TCONS_00073205-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073205-protein
Unique NameTCONS_00073205-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073205-protein ID=TCONS_00073205-protein|Name=TCONS_00073205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MATTLTTIVKRSAKFHPRFTTCRHGSSGSRDFVKIVEVGARDGLQNEKEL
VPTNTKIELIDRLSATGLQTIEATSFVSPKWVPQLADNKELFTKIEKKDG
VSYPVLVPNLKGYQQAVAAGVREIAVFGSASEGFSQKNINCSIEESLKRF
QNVFDASKNDGIRIRGYLSCTVGCPYDGQVAPKQVAKVTESLLEMGCYEV
SLADTIGVGSPESIERMLGEVLAVSRPEVLAIHCHDTNGKAVQNIAKSLD
LGVRVVDSSVGGLGGCPYAKNATGNVSTEKVLQFLSTQGVETGVNLEEIK
EIGEWIRKSLGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045409XLOC_045409Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073205TCONS_00073205Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000891PYR_CT
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 29..312
e-value: 3.7E-101
score: 337.7
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 33..305
e-value: 7.9E-50
score: 169.8
IPR000891Pyruvate carboxyltransferasePROSITEPS50991PYR_CTcoord: 33..300
score: 32.581
NoneNo IPR availableCDDcd07938DRE_TIM_HMGLcoord: 35..308
e-value: 5.55069E-166
score: 464.944
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 31..311

Blast
[Close]
BLAST of TCONS_00073205-protein vs. Swiss-Prot (Human)
Match: HMGC2 (3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Homo sapiens GN=HMGCLL1 PE=1 SV=3)

HSP 1 Score: 350.132 bits (897), Expect = 2.523e-120
Identity = 163/286 (56.99%), Postives = 217/286 (75.87%), Query Frame = 0 
Query:   27 SGSRDFVKIVEVGARDGLQNEKELVPTNTKIELIDRLSATGLQTIEATSFVSPKWVPQLADNKELFTKIEKKDGVSYPVLVPNLKGYQQAVAAGVREIAVFGSASEGFSQKNINCSIEESLKRFQNVFDASKNDGIRIRGYLSCTVGCPYDGQVAPKQVAKVTESLLEMGCYEVSLADTIGVGSPESIERMLGEVLAVSRPEVLAIHCHDTNGKAVQNIAKSLDLGVRVVDSSVGGLGGCPYAKNATGNVSTEKVLQFLSTQGVETGVNLEEIKEIGEWIRKSLGK 312
            SG  +FVKIVEVG RDGLQNEK +VPT+ KIE I+RLS TGL  IE TSFVS +WVPQ+AD+ E+   I +  GV YPVL PNL+G+  AVAAG  EI+VFG+ASE FS+KNINCSIEES+ +F+ V  ++++  I  RGY+SC +GCPY+G + P++V +V++ L  MGCYE+SL DTIGVG+P S++RML  V+    P  LA+HCHDT G+A+ NI  +L +G+ VVDS+V GLGGCPYAK A+GNV+TE ++  L+  G+ TGVNL ++ E G++I K++ K
Sbjct:   72 SGLPEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRWVPQMADHTEVMKGIHQYPGVRYPVLTPNLQGFHHAVAAGATEISVFGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIPARGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYGQALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGLGLNTGVNLYKVMEAGDFICKAVNK 357
The following BLAST results are available for this feature:
BLAST of TCONS_00073205-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMGC22.523e-12056.993-hydroxymethyl-3-methylglutaryl-CoA lyase, cytopl... [more]
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