TCONS_00073245-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073245-protein
Unique NameTCONS_00073245-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1247

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073245-protein ID=TCONS_00073245-protein|Name=TCONS_00073245-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1247bp
MVISDLIVVSNYLVVILKQKVGFVENDSVKNVLLVFSIISNDKQVTEIKL
VNSRTLHGTTIQDAVYVPCSSAPSNILENLIALEQFEENTDCAVSEPNLD
KSLLLIALSDNSLSFMTVPRLVEKKLLTNIENNGIHKIVYCGPLSSVAIC
DTKGHLHIQSCVDGNLTKPSSKTLEKYSGQWPETFTIKQLEWLTAMIKFQ
VVTQGCYLLHPVNWSFNKGNVINCNMKPNAHLKNMFHLTPMETDNRFIKR
TSLATQKSDLVFNMFVMVKTFVGYVDIIVNLKSPLPDDDQDFEFSIYITS
ENTEDGISTNENRQESQDRSNGNNKKIYGPISFKSVMNSSKTSATFTIVS
PELLVEKSFPMLIKLSTVTQPTTDSEPLQLSTIIKDLYVGVYQFKNVADQ
CGLYFDGCQHALATEESIQRSLVRQLLDLVKNNAGMREGGPVKMIVSLLL
WAVSVHSRRIDTTVSLPLVEIIQEHLSPLLHALLYYGDRSICHSCCLLFV
ALNRQNVDGTFARRVLDILWTLLPKIQNARSSAATNWVFVMLLDFLDNCG
PENNMVGNDALPAFTEMLLKSSKLYADGFTEIQKVFDTKFGCPDMVFEPT
LVDPMNVKLKSGNATKMGNCHVLETVKISTDHLPGILEVLPLKFVCLSVS
EGSKFDQIKSSTATSVKWNHKMSEAAAPSTFPLNNANPFAQNNFPSDSLL
GGPMQPMNLSAIAKAKALNAMKHGDEESHIFDDLMGQITGFLGSEGGFGT
GKPLLTKDGSGATGGKHNRGETFNAAGVADENVIPNPCCLLVDKMHVYSV
HYAIIDFKVPIYLTDLVIPPCKALSSITLTSWENDQDPEDGQVVASSEVI
NKHALVISNLVQPVKLRFLKIVVIGGESCSVVIPLGQYYGYPVHENTNSL
ELVQQQYSDLFCRFSLAVDRLVKPLSNRVQLTSSKSGSSKHVNVTLGNTK
KDIVLCSHIQRCLNILSNHLNVDQLLHDQNIESVVPVKESTFSSQQLMLH
CLLKAIDIYISSKDRPKPCNHQLITKDQFLDLFSQLCVYGMTNIQETATK
VLHQVCSSEEWWEDGLIEIYRKVFQYNSVVPIPKKRVFSTLMKLMKSSKR
LNIIVEKLLQQLKEYLKSDGLVINPNSLDWLLLALDYLLDSPDIKDWSFF
NPLGNNLSNQPETPTSPILKLADIFPDPSVTQTTSQATPSPQQEPTSPTE
PNISKEITGQVFLPKPICIDVTKAILGYLISKLDTGNRDQLILCSKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045440XLOC_045440Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073245TCONS_00073245Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 406..1159
e-value: 2.9E-7
score: 28.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1179..1203
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 441..570
coord: 945..1138

Blast
[Close]
BLAST of TCONS_00073245-protein vs. Swiss-Prot (Human)
Match: BIRC6 (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.798e-19
Identity = 107/443 (24.15%), Postives = 195/443 (44.02%), Query Frame = 0 
Query:  790 LLVDKMHVYSVHYAIIDFKVPIYLTDLVIPPCKALSSITLTSWENDQDPEDGQVVASSEVINKHALVISNLVQPVKLRFLKIVVIG---GESCSVVIPLGQYYGYP-----------VH-------ENTNSLELVQQQY------SDLFCRFSLAVDRL--------VKPL--SNRVQLTSSKSGSSKHVNVTLGNTKKDIVLCSHIQRCLNILSNHL---------NVDQLLHDQNIESVVPVKESTFSSQQLMLHCLLKAIDIYISSKDRPKPCNHQLITKDQFLD-LFSQLCVYGMTNIQETATKVLHQVCSSEEWWEDGLIEIYRKVFQYNSVVPIPKKRVFSTLMKLMKSSKRLNIIVEKLLQ-----------QLKEYLKSDGLVINPNSLDWLLLALDYLLDS-PDIKD-------------WSFFNPLGNNLSNQ 1160
            +++++MH  +  +  +DF  PI LTD++IP C  L+S+++  W   ++ +  ++V +++ I+ H+L++ +L+ P   RF+KI VIG     +    IPLG YYG+            +H       E+ N  E+ Q          D+ CR++LA  RL        + PL  +N  Q    K   +   +  + +  +D   C  +Q  LN+  N +         +   L    N E ++    ST   + ++ + L   + +  +S     P   Q     Q  + LF  LC+ G   I+     +L Q+C  E WW   L  + ++++    ++  P+ RVF  L  + + S   + ++E LL            QL  + +++G++  P  + W+++ +  LLD    ++D             WSF N   NNL  Q
Sbjct: 1778 IIIERMHSGARRFVTLDFGRPILLTDVLIPTCGDLASLSIDIWTLGEEVDGRRLVVATD-ISTHSLILHDLIPPPVCRFMKITVIGRYGSTNARAKIPLGFYYGHTYILPWESELKLMHDPLKGEGESANQPEIDQHLAMMVALQEDIQCRYNLACHRLETLLQSIDLPPLNSANNAQYFLRKPDKAVEEDSRVFSAYQD---CIQLQLQLNLAHNAVQRLKVALGASRKMLSETSNPEDLIQTS-STEQLRTIIRYLLDTLLSLLHASNGHSVPAVLQSTFHAQACEELFKHLCISGTPKIRLHTGLLLVQLCGGERWWGQFLSNVLQELYNSEQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLSPLQPQLPMHRRTEGVLDIP-MISWVVMLVSRLLDYVATVEDEAAAAKKPLNGNQWSFIN---NNLHTQ 2211
The following BLAST results are available for this feature:
BLAST of TCONS_00073245-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BIRC62.798e-1924.15Baculoviral IAP repeat-containing protein 6 OS=Hom... [more]
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