TCONS_00073657-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073657-protein
Unique NameTCONS_00073657-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length452

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073657-protein ID=TCONS_00073657-protein|Name=TCONS_00073657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=452bp
MHFSIPETVQASEENGSKFWNFHIHVNGVFHCKLRYSQLDKFYEQLKNDF
PGRIQSRLFPGKKLFSLSPDQLEERRDMLEKFIQHISQDPVIGVSDQFND
FFVKAQQAGLDIPSENVSLDVFLMNGNKVTLEISTTDQTDDVLEAAMTKI
GLQEKFYYYFALFFVRKEDNGGGIRIVRKLQDFESPYLSLKAVTKPHRII
IRKNYWSPSYDDDLLEDRIAMNLLYVQITDDLDRGWMLCSDEQKKRMKKL
QNQGSRKDVLRLARDFKFYGFLHYSPCTSDYPDPDSSALIASGDRELNIR
VSKENDTKVMEGRFKVQRIRSWRLTSLPGDDDASKEKLQFAFEYLFGKDE
LRWVTIESDQAIMMSMALQGIVDEILREKRGQGIRLPRKKEKKDPNDTSS
SSISGQSSNSTTNRSFLIRSSSQDKKSKRSDKNKGIGVNEDFAAGNIGDD
DL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045739XLOC_045739Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073657TCONS_00073657Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR000159RA_dom
IPR000299FERM_domain
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 1..105
e-value: 2.6E-14
score: 63.5
IPR001683Phox homologous domainPFAMPF00787PXcoord: 13..103
e-value: 4.4E-13
score: 49.1
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 1..114
e-value: 9.3E-17
score: 60.6
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..109
score: 12.289
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 3..102
NoneNo IPR availableGENE3D3.10.20.90coord: 115..207
e-value: 4.1E-30
score: 103.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..452
NoneNo IPR availableCDDcd13337FERM-like_C_SNX17coord: 269..380
e-value: 2.59229E-46
score: 156.353
IPR000159Ras-associating (RA) domainPROSITEPS50200RAcoord: 115..206
score: 9.535
IPR000299FERM domainPROSITEPS50057FERM_3coord: 117..452
score: 10.232

Blast
[Close]
BLAST of TCONS_00073657-protein vs. Swiss-Prot (Human)
Match: SNX17 (Sorting nexin-17 OS=Homo sapiens GN=SNX17 PE=1 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 5.558e-127
Identity = 199/481 (41.37%), Postives = 305/481 (63.41%), Query Frame = 0 
Query:    1 MHFSIPET-VQASEENGSKFWNFHIHVNGVFHCKLRYSQLDKFYEQLKNDFPGRIQSRLFPGKKLFSLSPDQLEERRDMLEKFIQHISQDPVIGVSDQFNDFFVKAQQAGLDIPSENVSLDVFLMNGNKVTLEISTTDQTDDVLEAAMTKIGLQEKFYYYFALFFVRKEDNGGGIRIVRKLQDFESPYLSLKAV-TKPHRIIIRKNYWSPSYDDDLLEDRIAMNLLYVQITDDLDRGWMLCSDEQKKRMKKLQNQGSRKDVLRLARDFKFYGFLHYSPCTSDYPDPDSSALIASGDRELNIRVSKENDTKVMEGRFKVQRIRSWRLTS---LPGDDDAS------KEKLQFAFEYLFGKDELRWVTIESDQAIMMSMALQGIVDEILREKRGQGIRLPRKKEKKDPNDTSSSSISGQSSNS--------TTNRSFLIRSSSQDKKSKRSDKNKGIG----------VNEDFAAGNIGDDDL 452
            MHFSIPET  ++ +  GS +  ++IHVNGV HC++RYSQL   +EQL+ ++   +    FP KKLFSL+P ++E+RR+ LEK++Q + QDP++G S+ FN F  +AQQ    +P+E VSL+V L NG KV + + T+DQT+DVLEA   K+ L +    YF+LF VR++++ G    VRKLQ+FE PY+S+ ++ ++ ++I++RK+YW  +YDDD++E+R+ +NLLY Q   D++RGW+L + EQ +++K LQ + S+K+ LRLA+  + YG+L +  C +D+P+ D   ++++G+ EL++++ +    ++ EG F+V R+R WR+TS   LP    +S      + +L+ AFEYL  KD L+WVTI S QAIMMS+ LQ +VDE++ +K G  I   RK  ++    T   S S Q+  S         T  S +  SS     S R     GIG          V+ +FA   IGD+DL
Sbjct:    1 MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLP-AFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKED-GAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQL-RLPGQQLREGSFRVTRMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSI---RKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLR-----GIGSPSTDASASDVHGNFAFEGIGDEDL 470
The following BLAST results are available for this feature:
BLAST of TCONS_00073657-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX175.558e-12741.37Sorting nexin-17 OS=Homo sapiens GN=SNX17 PE=1 SV=... [more]
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