TCONS_00073207-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073207-protein
Unique Name	TCONS_00073207-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	916

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073207-protein ID=TCONS_00073207-protein|Name=TCONS_00073207-protein|organism=Clytia hemisphaerica|type=polypeptide|length=916bp
VGNVQSVKFIDNDTFPITGLVSIRKDRYGRVSKTGTIMIEALRFAIRQVN
QKNRKFLHGYRFGFNRFHDISDTKVYEISDIVKDLFLEDYLFLVGPHSSE
TSYVTDLLSVPFGISVISYGATFSDFPRVSGESSYTYRTVPSNTFRIQAL
VDVVKTLRWNYVSIISSYGYDGERDARYFTQEIIKMKICLGNIYDLPRNT
KQQRYKDILEAVDEDESAHVLLLFTNIKDSMNILKAVTKLKLEKRFLLFC
VLGCLHYDEVIRGNEEAAFGMLSLDLYNYPNPQFEEYFKALTPGKRNKSY
FRNFWEQHFNCVLNASAPNNFKRPTCTGNEKMTDVEFLKDMSTHTIISAV
YAFACATRSIVQKYCGVNHEGGSKTCSQGLYPSSTEKYFEKVFESLKNVT
FNDGTLDLHRAFANVNYNATDFGDFKDISKYVRYDVFYYGNENKNILIGQ
WKKRRVRNRKRGFSSTTGSSLSNFFLGVQENDERFKSSLNLMNSHIVKNL
TNIVCSPPCKPGHYRVPYANFAKRSCCFTCSPCPEHHISINGTCSQCAMT
EKQVNNQCVMLPQIWIGVLSDIPSIVFSFLSVLGAISVVFVALIFVRFND
HKLVRASGRDLFYIMLFGIFLTFIIPFTVLTKPSSAACVARGILPGLAFL
TCYAPLFLKTNRIYRIFLHGKRTTQPPNLISPQSQIVILCGITAVQILLS
SVFFASKTPDPELEVNPERTRILLKCKGDSSPILMLLNLIISVVFMVSCT
FLAFKTRHFPKNFNEAKDIGVTLYITCVIWSVFLPAFFLTVPWRLEFVRE
YLMSGLAIVLGYTTLFGLFGRKLKILFTGDKADDSVTSKEHKNVCNSVVS
RFTSIRHRIYSETPSNHTSNNGVKFKMILNDSKSECSSENNNDCESTNCR
TDVDTANESVVETTET

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045410	XLOC_045410	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073207	TCONS_00073207	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C
IPR001828	ANF_lig-bd_rcpt
IPR011500	GPCR_3_9-Cys_dom
IPR028082	Peripla_BP_I
IPR009030	Growth_fac_rcpt_

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 146..162 score: 41.91 coord: 741..764 score: 45.18 coord: 35..50 score: 33.98 coord: 764..785 score: 53.84 coord: 162..179 score: 31.77 coord: 601..623 score: 45.24 coord: 646..667 score: 48.01 coord: 685..708 score: 21.74
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 587..823 e-value: 1.2E-45 score: 156.1
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 573..827 score: 41.717
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 40..403 e-value: 2.1E-28 score: 99.3
None	No IPR available	GENE3D	3.40.50.2300		coord: 15..408 e-value: 1.9E-30 score: 105.7
IPR011500	GPCR, family 3, nine cysteines domain	PFAM	PF07562	NCD3G	coord: 504..550 e-value: 7.9E-9 score: 35.3
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 29..444
IPR009030	Growth factor receptor cysteine-rich domain	SUPERFAMILY	57184	Growth factor receptor domain	coord: 500..560 coord: 862..896

Blast

[Close]

BLAST of TCONS_00073207-protein vs. Swiss-Prot (Human)
Match: GRM7 (Metabotropic glutamate receptor 7 OS=Homo sapiens GN=GRM7 PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 3.111e-95
Identity = 228/730 (31.23%), Postives = 348/730 (47.67%), Query Frame = 0

Query:   88 EDYLFLVGPHSSETSYVTDLLSVPFGISVISYGATFSDFPRVSGESSYTY--RTVPSNTFRIQALVDVVKTLRWNYVSIISSYGYDGERDARYFTQEIIKMK--ICLGNIYDLPRNTKQQR--YKDILEAVDEDESAHVLLLFTNIKDSMNILKAVTKLKLEKRFLLFCVLGCLHYDEVIRGNEEAAFGMLSLDLYNYPNPQFEEYFKALT-PGKRNKSYFRNFWEQHFNCVL--NASAPNNFKRPTCTGNEKM-TDVEFLKDMSTHTIISAVYAFACATRSIVQKYCGVNHEGGSKTCSQGLYPSSTEKYFEKVFESLKNVTFNDGTLDLHRAFANVNYNATDFGDFKDISKYVRYDVFYYGNENKN----ILIGQWKKRRVRNRKRGFSSTTGSSLSNFFLGVQENDERFKSSLNLMNSHIVKNLTNIVCSPPCKPGHYRVPYANFAKRSCCFTCSPCPEHHISING-TCSQCAMTEKQVNNQ--CVMLPQI---WIGVLSDIPSIVFSFLSVLGAISVVFVALIFVRFNDHKLVRASGRDLFYIMLFGIFLTFIIPFTVLTKPSSAACVARGILPGLAFLTCYAPLFLKTNRIYRIFLHGKRTTQPPNLISPQSQIVILCGITAVQILLSSVFFASKTP------DPELEVNPERTRILLKCKGDSSPILMLLNLIISVVFMVSCTFLAFKTRHFPKNFNEAKDIGVTLYITCVIWSVFLPAFFLTV 791
            E  + ++G   S  S +   +   F I  ISY +T    P +S +  Y +  R VP ++F+ QA+VD+VK L WNYVS ++S G  GE+    FTQ I K    +C+     +P+  K +   +  I++ + +  ++  +++F N +D   IL A  +      FL             +  +E+ A G +++         F+ YF + T    R   +F  +WE++FNC L  + S   +  R  CTG E++  D  + ++     +I AVYA A A   + +  C            +G+ P   +   +K+ + ++NV FN        A   V +N    GD        RYD+F Y   N +     LIGQW                              DE   +  ++     V+ +   VC+ PCKPG  +          CC+TC PC  +    +  TC  C   ++   N+  C  +P I   W    + IP     FL++LG I+ +FV   F+R+ND  +VRASGR+L Y++L GIFL +II F ++ KP  A C  R +  GL     YA L  KTNRIYRIF  GK++   P LISP SQ+ I   + +VQ+L   ++F    P      D    +NPE+ R +LKC  D + + ++ +L  S++ MV+CT  A KTR  P+NFNEAK IG T+Y TC++W  F+P FF T 
Sbjct:  148 EKVVGVIGASGSSVSIMVANILRLFQIPQISYASTA---PELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVESFTQ-ISKEAGGLCIAQSVRIPQERKDRTIDFDRIIKQLLDTPNSRAVVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDR-KCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCAD---------YRGVCPEMEQAGGKKLLKYIRNVNFNGS------AGTPVMFNKN--GDAPG-----RYDIFQYQTTNTSNPGYRLIGQW-----------------------------TDELQLNIEDMQWGKGVREIPASVCTLPCKPGQRK---KTQKGTPCCWTCEPCDGYQYQFDEMTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPV----FLAMLGIIATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAITSSLISVQLLGVFIWFGVDPPNIIIDYDEHKTMNPEQARGVLKC--DITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTA 812

The following BLAST results are available for this feature:

BLAST of TCONS_00073207-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073207-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM7	3.111e-95	31.23	Metabotropic glutamate receptor 7 OS=Homo sapiens ...	[more]

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TCONS_00073207-protein (polypeptide) - C. hemisphaerica