TCONS_00073521-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073521-protein
Unique Name	TCONS_00073521-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	680

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073521-protein ID=TCONS_00073521-protein|Name=TCONS_00073521-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
MIFNVMSVPKTGILTLILKGLVYFYVEKRLAXYIDANTERARLLLRRETS
RSESSIYHEDEDGISSHTSSNASDSLQGLHSDSTLESHQRIQGSASFSHK
KRQQQQQRKGHSRSKSDQIGIHHNQHHNTISMMNQMNMELSLPGVSLSLP
KEMDTTDGLSSSQQSHSPGYYRYDDVQLVPRPYEGQSLFSYLDSRNYDTG
AQLDKENAHFSICEALITAIEEMRCQRFDRMSSKRRRTILNNDNDLAYDS
GSTSVLSDVTASSGASSCHNKSSATLPSSSDALTDDACISDSAFPTMADQ
RRSIGMSWENVSVSPRRLKREISESEKPEIIQSEEIPPNDFSAEAVAKSL
LHKFQGHKLPAASELKWIVSELEAPQELLPLPTAWPISPDSHLTDNPPER
HVQSGMGKSMPSLLRGNFEWAPPRLQIIFVPHPFVKRKVMLQRQHYRCAG
CGLKVSPDLSKRFRYCEYLGKYFCTSCHQKAESVIPAKILSKWDFKRYFV
SDFARDLLKKIHRDPLFNVHDISPNLYDRVRPLNTTKNLRVQLHYMKKFL
DSCRYAESCQKEVMKLPMHISDDPHVYSIDDLIQVKNGELHKTLSGVITR
GDKHIKEDCQVCQLKGFICEVCSSDEILYPFELRKVHVCQSCKTCSHRSC
YVKGSCKRCERIKARKLLVQADLPESPELE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045635	XLOC_045635	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073521	TCONS_00073521	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025258	Zf-RING_9

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025258	Putative zinc-RING and/or ribbon	SMART	SM01175	DUF4206_2	coord: 464..666 e-value: 2.3E-99 score: 346.1
IPR025258	Putative zinc-RING and/or ribbon	PFAM	PF13901	zf-RING_9	coord: 464..663 e-value: 4.2E-64 score: 216.2

Blast

[Close]

BLAST of TCONS_00073521-protein vs. Swiss-Prot (Human)
Match: RUBIC (Run domain Beclin-1-interacting and cysteine-rich domain-containing protein OS=Homo sapiens GN=RUBCN PE=1 SV=4)

HSP 1 Score: 352.058 bits (902), Expect = 5.493e-109
Identity = 161/326 (49.39%), Postives = 221/326 (67.79%), Query Frame = 0

Query:  342 SAEAVAKSLLHKFQGHKLPAASELKWIVSELEAPQELLPLPTAWPISPDSHLTDNPPERHVQSGMGKSMPSLLRGNFEWAPPRLQIIFVPHPFVKRKVMLQRQHYRCAGCGLKVSPDLSKRFRYCEYLGKYFCTSCHQKAESVIPAKILSKWDFKRYFVSDFARDLLKKIHRDPLFNVHDISPNLYDRVRPLNTTKNLRVQLHYMKKFLDSCRYAESCQKEVMKLPMHISDDPHVYSIDDLIQVKNGELHKTLSGVITRGDKHIKEDCQVCQLKGFICEVC-SSDEILYPFELRKVHVCQSCKTCSHRSCYVKGSCKRCERIKARK 666
            SAEAVA  LL +F+G +LPAASEL+W+V E +APQ+LLP+P + PISPD     +  +  ++          +RGN EWAPPR QIIF  HP   RK+ + +Q+YRCAGCG++  PD  KR RYCEYLGKYFC  CH+ A+  IP+++L KWDF +Y+VS+F++DLL KI  DPLFNV DI+  LY +V+ LN  + LRVQL +MK    +CR A+        +P H+++D H+YS++DL   + GEL   L+ +   G  H+ E C +CQ KGFICE C + D+I++PFEL K   C+ CK C H++C+  GSC RCER++AR+
Sbjct:  625 SAEAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGQHADIYKLRIR----------VRGNLEWAPPRPQIIFNVHPAPTRKIAVAKQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQMAIPSRVLRKWDFSKYYVSNFSKDLLIKIWNDPLFNVQDINSALYRKVKLLNQVRLLRVQLCHMKNMFKTCRLAKELLDSFDTVPGHLTEDLHLYSLNDLTATRKGELGPRLAELTRAGATHV-ERCMLCQAKGFICEFCQNEDDIIFPFELHKCRTCEECKACYHKACFKSGSCPRCERLQARR 939

The following BLAST results are available for this feature:

BLAST of TCONS_00073521-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073521-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RUBIC	5.493e-109	49.39	Run domain Beclin-1-interacting and cysteine-rich ...	[more]

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TCONS_00073521-protein (polypeptide) - C. hemisphaerica