TCONS_00073659-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073659-protein
Unique Name	TCONS_00073659-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	929

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073659-protein ID=TCONS_00073659-protein|Name=TCONS_00073659-protein|organism=Clytia hemisphaerica|type=polypeptide|length=929bp
MTSKKEVQDPWEILEVPAVINFSSKSNEDEGEENDFSQNNSKTKKDNKER
LCGYLNKMGAGIIKGWKKRWFVYDPRRCLLFYYRRPQDTEPLGTIDIASA
TFSYNPNVKALFSISSGDRLYQLEAPDNNAMMFWLQELQAKRREFSKLVE
ANAGNNRPTSGLLSDPIDAPQGGDDEADGFNKIIERPHNVGEKTALDSKG
NFSFTHLNKEFKNWRKSTFYTETGEAILNEKSAASTPEQEKKSPNMQRRE
DDTKILESGNKRRVDFGFSKMVANLRNTNMPVISSPQPNNNNINQCRDCM
EKLNMVKTLQEAISMAEKEITTRDEVIESISEQLRFASSSPTLVEKAPDI
EEAEERELYILKLSRMIKSLNEKVDELTTTIRENERTLEEYEQKERVLKE
MIHAKDNSIIALTNQVFSLEEKETTDVAQDVLIAFEEKPSEMTDSNSSPI
ELDYDQLKEACSAYQAQNNFLNSEILELHKLRTLDAEKILNANDNLEMKE
AEVIKIRSRYLWLLKDCAGPKRETNMESDGVLEKLIDEAINEKADSTTEK
KSPTEIRFADKYGFYDQIEKSDENALESLADHFESLSGDKELGSLEVSHG
VKWENYLVAQGTAPLQKTEELKALVRSGIPHEFRARVWGDLVRLRSDHER
TIAGQGYYANLLKEKKGAYSPSAKQIELDLLRTLPNNKYYDTLESEGISK
LRRILTAYSWHNPAVGYCQGLNRLGAIALLYLDEETAFWCLVAITEHLMP
IDYYSRTLLGAQIDQKVFRDLLDEKCPKLSAHLVSLQFDISLVSFNWFLT
VFVDLFPIELTLRVWDTFLFEGSKVLFRYALSVFKLFEEEFLRFKDPGPM
FNFFRNLPKKKFNIQKICYIAFNTMNPFSRRNVESKRKFYRPILQAQLDE
FEIMREEYKEKREDSISIHDEEPISDDEN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045740	XLOC_045740	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073659	TCONS_00073659	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000195	Rab-GTPase-TBC_dom
IPR001849	PH_domain
IPR011993	PH_dom-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 891..914
None	No IPR available	COILS	Coil	Coil	coord: 360..404
None	No IPR available	COILS	Coil	Coil	coord: 454..474
None	No IPR available	GENE3D	1.10.10.750		coord: 600..640 e-value: 3.7E-7 score: 29.5
None	No IPR available	GENE3D	1.10.8.270		coord: 641..745 e-value: 8.0E-24 score: 83.3
None	No IPR available	GENE3D	1.20.5.50		coord: 284..431 e-value: 4.4E-4 score: 19.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 909..929
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..44
None	No IPR available	CDD	cd01265	PH_TBC1D2A	coord: 50..147 e-value: 1.38924E-41 score: 147.469
IPR000195	Rab-GTPase-TBC domain	SMART	SM00164	tbc_4	coord: 625..845 e-value: 5.5E-64 score: 228.6
IPR000195	Rab-GTPase-TBC domain	PFAM	PF00566	RabGAP-TBC	coord: 632..842 e-value: 3.6E-55 score: 186.8
IPR000195	Rab-GTPase-TBC domain	PROSITE	PS50086	TBC_RABGAP	coord: 628..822 score: 36.988
IPR000195	Rab-GTPase-TBC domain	SUPERFAMILY	47923	Ypt/Rab-GAP domain of gyp1p	coord: 603..782
IPR000195	Rab-GTPase-TBC domain	SUPERFAMILY	47923	Ypt/Rab-GAP domain of gyp1p	coord: 760..875
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 49..145 e-value: 6.9E-12 score: 55.5
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 52..140 e-value: 1.6E-9 score: 38.1
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 48..143 score: 12.847
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 42..159 e-value: 7.8E-20 score: 70.3
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 48..140

Blast

[Close]

BLAST of TCONS_00073659-protein vs. Swiss-Prot (Human)
Match: TBD2B (TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2)

HSP 1 Score: 448.743 bits (1153), Expect = 1.217e-142
Identity = 320/972 (32.92%), Postives = 495/972 (50.93%), Query Frame = 0

Query:   50 RLCGYLNKM-GAGIIKGWKKRWFVYDPRRCLLFYYRRPQDTEPLGTIDIASATFSYN-------PNVK--ALFSISSGDRLYQLEAPDNNAMMFWLQELQAKRREFSKLVEANAGNNR--PTSGLLSDPIDAPQGGDDEADGFNKIIERPHNV-----------GEKTA-------LDSKGNFSFTHLNKEFKNW-------------RKSTFYT------------ETGEAILNEKSAASTPEQEKKSPNMQRREDDTKILESGNKRRVDFG---------FSKMVANLRNTNMPVISSPQPNNNNINQ-----CRDCMEKLNM-VKTLQEAISMAEKEITTRDEVIESISEQLRFAS-----SSPTLVEKAPD--IEEAEERELYILKLSRMIKSLNEKVDELTTTIRENERTLEEYEQKERVLKEMIHAKDNSIIALTNQVFSLEEKETTDVAQDVLIAFEEKPSEMTDSNSSPIELDYDQLKEACSAYQAQNNFLNSEILELHKLRTLDAEKILNANDNLEMKEAEVIKIRSRYLWLLKD-----CA---GPKRETNMESDGVLEKLIDEAINEKADSTTEKK--SPTEIRFADKYGFYDQIEKSDENALESLADHFESLSGDKELGSL------EVSHGVKWENYLVAQGTAPLQKTEELKALVRSGIPHEFRARVWGDLVRLRSDHERTIAGQGYYANLLKEKKGAYSPSAKQIELDLLRTLPNNKYYDTLESEGISKLRRILTAYSWHNPAVGYCQGLNRLGAIALLYLDEETAFWCLVAITEHLMPIDYYSRTLLGAQIDQKVFRDLLDEKCPKLSAHLVSLQFDISLVSFNWFLTVFVDLFPIELTLRVWDTFLFEGSKVLFRYALSVFKLFEEEFLRFKDPGPMFNFFRNLPKKKFNIQKICYIAFNTMNPFSRRNVESKRKFYRPILQAQLDEFEIMREEYKEKREDSISIHDEEPISDDE 928
            RLCGYL K+ G G ++G++ RWFV+D RRC L+Y++ PQD  PLG +DIA A FSY        P  +  A F + S   +  L+AP+   M +WLQELQ KR E+   ++    ++R  PT G     + A    D      N   E+  NV           GE+ A        +S   +S      E KN              R++ FYT            +  E+I+ E+    TPE  K                +G+    DFG            ++ + +N +    SS  P++   +       R    ++ + V++ QE +   +K+++++ E++  + + +R +      +S  L E  P   +E   +++  IL L+  ++  + + + L   +R  +  + E  ++  +L E I AKD  II L+       E E       V       PS  +    +  +L+ D+LK+    Y+ QN FLN EILEL  LR     +  +        EA++ +I S+YL LL++     C+   GP RE       V+ +L+++A+  ++    E+    P  +   D YGF    E  +E   E L     +L    +L +L      EVS GVKWENY  +     +  + ELK L+R+GIPHE R++VW   V   +   +     G++  LL++     +P++KQIELDLLRTLPNNK+Y    SEGI KLR +L A+SW NP +GYCQGLNRL A+ALLYL++E AFWCLV I E  MP DYY++TLLG+Q+DQ+VFRDL+ EK P+L  H    + D +L++FNWFL VFVD    ++  ++WD+FL+EG KV+FR+AL++FK  EEE L+ +D   +F + R   +   + +K+  I+F  +NPF  R + ++R ++   ++ +L E E +RE++   RE   S    E +SD+E
Sbjct:   36 RLCGYLQKLSGKGPLRGYRSRWFVFDARRCYLYYFKSPQDALPLGHLDIADACFSYQGPDEAAEPGTEPPAHFQVHSAGAVTVLKAPNRQLMTYWLQELQQKRWEYCNSLDMVKWDSRTSPTPGDFPKGLVARDNTDLIYPHPNASAEKARNVLAVETVPGELVGEQAANQPAPGHPNSINFYSLKQWGNELKNSMSSFRPGRGHNDSRRTVFYTNEEWELLDPTPKDLEESIVQEEKKKLTPEGNKGV--------------TGSGFPFDFGRNPYKGKRPLKDIIGSYKNRH----SSGDPSSEGTSGSGSVSIRKPASEMQLQVQSQQEELEQLKKDLSSQKELVRLLQQTVRSSQYDKYFTSSRLCEGVPKDTLELLHQKDDQILGLTSQLERFSLEKESLQQEVRTLKSKVGELNEQLGMLMETIQAKDEVIIKLS-------EGEGNGPPPTV------APSSPSVVPVARDQLELDRLKDNLQGYKTQNKFLNKEILELSALRRNAERRERDLMAKYSSLEAKLCQIESKYLILLQEMKTPVCSEDQGPTRE-------VIAQLLEDALQVESQEQPEQAFVKPHLVSEYDIYGFRTVPEDDEE---EKLVAKVRAL----DLKTLYLTENQEVSTGVKWENYFASTVNREMMCSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDNTEPGHFQTLLQKALEKQNPASKQIELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLISISFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDF--LRERDTSPDKGELVSDEE 960

The following BLAST results are available for this feature:

BLAST of TCONS_00073659-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073659-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TBD2B	1.217e-142	32.92	TBC1 domain family member 2B OS=Homo sapiens GN=TB...	[more]

You are here

TCONS_00073659-protein (polypeptide) - C. hemisphaerica