+ GG  +LFG +  +  G +FI  CF +R + A+  +   TA  SIL  +F  ++A +    E F G+G   GP +GG LY+  G+ +PF + G ++L M+    ++LP  ES              D    S  + + +P + +I+  I S  +   F DPTL+ ++L+    + +  +GLVF   +  Y + +P+ G + DK+   R  L++ G+  TA  Y LLGP P+    +K  + L+ + +   G  A    +P   ++     ++G  + ++T  L+SG+F+  + IG  +GP LG  L +  GFEW A I  L   + GL   LF+   + ++  SK Q      EE
Sbjct:   30 SREQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASLVFGNYLVHIGAKFMFVAGMFVSGGVTILFGVLDRVPDGPVFIAMCFLVRVMDAVSFAAAMTASSSILAKAFPNNVATVLGSLETFSGLGLILGPPVGGFLYQSFGYEVPFIVLGCVVLLMVPLNMYILPNYES--------------DPGEHSFWKLIALPKVGLIAFVINSLSSCFGFLDPTLSLFVLE-KFNLPAGYVGLVFLGMALSYAISSPLFGLLSDKRPPLRKWLLVFGNLITAGCYMLLGPVPILH--IKSQLWLLVLILVVSGLSAGMSIIPTFPEILSCAHENGFEEGLSTLGLVSGLFSAMWSIGAFMGPTLGGFLYEKIGFEWAAAIQGLWALISGLAMGLFYLLEYSRRKRSKSQNILSTEEE 447

The following BLAST results are available for this feature:

BLAST of TCONS_00073686-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073686-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S18B1	8.547e-61	31.49	MFS-type transporter SLC18B1 OS=Homo sapiens GN=SL...	[more]

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TCONS_00073686-protein (polypeptide) - C. hemisphaerica