TCONS_00073445-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073445-protein
Unique NameTCONS_00073445-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length577

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073445-protein ID=TCONS_00073445-protein|Name=TCONS_00073445-protein|organism=Clytia hemisphaerica|type=polypeptide|length=577bp
QRFIWPKKKYRSIKNMQVTRIKVRELCLLLCLLSLCLIMVVRYRAPEDKK
QIRKKRAQHVIPQDKPVPPRYSGKLNSPGDLLIDLERKILLKNEVSNAIS
DREAENEKRMSQLESKLFQRLNIIESKVNRNEDLLLEIDRLLKTKSKVNE
PKPPATKIKLQTRDFSIMYEIHKKVWNKLTESEIKEFYNRERISHLKYNK
RILDIERDRHLLMELFPGPDESRDRVTDQLMVKIKVNTTKTIFVSGSNVN
NQKKFQADQCNVDKCFITSNPKYASVADALYVEHKMPYRFLREKNINKNR
VNMVFQLESSRNYPSISILPDGLNWTASYRVDSVLYAPYERFTSFLNVTE
LPTKPKENYAKGKTKMAAWYVSNCGAASGRKNYVKELQKYISVDIYGRCG
KPCPKNNKKCYDQLNNDYKFYLAFENSNCKDYFTEKVYWNGLFYRIIPVV
FGAHPDEYKRIVPPHSYIHTDQFASPKELAEYLIFLDQHDDLYNQYFLWK
DTGSFINTKFMCRMCTMVHLAPHFPMWYSDANNWWRSKDNCVDPTKNGDG
VSYGTWRNKPLPKQHSNFVKYGYKRYG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045585XLOC_045585Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073445TCONS_00073445Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..144
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 256..536
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 239..339
e-value: 3.8E-9
score: 36.9
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 363..535
e-value: 1.0E-57
score: 194.6

Blast
[Close]
BLAST of TCONS_00073445-protein vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 8.694e-39
Identity = 94/258 (36.43%), Postives = 131/258 (50.78%), Query Frame = 0 
Query:  265 CFITSNPKYASVADALYVEHKM----PYRFLREKNINKNRVNMVFQLESSRNYPSISILPDGLNWTASYRVDSVLYAPYERFTSFLNVTELPTKPKENYAKGKTKMAAWYVSNCGAASGRKNYVKELQKYISVDIYGRCGKPCPKNNKKCYDQLNNDYKFYLAFENSNCKDYFTEKVYWNGLFYRIIPVVFGAHPDEYKRIVPPHSYIHTDQFASPKELAEYLIFLDQHDDLYNQYFLWKDT---GSFINTKFMCRMC 515
            C IT++ K    ADA+ V H+     P   L      + +  + F +ES  +   +  +    N T SYR DS ++ PY     +   +  P  P  N +  KT++ AW VSN G  S R  Y + LQ ++ VD+YGR  KP P+       +  + YKFYLAFENS   DY TEK++ N L    +PVV G     Y+R +PP ++IH D F SPK+LA YL  LD+    Y  YF W++T    SF      C+ C
Sbjct:   90 CNITADRKVYPQADAVIVHHREVMYNPSAQLPRSPRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLEPW---SGQPAHPPLNLS-AKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHKPLPQGTMM---ETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKAC 340
The following BLAST results are available for this feature:
BLAST of TCONS_00073445-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT68.694e-3936.43Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens G... [more]
back to top