TCONS_00073541-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073541-protein
Unique NameTCONS_00073541-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073541-protein ID=TCONS_00073541-protein|Name=TCONS_00073541-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
ERPFLVYRTKFDIRQWFLVTDWNPLVIWFYQDCYVRFCSQEFTLDKFDPQ
VHLSNNSIQKHYRNGIRSDKLPDSNMWSSDEFKTYLQTIGKDTSWDSKIY
PGMKSAIIGALQCCQTSLEYRRNSFELYGADFMLSENLDPWLIEINSSPA
LGASTPVTKELCRNVIEDTLKVVLDRRENKQADVGRFELAFRQPYIAPPS
YMGCNVYIEGKQISKPKVAKAPEPKIELKKSDDNCDDTGKEEESMVAVRT
DIKKVKSKETCENVKTKTTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045647XLOC_045647Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073541TCONS_00073541Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.20coord: 3..265
e-value: 2.7E-14
score: 52.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..244
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 10..35
coord: 91..174
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 1..177
e-value: 1.7E-56
score: 191.4
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePROSITEPS51221TTLcoord: 1..185
score: 23.502

Blast
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BLAST of TCONS_00073541-protein vs. Swiss-Prot (Human)
Match: TTLL3 (Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTLL3 PE=1 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 2.422e-79
Identity = 115/217 (53.00%), Postives = 147/217 (67.74%), Query Frame = 0 
Query:    1 ERPFLVYRTKFDIRQWFLVTDWNPLVIWFYQDCYVRFCSQEFTLDKFDPQVHLSNNSIQKHYRNGI-RSDKLPDSNMWSSDEFKTYLQTIGKDTSWDSKIYPGMKSAIIGALQCCQTSLEYRRNSFELYGADFMLSENLDPWLIEINSSPALGASTPVTKELCRNVIEDTLKVVLDRRENKQADVGRFELAFRQPYIAPPSYMGCNVYIEGKQISKP 216
            ERP L++ TKFD+RQWFLVTDWNPL +WFY+D Y+RF +Q F+L   D  VHL NNSIQKH  N   R   LP  NMWSS  F+ +LQ +G   +W + I PGMK A+I ALQ  Q +++ R+ SFELYGADF+  E+  PWLIEIN+SP +  ST VT  LC  V  DTL+VV+DR  ++  D G FEL ++QP +  P Y+G  + +EG  I KP
Sbjct:  325 ERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHRHPLLPPDNMWSSQRFQAHLQEMGAPNAWSTIIVPGMKDAVIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVVIDRMLDRNCDTGAFELIYKQPAVEVPQYVGIRLLVEGFTIKKP 541
The following BLAST results are available for this feature:
BLAST of TCONS_00073541-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTLL32.422e-7953.00Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTL... [more]
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