TCONS_00073664-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073664-protein
Unique NameTCONS_00073664-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073664-protein ID=TCONS_00073664-protein|Name=TCONS_00073664-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
MLEFLMIQHEILIIKKVYLTPFLSKGKMDTVKAIKIEDNSVGYEENGSFA
GKDITPGIKIESKEENLELTLQQENLNELDLMKVEFDYGFLRNENLEPSK
TEDPRKNKTLNELDSMKVEFDYGFLRNKENFLLDSKSLDTKIEYKMYQNP
EIKPCVVLITKCKIPLTATTKSKFKEGKICKGIFKIRKGIKKFKCEKCDS
SFGSNSHLKRHLKSVVHTTVKAFDCSECEKTFKSKDALQRHIKISHRSIK
QDSKELKCLKILATNASLSWR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045741XLOC_045741Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073664TCONS_00073664Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 223..246
e-value: 7.8E-5
score: 32.1
coord: 193..217
e-value: 0.0053
score: 26.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 225..246
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 195..217
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 193..222
score: 12.715
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 223..251
score: 12.528
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 191..243
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 193..217
e-value: 5.3E-4
score: 20.2
coord: 223..246
e-value: 1.2E-5
score: 25.4
NoneNo IPR availableGENE3D3.30.160.60coord: 232..259
e-value: 5.9E-5
score: 22.5
NoneNo IPR availableGENE3D3.30.160.60coord: 206..231
e-value: 5.6E-15
score: 54.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 91..205
e-value: 1.3E-5
score: 24.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073664-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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