TCONS_00073227-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073227-protein
Unique NameTCONS_00073227-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073227-protein ID=TCONS_00073227-protein|Name=TCONS_00073227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=125bp
MIPNLAYVFPYCGLNFLFYGLLNRTWNLLQFRESSVKSLTCGTISGIFAK
ALLLPIDNVKKRLQVQGSKDFQSSYKGMVNCLQTVIREQGIHALYRGIVP
SVLKTGLATGISFFVYEETCKLLSK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045423XLOC_045423Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073227TCONS_00073227Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 1..123
e-value: 1.6E-30
score: 105.4
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 2..117
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 34..125
e-value: 1.4E-23
score: 82.5
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 33..122
score: 25.538

Blast
BLAST of TCONS_00073227-protein vs. Swiss-Prot (Human)
Match: TPC (Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.318e-20
Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    1 MIPNLAYVFPYCGLNFLFYGLLNR--TWNLLQF--RESSVKSLTCGTISGIFAKALLLPIDNVKKRLQVQGSKDFQSS------YKGMVNCLQTVIREQGIHALYRGIVPSVLKTGLATGISFFVYEETCKLL 123
            + P L  +FPY GL F  Y  L     W +     +  ++++L CG+ +G+ +K L  P+D  KKRLQV G +  +++      YKG+++C + V++++G    ++G+ PS+LK  L+TG  FF YE  C + 
Sbjct:  178 LAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVF 310          
The following BLAST results are available for this feature:
BLAST of TCONS_00073227-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPC1.318e-2033.83Mitochondrial thiamine pyrophosphate carrier OS=Ho... [more]
back to top