TCONS_00073681-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073681-protein
Unique Name	TCONS_00073681-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	514

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073681-protein ID=TCONS_00073681-protein|Name=TCONS_00073681-protein|organism=Clytia hemisphaerica|type=polypeptide|length=514bp
EMPIENSSTQSTPCTPRRSVISSPAFNKRAGRNSVSGLTGNLSAPGTPVT
MHVRLSSNTSSSSDHSKFYYSENKITPIPENESTIGDQRPIHIDRVPAST
ALGLGIIGGNHIGIFISDIQKGSLASQSNLRCGDQILKYNDKDMGNITLE
EAILELGKHTEVSDLQVQYNPPGYRKAQTQANDSFYVRAQFDRFPHGKGE
LSFRKGDILHVTETFYKGQLGVWRASIVNDNETTKPSSGKLTKGKIPSKR
KAEQELLLRRSSSYGDDKSKNRKSLFRRSKKGSSHHAINHSRESSDSKAE
IESTVSGGTSFVFISDDFNTYQFVKQLECKFPRPVIIVGPMAEPICDKLV
IHWSMNFARCFEVVHSTQDEMSENVDSGTYLDYKLRKGGDRYEVVTANAV
KEFSQKQTKHCLLDINMDAIERIINAHLYPIIIYLKFKSGKIIKDMRDGH
FIKDKLSTKEAKDLYDTYLKQEKDSKHFFNVTINAVSNLHQVCKDINDAV
LEQQKKALWVNNDE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045752	XLOC_045752	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073681	TCONS_00073681	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008145	GK/Ca_channel_bsu
IPR001478	PDZ
IPR001452	SH3_domain
IPR008144	Guanylate_kin-like_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008145	Guanylate kinase/L-type calcium channel beta subunit	SMART	SM00072	gk_7	coord: 331..504 e-value: 2.5E-4 score: 7.5
IPR008145	Guanylate kinase/L-type calcium channel beta subunit	PFAM	PF00625	Guanylate_kin	coord: 367..500 e-value: 5.1E-8 score: 32.7
IPR001478	PDZ domain	SMART	SM00228	pdz_new	coord: 100..171 e-value: 5.2E-11 score: 52.6
IPR001478	PDZ domain	PFAM	PF00595	PDZ	coord: 101..162 e-value: 5.0E-8 score: 33.1
IPR001478	PDZ domain	PROSITE	PS50106	PDZ	coord: 90..171 score: 14.978
IPR001478	PDZ domain	SUPERFAMILY	50156	PDZ domain-like	coord: 86..176
None	No IPR available	GENE3D	2.30.30.40		coord: 187..259 e-value: 1.2E-11 score: 43.8
None	No IPR available	GENE3D	2.30.42.10		coord: 87..186 e-value: 1.4E-13 score: 50.3
None	No IPR available	GENE3D	3.40.50.300		coord: 316..513 e-value: 2.7E-25 score: 88.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..300
None	No IPR available	CDD	cd00992	PDZ_signaling	coord: 117..153 e-value: 6.4489E-7 score: 46.0207
IPR001452	SH3 domain	PROSITE	PS50002	SH3	coord: 182..256 score: 8.602
IPR001452	SH3 domain	SUPERFAMILY	50044	SH3-domain	coord: 185..258
IPR008144	Guanylate kinase-like domain	PROSITE	PS50052	GUANYLATE_KINASE_2	coord: 361..501 score: 13.397
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 333..510

Blast

[Close]

BLAST of TCONS_00073681-protein vs. Swiss-Prot (Human)
Match: DLG5 (Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1 SV=4)

HSP 1 Score: 233.802 bits (595), Expect = 1.179e-66
Identity = 145/421 (34.44%), Postives = 229/421 (54.39%), Query Frame = 0

Query:  102 LGLGIIGGNHIGIFISDIQKGSLASQSN-LRCGDQILKYNDKDMGNITLEEAILELGKHTEVSDLQVQYNPPGYRKAQTQANDSFYVRAQFDRFPHGKGELSFRKGDILHVTETFYKGQLGVWRASIVNDNETTKPSSGKLTKGKIPSKRKAEQELLLRRS-SSYGDDKSKN-------RKSLFRRSKKGSSHHAINHSRESS-DSKAEIESTVSGGTSFVFISDDFN-TYQFVKQLECKFPRPVIIVGPMAEPICDKLVIHWSMNFARC-FEVVHSTQDEMSENVDSGTYLDYKLRKGGDRYEVVTANAVKEFSQKQTKHCLLDINMDAIERIINAHLYPIIIYLKFKSGKIIKDMRDGHFIKDKLSTKEAKDLYDTYLKQEKDSKHFFNVTINAVSNLHQVCKDINDAVLEQQKKALWV 510
            LG+ + GGN  G+F+++++  S A   + L  GD IL+Y   D+ N T+EE  +E+ K  +   L+VQY P  + KA+    DSFY+RA +DR    + ELSF+K DIL+V +T  +G  G W A  +++N      + K+ +G+IPSK   +QE   R S S   DD S         R+S FRR  K        H R  S D K  +        S     D  +  YQ V++++C   RPV+I+GP+ + + + LV      F RC  EV+ ++Q  +   V    ++DYK R G   ++V T  ++KE ++K  +HCLLDI   AIER+ + H+YPI+I++ +KS K IK+ RD  +++DK++ + +K+ ++   K E++   +F   I     L  +C  I   V ++Q K LW+
Sbjct: 1512 LGVHLCGGNLHGVFVAEVEDDSPAKGPDGLVPGDLILEYGSLDVRNKTVEEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDILYVDDTLPQGTFGSWMAWQLDEN------AQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTLSAAARRSFFRRKHK--------HKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALRPVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSG--HFDVTTVASIKEITEK-NRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDKVTQRHSKEQFEAAQKLEQEYSRYFTGVIQG-GALSSICTQILAMVNQEQNKVLWI 1914

The following BLAST results are available for this feature:

BLAST of TCONS_00073681-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073681-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DLG5	1.179e-66	34.44	Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1...	[more]

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TCONS_00073681-protein (polypeptide) - C. hemisphaerica