TCONS_00073201-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073201-protein
Unique NameTCONS_00073201-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length219

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073201-protein ID=TCONS_00073201-protein|Name=TCONS_00073201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
YNMNPEIRNEVELKKQRREEQRIDELKKAGKSKEEIEEALSKYKGKEKEK
KEVIVCHTVQDEQKRKLDRLMSNPNKEVYIPQQRKEWKPRDPAEFVRHVM
GSSAGAGSGEFHVYRNIRKRELKRQEYMEKKTMKEELDEEFQAKMEANKE
KAEDSTNKKRAKRQRRKQKKAMAKKSKKSEDQQEKEQEDSDEEKSDQESE
GEEENNKEPEEPHFIIGGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045408XLOC_045408Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073201TCONS_00073201Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009548DUF1168
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..200
NoneNo IPR availableCOILSCoilCoilcoord: 120..178
NoneNo IPR availableCOILSCoilCoilcoord: 9..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..219
IPR009548Protein of unknown function DUF1168PFAMPF06658DUF1168coord: 74..206
e-value: 4.9E-43
score: 146.1

Blast
[Close]
BLAST of TCONS_00073201-protein vs. Swiss-Prot (Human)
Match: PKRI1 (PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.077e-38
Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 0 
Query:   48 KEKKEVIVCHTVQDEQKRKLDRLMSNPNKEVYIPQQRKEWKPRDPAEFVRHVMGSSAGAGSGEFHVYRNIRKRELKRQEYMEKKTMKEELDEEFQAKMEANKEKAEDST 156
            KE + +++     +EQK KL+RLM NP+K V IP++  EW PR P EFVR VMGSSAGAGSGEFHVYR++R+RE +RQ+YM+    K++LD EFQ ++E NK  AE+ T
Sbjct:   16 KEPQTLVIPKNAAEEQKLKLERLMKNPDKAVPIPEKMSEWAPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQT 124
The following BLAST results are available for this feature:
BLAST of TCONS_00073201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKRI11.077e-3855.96PRKR-interacting protein 1 OS=Homo sapiens GN=PRKR... [more]
back to top